Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SERAC1

Gene Name Gene ID Reads Annotation
SERAC1 ENSGALG00000013732 24 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]











Genes with expression patterns similar to SERAC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SERAC1 ENSGALG00000013732 24 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
2. TNFAIP3 ENSGALG00000013861 11 1.917 - - 0.967 - - - - - - 0.950 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
3. U4atac U4atac 23 1.706 - - 0.961 - - 0.745 - - - -
4. INADL INADL 51 1.686 - - 0.754 - - - - - - 0.932
5. LRRC47 7 1.684 - - 0.939 - - 0.745 - - - - leucine rich repeat containing 47
6. SLC30A9 ENSGALG00000031415 36 1.633 - - - - 0.740 - - - - 0.893 solute carrier family 30 member 9
7. LRRIQ1 147 1.526 - - - - - 0.743 - - - 0.783 leucine rich repeats and IQ motif containing 1, transcript variant X2
8. TACR3 ENSGALG00000010596 31 1.468 - - - - 0.763 0.705 - - - - Gallus gallus tachykinin receptor 3 (TACR3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318454]
9. TNR ENSGALG00000004526 6 1 - - - - 1.000 - - - - - tenascin R [Source:NCBI gene;Acc:396213]
10. HOMER1 ENSGALG00000014813 19 1 - - - - 1.000 - - - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
11. DSG2 ENSGALG00000015142 67 1 - - - - 1.000 - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
12. ZC3H12A ENSGALG00000002021 2 1 - - - - 1.000 - - - - - zinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]
13. ENSGALG00000012217 ENSGALG00000012217 8 1 - - - - 1.000 - - - - -
14. LRRC34 ENSGALG00000009402 3 1 - - - - 1.000 - - - - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
15. PDZD7 ENSGALG00000020726 72 1 - - - - 1.000 - - - - - PDZ domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26257]
16. GCG ENSGALG00000011104 38 1 - - - - 1.000 - - - - - glucagon [Source:NCBI gene;Acc:396196]
17. GRAMD2 GRAMD2 3 1 - - - - 1.000 - - - - -
18. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - 1.000 - - - - -
19. TMEM11 ENSGALG00000004749 206 1 - - - - 1.000 - - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
20. C3orf18 ENSGALG00000002240 1 1 - - - - 1.000 - - - - - chromosome 3 open reading frame 18 [Source:HGNC Symbol;Acc:HGNC:24837]
21. CLRN1 ENSGALG00000010384 7 0.969 - - - - - 0.969 - - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
22. GAN ENSGALG00000013437 11 0.967 - - 0.967 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
23. GPD1L2 ENSGALG00000012061 31 0.967 - - 0.967 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
24. CNGA2 ENSGALG00000007282 2 0.967 - - 0.967 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
25. LRP3 ENSGALG00000004853 13 0.967 - - 0.967 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
26. ENSGALG00000026347 ENSGALG00000026347 2 0.967 - - 0.967 - - - - - - -
27. TLL2 ENSGALG00000005519 10 0.967 - - 0.967 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
28. FHL2 ENSGALG00000016797 11 0.967 - - 0.967 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
29. ZMAT4 ENSGALG00000003470 2 0.967 - - 0.967 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
30. SNX8 ENSGALG00000004255 4 0.967 - - 0.967 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
31. POMGNT2 ENSGALG00000011518 36 0.967 - - 0.967 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
32. CLRN2 ENSGALG00000027453 3 0.967 - - 0.967 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
33. LOXHD1 ENSGALG00000037829 3 0.967 - - 0.967 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
34. ENSGALG00000009041 ENSGALG00000009041 27 0.967 - - 0.967 - - - - - - -
35. LRRC49 ENSGALG00000004059 29 0.962 - - 0.962 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
36. ADAM17 ENSGALG00000016427 49 0.958 - - 0.958 - - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
37. BMP2K ENSGALG00000010885 37 0.953 - - - - - - - - - 0.953 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
38. SYCP1 ENSGALG00000002511 13 0.951 - - 0.951 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
39. COL15A1 ENSGALG00000034119 9 0.951 - - - - 0.951 - - - - - collagen type XV alpha 1 chain, transcript variant X6
40. SLC17A6 ENSGALG00000039254 16 0.95 - - 0.950 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
41. gga-mir-6544 ENSGALG00000027916 19 0.95 - - - - - - - - - 0.950 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
42. OSBPL2 ENSGALG00000005195 94 0.949 - - - - - - - - - 0.949 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
43. HOXB13 ENSGALG00000033154 71 0.949 - - 0.949 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
44. C3orf58 ENSGALG00000002347 27 0.949 - - - - - - - - - 0.949 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
45. NMBR ENSGALG00000013813 15 0.948 - - - - - - - - - 0.948 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
46. PPHLN1 ENSGALG00000009547 30 0.947 - - 0.947 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
47. BOK ENSGALG00000005772 117 0.947 - - - - - - - - - 0.947 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
48. TRAK2 ENSGALG00000008370 46 0.946 - - - - - - - - - 0.946 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
49. TNN ENSGALG00000004538 21 0.942 - - - - - - - - - 0.942 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
50. AKAP11 ENSGALG00000022739 82 0.941 - - - - - - - - - 0.941 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
51. TRMT61A ENSGALG00000011522 14 0.94 - - - - - - - - - 0.940 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
52. CLIC3 ENSGALG00000038789 233 0.94 - - - - - - - - - 0.940 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
53. TBX5 ENSGALG00000008253 820 0.94 - - - - - - - - - 0.940 T-box 5 [Source:NCBI gene;Acc:373988]
54. ZMYND10 ENSGALG00000035883 58 0.94 - - - - - - - - - 0.940 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
55. PHF11 ENSGALG00000019094 770 0.939 - - - - - - - - - 0.939 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
56. SLC7A2 ENSGALG00000013627 58 0.937 - - - - - - - - - 0.937 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
57. CALR3 ENSGALG00000003914 8 0.936 - - 0.936 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
58. TMEM200B ENSGALG00000024318 117 0.935 - - - - - - - - - 0.935 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
59. PXK ENSGALG00000007052 121 0.935 - - - - - - - - - 0.935 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
60. TNFAIP2 ENSGALG00000011446 32 0.933 - - - - - - - - - 0.933 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
61. KAT6B ENSGALG00000005035 301 0.932 - - - - - - - - - 0.932 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
62. STARD3 ENSGALG00000014607 115 0.932 - - - - 0.932 - - - - - StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]
63. PKD2 ENSGALG00000010921 55 0.932 - - - - - - - - - 0.932 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
64. SLC5A11 ENSGALG00000005933 28 0.931 - - 0.931 - - - - - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
65. SENP7 ENSGALG00000044642 48 0.93 - - - - - - - - - 0.930 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
66. ING5 ENSGALG00000006317 149 0.929 - - - - - - - - - 0.929 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
67. TRPM1 ENSGALG00000003849 5 0.928 - - 0.928 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
68. B4GALNT3 ENSGALG00000012988 12 0.928 - - 0.928 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
69. SLC35A3 12 0.928 - - 0.928 - - - - - - - solute carrier family 35 member A3, transcript variant X7
70. ENSGALG00000001323 ENSGALG00000001323 3 0.928 - - 0.928 - - - - - - -
71. ENC1 ENSGALG00000014930 10 0.926 - - 0.926 - - - - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
72. SLC20A1 ENSGALG00000013740 40 0.925 - - - - - - - - - 0.925 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
73. PLXNB1 23 0.925 - - 0.925 - - - - - - - plexin B1, transcript variant X2
74. TNPO1 ENSGALG00000015014 57 0.924 - - 0.924 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
75. FAM154B FAM154B 175 0.924 - - - - - - - - - 0.924
76. SMEK1 SMEK1 95 0.923 - - - - - - - - - 0.923
77. ZEB2 ENSGALG00000040465 315 0.922 - - - - - - - - - 0.922 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
78. SNX18 ENSGALG00000014914 7 0.921 - - 0.921 - - - - - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
79. GSS ENSGALG00000003281 57 0.921 - - - - - - - - - 0.921 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
80. PDE3A ENSGALG00000013143 28 0.92 - - - - - - - - - 0.920 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
81. KCNB1 ENSGALG00000004758 620 0.92 - - - - - - - - - 0.920 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
82. ROGDI ENSGALG00000001841 313 0.918 - - - - - - - - - 0.918 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
83. GCM2 ENSGALG00000012768 6 0.917 - - 0.917 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
84. LMBR1 ENSGALG00000030379 29 0.917 - - - - - - - - - 0.917 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
85. TRAF-5 TRAF-5 102 0.917 - - - - - - - - - 0.917
86. SBDS ENSGALG00000027989 112 0.915 - - - - - - - - - 0.915 SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
87. TM6SF1 ENSGALG00000006027 20 0.914 - - - - - - - - - 0.914 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
88. ERRFI1 ENSGALG00000000535 83 0.912 - - - - - - - - - 0.912 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
89. ZNF385B ENSGALG00000009012 290 0.911 - - - - - - - - - 0.911 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
90. BLOC1S2 ENSGALG00000005794 544 0.909 - - - - - - - - - 0.909 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
91. HOXB1 ENSGALG00000013454 9 0.906 - - 0.906 - - - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
92. gga-mir-20b gga-mir-20b 7 0.906 - - 0.906 - - - - - - -
93. DNAAF2 ENSGALG00000012232 34 0.903 - - - - 0.903 - - - - - dynein axonemal assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:20188]
94. MYCN ENSGALG00000016462 1930 0.901 - - - - - - - - - 0.901 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
95. KIF24 ENSGALG00000005806 124 0.901 - - - - - - - - - 0.901 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
96. DCUN1D3 ENSGALG00000002267 6 0.9 - - 0.900 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
97. TGFBRAP1 ENSGALG00000016795 81 0.9 - - - - - - - - - 0.900 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
98. SRR ENSGALG00000003155 93 0.899 - - - - - - - - - 0.899 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
99. HS1BP3 ENSGALG00000016486 380 0.899 - - - - - - - - - 0.899 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
100. CREB5 ENSGALG00000038265 92 0.898 - - - - - - - - - 0.898 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]

There are 299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA