Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SERBP1

Gene Name Gene ID Reads Annotation
SERBP1 ENSGALG00000011229 30489 SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]











Genes with expression patterns similar to SERBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SERBP1 ENSGALG00000011229 30489 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
2. CCAR1 ENSGALG00000004108 13219 2.453 0.723 - - - - - 0.991 0.739 - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
3. FGD5 ENSGALG00000008546 4031 1.816 - - - - - - 0.981 0.835 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
4. POLR2C ENSGALG00000001168 10703 1.815 - - - - - - 0.988 0.827 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
5. TAF12 ENSGALG00000000991 8709 1.79 - - - - - - 0.946 0.844 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
6. MOB4 ENSGALG00000008128 10322 1.775 - - - - - - 0.986 0.789 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
7. DNAJC10 ENSGALG00000008862 3114 1.705 0.716 - - - - - 0.989 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
8. ENSGALG00000000360 ENSGALG00000000360 15320 1.695 - - - - - - 0.964 0.731 - -
9. ATRX ENSGALG00000007843 34172 1.534 0.752 - 0.782 - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
10. MYBL2 ENSGALG00000003503 15875 0.996 - - - - - - 0.996 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
11. COMMD8 ENSGALG00000026279 13509 0.995 - - - - - - 0.995 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
12. GALNTL4 GALNTL4 3548 0.995 - - - - - - 0.995 - - -
13. C6H10ORF32 C6H10ORF32 7694 0.993 - - - - - - 0.993 - - -
14. CCDC90B ENSGALG00000037072 5088 0.993 - - - - - - 0.993 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
15. GLT8D1 ENSGALG00000001642 4232 0.993 - - - - - - 0.993 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
16. gga-mir-1723 ENSGALG00000025386 6662 0.993 - - - - - - 0.993 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
17. DIS3 ENSGALG00000016930 3696 0.992 - - - - - - 0.992 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
18. LOC424109 ENSGALG00000008738 3932 0.992 - - - - - - 0.992 - - - alpha-aspartyl dipeptidase
19. TTF1 4214 0.992 - - - - - - 0.992 - - - transcription termination factor 1
20. USO1 ENSGALG00000010878 9506 0.992 - - - - - - 0.992 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
21. ENSGALG00000006730 ENSGALG00000006730 3695 0.991 - - - - - - 0.991 - - -
22. ABRACL ENSGALG00000013826 19445 0.991 - - - - - - 0.991 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
23. GCAT ENSGALG00000012312 7906 0.991 - - - - - - 0.991 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
24. PRKG1 ENSGALG00000003805 4654 0.991 - - - - - - 0.991 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
25. APITD1 APITD1 11830 0.991 - - - - - - 0.991 - - -
26. CTNNBL1 ENSGALG00000006817 6765 0.991 - - - - - - 0.991 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
27. FHL3 ENSGALG00000035187 9753 0.991 - - - - - - 0.991 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
28. MMADHC ENSGALG00000012473 9026 0.991 - - - - - - 0.991 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
29. ZNF276 ENSGALG00000000513 2410 0.99 - - - - - - 0.990 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
30. ATPAF2 ENSGALG00000004926 3393 0.99 - - - - - - 0.990 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
31. EPHA3 ENSGALG00000015403 9811 0.99 - - - - - - 0.990 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
32. PPP3CB ENSGALG00000005243 8794 0.99 - - - - - - 0.990 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
33. CDC5L ENSGALG00000016704 22893 0.99 - - - - - - 0.990 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
34. MRPS15 ENSGALG00000044433 15356 0.989 - - - - - - 0.989 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
35. SNAPIN ENSGALG00000026796 11155 0.989 - - - - - - 0.989 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
36. RNF13 ENSGALG00000010411 8749 0.989 - - - - - - 0.989 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
37. RPUSD4 ENSGALG00000024326 3788 0.989 - - - - - - 0.989 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
38. LOC425795 ENSGALG00000027696 2357 0.989 - - - - - - 0.989 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
39. CRAC1A CRAC1A 5265 0.989 - - - - - - 0.989 - - -
40. CSDE1 ENSGALG00000002139 1683 0.988 - - - - - - 0.988 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
41. CHL1 ENSGALG00000037856 1565 0.988 - - - - - - 0.988 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
42. LHFPL2 ENSGALG00000004437 500 0.988 - - - - - - 0.988 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
43. LUZP2 ENSGALG00000030151 585 0.988 - - - - - - 0.988 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
44. MAPT ENSGALG00000000625 659 0.988 - - - - - - 0.988 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
45. CNBP 42704 0.988 - - - - - - 0.988 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
46. LYVE1 ENSGALG00000005643 1230 0.988 - - - - - - 0.988 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
47. SAV1 ENSGALG00000012341 3313 0.987 - - - - - - 0.987 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
48. PSMD13 ENSGALG00000043684 14720 0.985 - - - - - - 0.985 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
49. SPINT1 ENSGALG00000008469 5735 0.984 - - - - - - 0.984 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
50. NOB1 ENSGALG00000000693 15442 0.984 - - - - - - 0.984 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
51. GDPD4 ENSGALG00000000690 824 0.983 - - - - - - 0.983 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. ANLN 10479 0.983 - - - - - - 0.983 - - - anillin actin binding protein, transcript variant X2
53. SH3RF3 ENSGALG00000016810 2169 0.983 - - - - - - 0.983 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
54. GSDMA ENSGALG00000013495 1650 0.983 - - - - - - 0.983 - - - gasdermin A [Source:NCBI gene;Acc:426132]
55. RPF1 ENSGALG00000008796 9809 0.983 - - - - - - 0.983 - - - ribosome production factor 1 homolog
56. POLB ENSGALG00000040828 7462 0.98 - - - - - - 0.980 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
57. ENSGALG00000013825 ENSGALG00000013825 16473 0.978 - - - - - - 0.978 - - -
58. MRPS36 ENSGALG00000014789 7584 0.978 - - - - - - 0.978 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
59. ACTR6 ENSGALG00000040976 31271 0.977 - - - - - - 0.977 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
60. MRPS34 ENSGALG00000001792 14262 0.977 - - - - - - 0.977 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
61. KMT2C 6306 0.976 - - - - - - - 0.976 - - lysine methyltransferase 2C, transcript variant X14
62. TP53INP1 ENSGALG00000041353 6890 0.975 - - - - - - 0.975 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
63. ENSGALG00000007574 ENSGALG00000007574 7695 0.973 - - - - - - - 0.973 - -
64. PELI1 ENSGALG00000008837 11561 0.972 - - - - - - 0.972 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
65. PXDN ENSGALG00000016377 4255 0.969 - - - - - - - 0.969 - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
66. MRPS26 ENSGALG00000014118 27422 0.968 - - - - - - 0.968 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
67. CCT5 ENSGALG00000013041 56190 0.967 - - - - - - 0.967 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
68. gga-mir-1610 ENSGALG00000025580 3985 0.965 - - - - - - - 0.965 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
69. MTO1 ENSGALG00000015923 4418 0.964 - - - - - - - 0.964 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
70. ZDHHC6 ENSGALG00000008870 16575 0.962 - - - - - - 0.962 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
71. TRIB2 ENSGALG00000016457 17641 0.961 - - - - - - 0.961 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
72. MED1 ENSGALG00000001708 9556 0.959 - - - - - - 0.959 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
73. TBL1X ENSGALG00000040006 28597 0.959 - - - - - - 0.959 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
74. EZH2 ENSGALG00000043399 15881 0.959 - - - - - - 0.959 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
75. OCC-1 OCC-1 1887 0.956 - - - - - - - 0.956 - -
76. TPI1 ENSGALG00000014526 43273 0.954 - - - - - - 0.954 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
77. BUB3 ENSGALG00000009681 36055 0.953 - - - - - - 0.953 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
78. EXOSC7 ENSGALG00000030084 8654 0.952 - - - - - - 0.952 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
79. STAG2 ENSGALG00000008482 13629 0.946 - - - - - - 0.946 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
80. HDLBP ENSGALG00000005823 24636 0.945 - - - - - - 0.945 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
81. LOC407092 ENSGALG00000013809 10706 0.945 - - - - - - 0.945 - - - AD012Z, transcript variant X5
82. DDX18 ENSGALG00000012147 12463 0.944 - - - - - - 0.944 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
83. PRDX1 ENSGALG00000010243 151918 0.943 - - - - - - 0.943 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
84. SNX17 ENSGALG00000032468 13519 0.943 - - - - - - 0.943 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
85. VDAC3 ENSGALG00000041463 21595 0.937 - - - - - - 0.937 - - - voltage dependent anion channel 3, transcript variant X9
86. TRA2A ENSGALG00000010973 37101 0.934 - - - - - - 0.934 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
87. PPFIBP1 ENSGALG00000014106 9864 0.93 - - - - - - - 0.930 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
88. RND3 ENSGALG00000026313 9271 0.92 - - - - - - - 0.920 - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
89. WLS ENSGALG00000011238 20969 0.914 - - - - - - 0.914 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
90. SNRPB2 28675 0.907 - - - - - - 0.907 - - - small nuclear ribonucleoprotein polypeptide B2
91. ARGLU1 ENSGALG00000016855 25633 0.901 - - - - - - 0.901 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
92. CHPKCI CHPKCI 36217 0.892 - - - - - - 0.892 - - -
93. UBE2N ENSGALG00000030515 32059 0.871 - - - - - - 0.871 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
94. ST13 ENSGALG00000012007 25670 0.866 - - - - - - 0.866 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
95. RPS25 ENSGALG00000007699 156127 0.86 - - - - - - 0.860 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
96. FBN3 ENSGALG00000037625 23313 0.854 - - - - - - - 0.854 - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
97. CTSA ENSGALG00000006876 5380 0.854 - - - - - - - 0.854 - - cathepsin A [Source:NCBI gene;Acc:428163]
98. DLGAP4 ENSGALG00000001046 6872 0.852 - - - - - - - 0.852 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
99. METTL6 ENSGALG00000040665 4467 0.85 - - - - - - - 0.850 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
100. AARSD1 ENSGALG00000002880 3068 0.849 - - - - - - - 0.849 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA