Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SF3A2

Gene Name Gene ID Reads Annotation
SF3A2 ENSGALG00000021679 12580 splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]











Genes with expression patterns similar to SF3A2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SF3A2 ENSGALG00000021679 12580 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
2. TXNL1 ENSGALG00000033862 13899 1.664 - - - - - - 0.807 0.857 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
3. MYCL ENSGALG00000024047 10367 1.661 - - - - - - 0.806 0.855 - - MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
4. TRAF7 ENSGALG00000005767 4615 1.643 - - - - - - 0.764 0.879 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
5. CBLL1 ENSGALG00000038981 6725 1.634 - - - - - - 0.815 0.819 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
6. THOP1 ENSGALG00000041934 10122 1.613 - - - - - - 0.807 0.806 - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
7. SRP68 ENSGALG00000002062 7370 1.605 - - - - - - 0.778 0.827 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
8. MED17 ENSGALG00000017218 5821 1.599 - - - - - - 0.850 0.749 - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
9. FBXO3 ENSGALG00000034029 15089 1.583 - - - - - - 0.769 0.814 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
10. SEC24C ENSGALG00000005181 11132 1.573 - - - - - - 0.754 0.819 - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
11. AGFG1 ENSGALG00000003052 4766 1.552 - - - - - - 0.767 0.785 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
12. ENSGALG00000005727 ENSGALG00000005727 4334 1.541 - - - - - - 0.741 0.800 - -
13. MRPL53 ENSGALG00000037867 6100 1.538 - - - - - - 0.749 0.789 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
14. TMLHE ENSGALG00000007443 3619 1.531 - - - - - - 0.734 0.797 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
15. TMEM8A ENSGALG00000026188 3092 1.53 - - - - - - 0.760 0.770 - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
16. SACS ENSGALG00000017120 4906 1.527 - - - - - - 0.731 0.796 - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
17. PLEKHB2 ENSGALG00000002169 3832 1.523 - - - - - - 0.803 0.720 - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
18. SALL4 ENSGALG00000041365 6760 1.518 - - - - - - 0.756 0.762 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
19. QDPR ENSGALG00000030070 6953 1.517 - - - - - - 0.765 0.752 - - quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
20. SOD1 ENSGALG00000015844 35836 1.512 - - - - 0.744 - 0.768 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
21. RARS ENSGALG00000001850 23283 1.51 - - - - - - 0.785 0.725 - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
22. KLF3 ENSGALG00000041717 2787 1.509 - - - - - - 0.774 0.735 - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
23. OPA1 ENSGALG00000007150 5488 1.492 - - - - - - 0.751 0.741 - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
24. ASAP1 ENSGALG00000037618 2887 1.487 - - - - - - 0.747 0.740 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
25. MRPL1 ENSGALG00000010324 5972 1.471 - - - - - - 0.728 0.743 - - mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:HGNC:14275]
26. QTRTD1 QTRTD1 10765 1.467 - - - - - - 0.710 0.757 - -
27. ANKRD50 ENSGALG00000011831 2870 1.466 - - - - - - 0.746 0.720 - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
28. RCN1 RCN1 11758 1.466 - - - - - - 0.721 0.745 - -
29. PDRG1 ENSGALG00000035111 9863 1.465 - - - - - - 0.710 0.755 - - p53 and DNA damage regulated 1 [Source:HGNC Symbol;Acc:HGNC:16119]
30. SNRNP40 ENSGALG00000000615 32298 0.929 - - - - - - 0.929 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
31. MED4 ENSGALG00000016995 3309 0.903 - - - - - - - 0.903 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
32. GLRX3 ENSGALG00000010464 22578 0.9 - - - - - - 0.900 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
33. NDUFAB1 ENSGALG00000006073 40467 0.888 - - - - - - 0.888 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
34. gga-mir-7476 gga-mir-7476 20209 0.885 - - - - - - - 0.885 - -
35. SKAP2 ENSGALG00000030081 13746 0.884 - - - - - - 0.884 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
36. TFB2M ENSGALG00000010651 4374 0.879 - - - - - - 0.879 - - - transcription factor B2, mitochondrial
37. PSMB2 ENSGALG00000026421 51885 0.879 - - - - - - 0.879 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
38. DCPS ENSGALG00000031143 10191 0.876 - - - - - - 0.876 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
39. APIP ENSGALG00000031286 6838 0.875 - - - - - - 0.875 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
40. SCCPDH ENSGALG00000010641 8624 0.872 - - - - - - 0.872 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
41. MRPL50 ENSGALG00000015543 11649 0.872 - - - - - - 0.872 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
42. SPARC ENSGALG00000004184 36410 0.87 - - - - - - 0.870 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
43. UTP11L UTP11L 11927 0.869 - - - - - - 0.869 - - -
44. MPI ENSGALG00000029296 11781 0.869 - - - - - - 0.869 - - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
45. AN1ZNF5L ENSGALG00000014589 21148 0.869 - - - - - - 0.869 - - - AN1-type zinc finger protein 5-like, transcript variant X2
46. ENSGALG00000017396 ENSGALG00000017396 9028 0.869 - - - - - - 0.869 - - -
47. ZFR ENSGALG00000003235 8466 0.868 - - - - - - - 0.868 - - zinc finger RNA binding protein, transcript variant X3
48. YWHAZ ENSGALG00000031387 84985 0.868 - - - - - - 0.868 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
49. RFC5 ENSGALG00000026517 26113 0.865 - - - - - - 0.865 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
50. MCTS1 ENSGALG00000008517 27514 0.864 - - - - - - 0.864 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
51. GOT1 ENSGALG00000007484 21664 0.862 - - - - - - 0.862 - - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
52. SMC4 ENSGALG00000009553 15715 0.862 - - - - - - 0.862 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
53. TXNDC17 ENSGALG00000027950 45004 0.862 - - - - - - 0.862 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
54. ID1 ENSGALG00000034661 44524 0.861 - - - - - - 0.861 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
55. EIF4A2 ENSGALG00000008684 58507 0.859 - - - - - - 0.859 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
56. EHD3 ENSGALG00000009086 14407 0.858 - - - - - - 0.858 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
57. TMEM184C ENSGALG00000010019 7856 0.857 - - - - - - 0.857 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
58. SSR3 ENSGALG00000028683 24334 0.857 - - - - - - 0.857 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
59. MYST2 MYST2 8078 0.856 - - - - - - - 0.856 - -
60. ADSL ENSGALG00000012034 10280 0.856 - - - - - - 0.856 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
61. ILF2 ENSGALG00000011570 23050 0.856 - - - - - - 0.856 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
62. NOC4L ENSGALG00000002272 9644 0.854 - - - - - - 0.854 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
63. OCIAD1 ENSGALG00000014081 12065 0.853 - - - - - - 0.853 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
64. DKC1 ENSGALG00000005054 30350 0.851 - - - - - - 0.851 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
65. CSE1L ENSGALG00000004707 20653 0.851 - - - - - - 0.851 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
66. SH3BGRL3 ENSGALG00000038536 18187 0.85 - - - - - - 0.850 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
67. ZNF593 ENSGALG00000000542 79105 0.849 - - - - - - 0.849 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
68. BNIP3L ENSGALG00000043405 10316 0.848 - - - - - - 0.848 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
69. RBP5 ENSGALG00000014662 31268 0.848 - - - - - - 0.848 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
70. BRP44 BRP44 17093 0.847 - - - - - - 0.847 - - -
71. C11H16ORF80 C11H16ORF80 18673 0.846 - - - - - - 0.846 - - -
72. HSPA4 ENSGALG00000040882 20966 0.846 - - - - - - 0.846 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
73. RUVBL1 ENSGALG00000005931 9379 0.845 - - - - - - 0.845 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
74. RNPS1 ENSGALG00000009288 13588 0.845 - - - - - - 0.845 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
75. MAPKAPK2 ENSGALG00000000883 6174 0.844 - - - - - - - 0.844 - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
76. PSMB7 ENSGALG00000001103 42683 0.844 - - - - - - 0.844 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
77. MCM3 ENSGALG00000016676 16934 0.844 - - - - - - - 0.844 - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
78. WSB2 ENSGALG00000008151 13246 0.844 - - - - - - 0.844 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
79. URI1 ENSGALG00000004506 6024 0.843 - - - - - - 0.843 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
80. DDX19B ENSGALG00000039967 49600 0.842 - - - - - - 0.842 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
81. RBBP4 ENSGALG00000003522 72455 0.842 - - - - - - 0.842 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
82. GUK1 ENSGALG00000005336 5134 0.842 - - - - - - 0.842 - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
83. CZH9ORF80 CZH9ORF80 12760 0.842 - - - - - - 0.842 - - -
84. CASP3 ENSGALG00000010638 11572 0.841 - - - - - - 0.841 - - - caspase 3 [Source:NCBI gene;Acc:395476]
85. PSMD7 ENSGALG00000000707 26350 0.841 - - - - - - - 0.841 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
86. RPF2 ENSGALG00000037087 12788 0.841 - - - - - - 0.841 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
87. EVL ENSGALG00000011209 5440 0.841 - - - - - - 0.841 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
88. RABIF ENSGALG00000000436 6449 0.839 - - - - - - 0.839 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
89. CDK2AP1 ENSGALG00000034919 5469 0.838 - - - - - - 0.838 - - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
90. PRELID1 ENSGALG00000002990 55592 0.838 - - - - - - 0.838 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
91. RRAS2 ENSGALG00000005998 6467 0.838 - - - - - - - 0.838 - - RAS related 2 [Source:NCBI gene;Acc:423062]
92. C17H9ORF16 C17H9ORF16 7908 0.837 - - - - - - 0.837 - - -
93. NCDN ENSGALG00000002408 6180 0.837 - - - - - - 0.837 - - - neurochondrin [Source:NCBI gene;Acc:419633]
94. NDUFV2 ENSGALG00000036625 29234 0.837 - - - - - - 0.837 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
95. DNAJA4 ENSGALG00000036850 6847 0.836 - - - - - - 0.836 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
96. TRAPPC2 ENSGALG00000016578 8749 0.835 - - - - - - 0.835 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
97. KXD1 ENSGALG00000036736 3771 0.835 - - - - - - 0.835 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
98. LLPH ENSGALG00000019358 20976 0.835 - - - - - - 0.835 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
99. RPS3A ENSGALG00000010077 292185 0.834 - - - - - - 0.834 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
100. HMGB2 ENSGALG00000010745 89235 0.834 - - - - - - 0.834 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]

There are 814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA