Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SF1

Gene Name Gene ID Reads Annotation
SF1 ENSG00000168066 32785 splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]



Genes with expression patterns similar to SF1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SF1 ENSG00000168066 32785 2 1.000 1.000 splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]
2. SMARCA4 ENSG00000127616 21398 0.874 - 0.874 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
3. KHSRP ENSG00000088247 13538 0.842 - 0.842 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
4. MARCKSL1 ENSG00000175130 73054 0.821 - 0.821 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
5. USP22 ENSG00000124422 49599 0.819 - 0.819 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
6. HSP90AB1 ENSG00000096384 183977 0.818 - 0.818 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
7. TRIM28 ENSG00000130726 33518 0.814 - 0.814 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
8. DNMT1 ENSG00000130816 23001 0.803 - 0.803 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
9. SAFB ENSG00000160633 7035 0.795 - 0.795 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
10. TACC3 ENSG00000013810 8753 0.793 - 0.793 transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]
11. TCF3 ENSG00000071564 8880 0.789 - 0.789 transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11633]
12. CBX2 ENSG00000173894 9548 0.784 - 0.784 chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
13. UBE2C ENSG00000175063 19631 0.783 - 0.783 ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
14. DCTN1 ENSG00000204843 19815 0.782 - 0.782 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
15. HNRNPUL1 ENSG00000105323 23988 0.779 - 0.779 heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]
16. EIF2AK1 ENSG00000086232 14202 0.779 - 0.779 eukaryotic translation initiation factor 2 alpha kinase 1 [Source:HGNC Symbol;Acc:HGNC:24921]
17. UBA1 ENSG00000130985 20298 0.777 - 0.777 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
18. MKI67 ENSG00000148773 12368 0.776 - 0.776 marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]
19. CKAP5 ENSG00000175216 7463 0.775 - 0.775 cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]
20. STRN4 ENSG00000090372 7212 0.773 - 0.773 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
21. OTUB1 ENSG00000167770 22747 0.773 - 0.773 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
22. CPSF7 ENSG00000149532 16261 0.772 - 0.772 cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]
23. NUP62 ENSG00000213024 9838 0.771 - 0.771 nucleoporin 62 [Source:HGNC Symbol;Acc:HGNC:8066]
24. HCFC1 ENSG00000172534 21012 0.769 - 0.769 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
25. HIC2 ENSG00000169635 8575 0.766 - 0.766 HIC ZBTB transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:18595]
26. EIF4B ENSG00000063046 49494 0.765 - 0.765 eukaryotic translation initiation factor 4B [Source:HGNC Symbol;Acc:HGNC:3285]
27. CTXN1 ENSG00000178531 6094 0.763 - 0.763 cortexin 1 [Source:HGNC Symbol;Acc:HGNC:31108]
28. TBC1D16 ENSG00000167291 4839 0.762 - 0.762 TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
29. TTI1 ENSG00000101407 4394 0.762 - 0.762 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
30. SSBP3 ENSG00000157216 27480 0.761 - 0.761 single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:15674]
31. SKI ENSG00000157933 7837 0.761 - 0.761 SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
32. GIGYF1 ENSG00000146830 2356 0.758 - 0.758 GRB10 interacting GYF protein 1 [Source:HGNC Symbol;Acc:HGNC:9126]
33. CTPS1 ENSG00000171793 3506 0.755 - 0.755 CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
34. PRKDC ENSG00000253729 21627 0.754 - 0.754 protein kinase, DNA-activated, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9413]
35. FAM213B 13531 0.754 - 0.754 family with sequence similarity 213 member B, transcript variant X4
36. CS ENSG00000062485 8243 0.753 - 0.753 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
37. DBN1 ENSG00000113758 12842 0.752 - 0.752 drebrin 1 [Source:HGNC Symbol;Acc:HGNC:2695]
38. GNAI2 ENSG00000114353 8504 0.752 - 0.752 G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
39. ELAVL1 ENSG00000066044 20955 0.75 - 0.750 ELAV like RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3312]
40. EFS ENSG00000100842 2924 0.749 - 0.749 embryonal Fyn-associated substrate [Source:HGNC Symbol;Acc:HGNC:16898]
41. CSK ENSG00000103653 5441 0.749 - 0.749 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
42. TUBA1C ENSG00000167553 11023 0.748 - 0.748 tubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]
43. NOP9 ENSG00000196943, ENSG00000285326 4741 0.748 - 0.748 NOP9 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:19826]
44. MSI1 ENSG00000135097 6935 0.747 - 0.747 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
45. SMARCD1 ENSG00000066117 5983 0.746 - 0.746 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:HGNC:11106]
46. ARHGDIA ENSG00000141522 3661 0.746 - 0.746 Rho GDP dissociation inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:678]
47. SMARCC2 ENSG00000139613 11165 0.743 - 0.743 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]
48. HNRNPAB ENSG00000197451 34938 0.743 - 0.743 heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]
49. AAAS ENSG00000094914 7598 0.742 - 0.742 aladin WD repeat nucleoporin [Source:HGNC Symbol;Acc:HGNC:13666]
50. SNRNP70 ENSG00000104852 14118 0.74 - 0.740 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
51. WHSC1 9250 0.737 - 0.737 Wolf-Hirschhorn syndrome candidate 1, transcript variant X7
52. EEF2 ENSG00000167658 47680 0.735 - 0.735 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
53. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.735 - 0.735 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
54. FTO ENSG00000140718 19943 0.735 - 0.735 FTO, alpha-ketoglutarate dependent dioxygenase [Source:HGNC Symbol;Acc:HGNC:24678]
55. NASP ENSG00000132780 16937 0.733 - 0.733 nuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]
56. USP11 ENSG00000102226 8177 0.733 - 0.733 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
57. JRK ENSG00000234616 3021 0.731 - 0.731 Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]
58. HDGF ENSG00000143321 18626 0.731 - 0.731 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
59. MAP1A ENSG00000166963 2125 0.729 - 0.729 microtubule associated protein 1A [Source:HGNC Symbol;Acc:HGNC:6835]
60. REPIN1 ENSG00000214022 4516 0.729 - 0.729 replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]
61. FOXRED2 ENSG00000100350 5176 0.729 - 0.729 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
62. PATL1 ENSG00000166889 11962 0.728 - 0.728 PAT1 homolog 1, processing body mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:26721]
63. TAF6 ENSG00000106290 8475 0.727 - 0.727 TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
64. NRM ENSG00000137404, ENSG00000206484, ENSG00000228854, ENSG00000228867, ENSG00000234809, ENSG00000235773, ENSG00000236843 7767 0.726 - 0.726 nurim [Source:HGNC Symbol;Acc:HGNC:8003]
65. BRD4 ENSG00000141867 3980 0.725 - 0.725 bromodomain containing 4 [Source:HGNC Symbol;Acc:HGNC:13575]
66. RBM8A ENSG00000265241 18888 0.723 - 0.723 RNA binding motif protein 8A [Source:HGNC Symbol;Acc:HGNC:9905]
67. CTDNEP1 ENSG00000175826 15483 0.723 - 0.723 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
68. TSC2 ENSG00000103197 7240 0.722 - 0.722 TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
69. PGD ENSG00000142657 19400 0.722 - 0.722 phosphogluconate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8891]
70. NLGN2 ENSG00000169992, ENSG00000283859 3569 0.721 - 0.721 neuroligin 2 [Source:HGNC Symbol;Acc:HGNC:14290]
71. BAHCC1 ENSG00000266074 3120 0.721 - 0.721 BAH domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29279]
72. MED24 ENSG00000008838 7251 0.72 - 0.720 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
73. TNKS1BP1 ENSG00000149115 3681 0.72 - 0.720 tankyrase 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19081]
74. MOB3A ENSG00000172081 2616 0.719 - 0.719 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
75. ILF3 ENSG00000129351 19056 0.718 - 0.718 interleukin enhancer binding factor 3 [Source:HGNC Symbol;Acc:HGNC:6038]
76. JUND ENSG00000130522 6886 0.718 - 0.718 JunD proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6206]
77. RNPS1 ENSG00000205937 13270 0.718 - 0.718 RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
78. CDIP1 ENSG00000089486, ENSG00000274336 2346 0.718 - 0.718 cell death inducing p53 target 1 [Source:HGNC Symbol;Acc:HGNC:13234]
79. DYNC1H1 ENSG00000197102 14239 0.717 - 0.717 dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
80. FSCN1 ENSG00000075618 34169 0.716 - 0.716 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
81. PKM ENSG00000067225 58854 0.713 - 0.713 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
82. MLF2 ENSG00000089693 18042 0.713 - 0.713 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
83. DVL3 ENSG00000161202 5984 0.713 - 0.713 dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
84. STK4 ENSG00000101109 5407 0.712 - 0.712 serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:11408]
85. PLXNA1 ENSG00000114554 3045 0.712 - 0.712 plexin A1 [Source:HGNC Symbol;Acc:HGNC:9099]
86. TRAP1 ENSG00000126602 7214 0.712 - 0.712 TNF receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16264]
87. EIF3L ENSG00000100129 47251 0.711 - 0.711 eukaryotic translation initiation factor 3 subunit L [Source:HGNC Symbol;Acc:HGNC:18138]
88. UCK2 ENSG00000143179 4167 0.711 - 0.711 uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:HGNC:12562]
89. SNRPA ENSG00000077312 4577 0.71 - 0.710 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
90. ATG13 ENSG00000175224 3018 0.71 - 0.710 autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
91. BAZ1B ENSG00000009954 13745 0.709 - 0.709 bromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]
92. SRF ENSG00000112658 7811 0.709 - 0.709 serum response factor [Source:HGNC Symbol;Acc:HGNC:11291]
93. RUVBL1 ENSG00000175792, ENSG00000284901 3789 0.708 - 0.708 RuvB like AAA ATPase 1 [Source:HGNC Symbol;Acc:HGNC:10474]
94. CCND1 ENSG00000110092 8014 0.708 - 0.708 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
95. WIZ ENSG00000011451 2935 0.707 - 0.707 widely interspaced zinc finger motifs [Source:HGNC Symbol;Acc:HGNC:30917]
96. IP6K1 ENSG00000176095 2194 0.707 - 0.707 inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
97. ARID1A ENSG00000117713 13847 0.706 - 0.706 AT-rich interaction domain 1A [Source:HGNC Symbol;Acc:HGNC:11110]
98. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.706 - 0.706 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
99. ASF1B ENSG00000105011 6283 0.706 - 0.706 anti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]
100. PIK3R2 ENSG00000105647 8036 0.705 - 0.705 phosphoinositide-3-kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:8980]

There are 11 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA