Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEPN1

Gene Name Gene ID Reads Annotation
SEPN1 SEPN1 58











Genes with expression patterns similar to SEPN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEPN1 SEPN1 58 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. CD200L ENSGALG00000015395 14 1.803 - - - - - 0.968 - - - 0.835 CD200 molecule-like [Source:NCBI gene;Acc:418424]
3. LOXL4 ENSGALG00000013090 9 1.729 - - - - - 0.968 - - - 0.761 lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
4. SLC45A3 ENSGALG00000000703 85 1.54 - - - - 0.792 0.748 - - - - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
5. PDE8A ENSGALG00000005992 10 0.986 - - - - - 0.986 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
6. CLDN4 2 0.968 - - - - - 0.968 - - - - claudin 4
7. SLC26A2 ENSGALG00000001239 3 0.968 - - - - - 0.968 - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
8. CLCNKB ENSGALG00000003713 27 0.968 - - - - - 0.968 - - - - chloride voltage-gated channel Kb, transcript variant X3
9. TREM-B1 ENSGALG00000003361 8 0.968 - - - - - 0.968 - - - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
10. EPAS1 ENSGALG00000010005 14 0.968 - - - - - 0.968 - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
11. VSTM2L ENSGALG00000006792 11 0.968 - - - - - 0.968 - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
12. SGPP2 ENSGALG00000005245 20 0.968 - - - - - 0.968 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
13. FRY ENSGALG00000017075 8 0.968 - - - - - 0.968 - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
14. OTC ENSGALG00000016254 6 0.968 - - - - - 0.968 - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
15. PKP3 ENSGALG00000004260 3 0.968 - - - - - 0.968 - - - - plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]
16. SULT1C SULT1C 118 0.968 - - - - - 0.968 - - - -
17. ENSGALG00000022792 ENSGALG00000022792 2 0.968 - - - - - 0.968 - - - -
18. ESPN ENSGALG00000000645 2 0.968 - - - - - 0.968 - - - - espin [Source:HGNC Symbol;Acc:HGNC:13281]
19. ENSGALG00000004119 ENSGALG00000004119 1 0.968 - - - - - 0.968 - - - -
20. OLAH ENSGALG00000043833 3 0.968 - - - - - 0.968 - - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
21. RRP8 109 0.968 - - - - - 0.968 - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
22. ZNF366 ENSGALG00000015008 189 0.968 - - - - - 0.968 - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
23. IGFBP1 ENSGALG00000043493 68 0.968 - - - - - 0.968 - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
24. C1R ENSGALG00000014659 9 0.968 - - - - - 0.968 - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
25. TBC1D13 ENSGALG00000004645 1 0.968 - - - - - 0.968 - - - - TBC1 domain family member 13 [Source:HGNC Symbol;Acc:HGNC:25571]
26. RBP7 ENSGALG00000002637 11 0.968 - - - - - 0.968 - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
27. SRSF2 ENSGALG00000017357 180 0.968 - - - - - 0.968 - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
28. UGP2 ENSGALG00000008855 20 0.968 - - - - - 0.968 - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
29. SGSM1 ENSGALG00000005379 10 0.968 - - - - - 0.968 - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
30. FAM53B ENSGALG00000009718 1 0.968 - - - - - 0.968 - - - - family with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]
31. ZDHHC18 ENSGALG00000034910 16 0.968 - - - - - 0.968 - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
32. LOC771066 ENSGALG00000026964 1 0.968 - - - - - 0.968 - - - - claw keratin-like, transcript variant X1
33. C4A ENSGALG00000017040 5 0.968 - - - - - 0.968 - - - - complement C4A (Rodgers blood group), transcript variant X2
34. TDRD6 48 0.968 - - - - - 0.968 - - - - tudor domain containing 6
35. SPTSSBL ENSGALG00000026131 70 0.968 - - - - - 0.968 - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
36. ENSGALG00000025727 ENSGALG00000025727 26 0.959 - - - - - 0.959 - - - -
37. BTLA ENSGALG00000015398 34 0.949 - - - - - 0.949 - - - - B and T lymphocyte associated, transcript variant X1
38. BLB1 ENSGALG00000000141 13 0.948 - - - - - 0.948 - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
39. PTPN13 ENSGALG00000011078 62 0.947 - - - - - 0.947 - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
40. ABCA8 ENSGALG00000021399 11 0.943 - - - - - 0.943 - - - - ATP binding cassette subfamily A member 8
41. PCOLCE2 ENSGALG00000002623 8 0.942 - - - - - 0.942 - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
42. CKMT1A ENSGALG00000008352 44 0.937 - - - - - 0.937 - - - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
43. PLCD4 ENSGALG00000026687 24 0.933 - - - - - 0.933 - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
44. MUC6 ENSGALG00000040530 11 0.93 - - - - - 0.930 - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
45. SPATA6 ENSGALG00000010502 16 0.928 - - - - - - - - - 0.928 spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
46. SNORA31 SNORA31 183 0.921 - - - - - 0.921 - - - -
47. SYNE3 ENSGALG00000011076 22 0.92 - - - - - 0.920 - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
48. PCDHA11 58 0.92 - - - - - 0.920 - - - - protocadherin alpha 11
49. KRT20 ENSGALG00000019716 11 0.913 - - - - - 0.913 - - - - keratin 20 [Source:NCBI gene;Acc:420045]
50. ARHGAP20 ENSGALG00000017150 100 0.906 - - - - - 0.906 - - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
51. ZNF827 ENSGALG00000009982 7 0.896 - - - - - 0.896 - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
52. TIE1 ENSGALG00000009957 97 0.892 - - - - - 0.892 - - - - tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]
53. ZNFX1 ENSGALG00000004859 33 0.891 - - - - 0.891 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
54. MYH7B ENSGALG00000030985 199 0.888 - - - - - 0.888 - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
55. AK8 ENSGALG00000040923 10 0.888 - - - - - 0.888 - - - - adenylate kinase 8, transcript variant X1
56. SEC61A1 ENSGALG00000005966 9 0.883 - - - - - - - - - 0.883 Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
57. FANCF ENSGALG00000003660 25 0.88 - - - - - 0.880 - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
58. ALG12 ENSGALG00000008539 20 0.872 - - - - - 0.872 - - - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
59. LITAF ENSGALG00000003217 7 0.871 - - - - - - - - - 0.871 lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
60. ARHGEF17 6 0.871 - - - - - - - - - 0.871 Rho guanine nucleotide exchange factor 17
61. MTMR9LP ENSGALG00000003313 64 0.87 - - - - - 0.870 - - - - myotubularin related protein 9-like, pseudogene, transcript variant X3
62. KLF9 ENSGALG00000027374 38 0.866 - - - - - 0.866 - - - - Kruppel like factor 9 [Source:HGNC Symbol;Acc:HGNC:1123]
63. CAMK4L ENSGALG00000015203 5 0.864 - - - - - 0.864 - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
64. PRKAR2B ENSGALG00000008060 40 0.863 - - - - 0.863 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
65. TRIM14 ENSGALG00000015315 22 0.863 - - - - 0.863 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
66. gga-mir-99a ENSGALG00000018242 192 0.863 - - - - 0.863 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
67. THRB ENSGALG00000011294 7 0.863 - - - - 0.863 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
68. IL22RA1 ENSGALG00000004221 71 0.863 - - - - 0.863 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
69. SLCO1B1 ENSGALG00000019276 7 0.857 - - - - 0.857 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
70. ENSGALG00000027427 ENSGALG00000027427 16 0.847 - - - - 0.847 - - - - -
71. MALSU1 ENSGALG00000010954 51 0.839 - - - - 0.839 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
72. AFAP1L2 ENSGALG00000008999 1305 0.838 - - - - - 0.838 - - - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
73. TNS3 ENSGALG00000039139 63 0.836 - - - - - 0.836 - - - - tensin 3 [Source:NCBI gene;Acc:420792]
74. ST6GALNAC2L ENSGALG00000006900 85 0.835 - - - - - 0.835 - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like, transcript variant X3
75. GDNF ENSGALG00000003716 7 0.834 - - - - - - - - - 0.834 glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
76. CYP4A22 ENSGALG00000020688 741 0.834 - - - - - 0.834 - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
77. DLEC1 ENSGALG00000005826 23 0.832 - - - - - 0.832 - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
78. SRP54 ENSGALG00000023135 372 0.831 - - - - 0.831 - - - - - signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
79. SCUBE1 ENSGALG00000014178 91 0.831 - - - - 0.831 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
80. LAMA5 486 0.829 - - - - - 0.829 - - - - laminin subunit alpha 5, transcript variant X3
81. CEP170B ENSGALG00000011639 71 0.828 - - - - 0.828 - - - - - centrosomal protein 170B, transcript variant X13
82. ENSGALG00000005433 ENSGALG00000005433 55 0.825 - - - - 0.825 - - - - -
83. TRPC2L ENSGALG00000017493 28 0.823 - - - - - 0.823 - - - - Putative short transient receptor potential channel 2-like protein
84. PRKCQ ENSGALG00000034970 19 0.822 - - - - - 0.822 - - - - protein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]
85. RAB37 ENSGALG00000027789 17 0.815 - - - - 0.815 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
86. KRT15 ENSGALG00000019718 64 0.811 - - - - - 0.811 - - - - keratin 15 [Source:NCBI gene;Acc:408040]
87. SLC24A2 ENSGALG00000015080 54 0.809 - - - - 0.809 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
88. LOC770405 ENSGALG00000013105 25 0.808 - - - - 0.808 - - - - - SUN domain-containing protein 3-like, transcript variant X2
89. CNR1 ENSGALG00000037511 38 0.808 - - - - 0.808 - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
90. MBIP ENSGALG00000010096 2476 0.806 - - - - - 0.806 - - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
91. MPLKIP ENSGALG00000031294 65 0.805 - - - - - 0.805 - - - - M-phase specific PLK1 interacting protein [Source:HGNC Symbol;Acc:HGNC:16002]
92. CBX4 ENSGALG00000035911 105 0.805 - - - - - 0.805 - - - - chromobox 4 [Source:NCBI gene;Acc:395354]
93. PDE6G ENSGALG00000004514 231 0.803 - - - - - 0.803 - - - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
94. ENSGALG00000024018 ENSGALG00000024018 37 0.8 - - - - - - 0.800 - - -
95. MAL2 ENSGALG00000040768 75 0.8 - - - - 0.800 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
96. CCP110 ENSGALG00000006925 59 0.797 - - - - - 0.797 - - - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
97. TMPRSS7 ENSGALG00000015389 12 0.796 - - - - - - - - - 0.796 transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
98. WARS ENSGALG00000011228 193 0.796 - - - - 0.796 - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
99. HHLA2 ENSGALG00000022871 19 0.795 - - - - 0.795 - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
100. LDHD ENSGALG00000023828 60 0.793 - - - - 0.793 - - - - - lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]

There are 105 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA