Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA6D

Gene Name Gene ID Reads Annotation
SEMA6D ENSGALG00000030542 3780 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]











Genes with expression patterns similar to SEMA6D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA6D ENSGALG00000030542 3780 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
2. CHTF18 ENSGALG00000040157 2140 1.779 - - - - - - 0.847 0.932 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
3. TMEM33 ENSGALG00000014248 6069 1.762 - - - - - - 0.842 0.920 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
4. OSBPL1A ENSGALG00000015086 2702 1.689 - - - - - - 0.796 0.893 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
5. TAF1B ENSGALG00000016437 2318 1.672 - - - - - - 0.763 0.909 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
6. NAPEPLD ENSGALG00000008285 1295 1.667 - - - - - - 0.741 0.926 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
7. SRP19 ENSGALG00000000218 14207 1.641 - - - - - - 0.818 0.823 - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
8. UHMK1 ENSGALG00000002734 2308 1.622 - - - - - - 0.808 0.814 - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
9. CERCAM ENSGALG00000004986 5158 1.609 - - - - 0.714 - 0.895 - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
10. TUFT1 ENSGALG00000032955 1317 1.502 - - - - - - 0.737 0.765 - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
11. C1orf50 ENSGALG00000004800 4894 0.951 - - - - - - - 0.951 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
12. PRKAB2 ENSGALG00000001678 1999 0.948 - - - - - - - 0.948 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
13. SUN1 ENSGALG00000003781 3442 0.947 - - - - - - - 0.947 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
14. PLA2G12A ENSGALG00000012185 5261 0.942 - - - - - - - 0.942 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
15. STAU2 ENSGALG00000031390 2008 0.938 - - - - - - - 0.938 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
16. gga-mir-1737 ENSGALG00000025206 3910 0.937 - - - - - - - 0.937 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
17. GTF2H4 GTF2H4 5227 0.935 - - - - - - - 0.935 - -
18. NUDT4 ENSGALG00000011285 2998 0.935 - - - - - - - 0.935 - - nudix hydrolase 4, transcript variant X5
19. LSMD1 LSMD1 2562 0.935 - - - - - - - 0.935 - -
20. RPS6KA RPS6KA 6745 0.93 - - - - - - - 0.930 - -
21. MED12L ENSGALG00000010370 765 0.93 - - - - - - - 0.930 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
22. NF1 ENSGALG00000005660 1610 0.929 - - - - - - - 0.929 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
23. ENSGALG00000017324 ENSGALG00000017324 8235 0.929 - - - - - - - 0.929 - -
24. PPM1B ENSGALG00000030691 4513 0.929 - - - - - - - 0.929 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
25. MAP3K4 ENSGALG00000020003 6378 0.928 - - - - - - - 0.928 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
26. MST4 MST4 1931 0.928 - - - - - - - 0.928 - -
27. ENSGALG00000009863 ENSGALG00000009863 7375 0.927 - - - - - - - 0.927 - -
28. ZMYM3 ENSGALG00000005533 2927 0.927 - - - - - - - 0.927 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
29. MCAT ENSGALG00000034275 4598 0.926 - - - - - - - 0.926 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
30. ATG2B ENSGALG00000042088 918 0.926 - - - - - - - 0.926 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
31. DCUN1D2 ENSGALG00000029145 2414 0.925 - - - - - - - 0.925 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
32. TRIP11 ENSGALG00000010763 3146 0.924 - - - - - - - 0.924 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
33. FER1L6 ENSGALG00000033783 196 0.924 - - - - - - - 0.924 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
34. SURF1 ENSGALG00000033754 2130 0.923 - - - - - - - 0.923 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
35. XRCC3 ENSGALG00000011533 3768 0.923 - - - - - - - 0.923 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
36. KIF25 ENSGALG00000011299 2601 0.923 - - - - - - - 0.923 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
37. WDYHV1 ENSGALG00000030059 2961 0.923 - - - - - - - 0.923 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
38. PARPBP ENSGALG00000012756 1895 0.923 - - - - - - - 0.923 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
39. SMPD2 ENSGALG00000033245 462 0.922 - - - - - - - 0.922 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
40. CLUAP1 ENSGALG00000030877 4269 0.922 - - - - - - - 0.922 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
41. SNTB1 ENSGALG00000034528 3907 0.922 - - - - - - - 0.922 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
42. CMTM7 ENSGALG00000011488 1406 0.921 - - - - - - - 0.921 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
43. CHMP2B ENSGALG00000015496 3973 0.921 - - - - - - - 0.921 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
44. ZNF652 ENSGALG00000001279 1188 0.921 - - - - - - - 0.921 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
45. LGALS1_1 ENSGALG00000012420 1560 0.921 - - - - - - - 0.921 - - galectin 1 [Source:NCBI gene;Acc:396491]
46. SMPDL3B ENSGALG00000000737 223 0.921 - - - - - - - 0.921 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
47. CLCN7 ENSGALG00000030826 3173 0.92 - - - - - - - 0.920 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
48. HNMT ENSGALG00000012377 227 0.92 - - - - - - - 0.920 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
49. ARHGAP12 ENSGALG00000007254 479 0.92 - - - - - - - 0.920 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
50. PIBPPDD4L ENSGALG00000003345 1689 0.919 - - - - - - - 0.919 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
51. ZNF142 ENSGALG00000011393 2078 0.919 - - - - - - - 0.919 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
52. STX16 ENSGALG00000007541 6458 0.919 - - - - - - - 0.919 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
53. KAT6B ENSGALG00000005035 301 0.917 - - - - - - - 0.917 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
54. KIAA1239 KIAA1239 263 0.917 - - - - - - - 0.917 - -
55. MICU1 ENSGALG00000004372 1978 0.917 - - - - - - - 0.917 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
56. MACF1 ENSGALG00000003693 1043 0.917 - - - - - - - 0.917 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
57. FAM92A1 FAM92A1 511 0.916 - - - - - - - 0.916 - -
58. SLC16A9 ENSGALG00000003172 266 0.916 - - - - - - - 0.916 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
59. CUL5 ENSGALG00000017165 2480 0.916 - - - - - - - 0.916 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
60. SUV420H1 SUV420H1 2361 0.916 - - - - - - - 0.916 - -
61. VWF ENSGALG00000017272 1012 0.916 - - - - - - - 0.916 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
62. ZBTB24 ENSGALG00000015231 1384 0.915 - - - - - - - 0.915 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
63. PQLC1 ENSGALG00000043150 3133 0.915 - - - - - - 0.915 - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
64. DAB1 ENSGALG00000010857 1085 0.915 - - - - - - - 0.915 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
65. OFD1 ENSGALG00000016576 1916 0.915 - - - - - - - 0.915 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
66. ENSGALG00000003847 ENSGALG00000003847 1220 0.914 - - - - - - - 0.914 - -
67. ANO6 ENSGALG00000009638 470 0.914 - - - - - - - 0.914 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
68. ABCE1 ENSGALG00000009961 958 0.914 - - - - - - - 0.914 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
69. TRAFD1 ENSGALG00000043208 1009 0.914 - - - - - - - 0.914 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
70. FAF1 ENSGALG00000010536 1522 0.914 - - - - - - - 0.914 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
71. DMTF1 ENSGALG00000030844 3584 0.913 - - - - - - - 0.913 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
72. USP12P1 USP12P1 4193 0.913 - - - - - - - 0.913 - -
73. TMEM185A ENSGALG00000009139 4424 0.912 - - - - - - - 0.912 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
74. MPP5 ENSGALG00000009581 724 0.912 - - - - - - - 0.912 - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
75. PRRG1 ENSGALG00000016266 3473 0.91 - - - - - - - 0.910 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
76. GNPAT ENSGALG00000011163 4286 0.909 - - - - - - - 0.909 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
77. TST ENSGALG00000012488 5314 0.909 - - - - - - - 0.909 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
78. POLD3 ENSGALG00000017307 2136 0.908 - - - - - - - 0.908 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
79. NOL12 ENSGALG00000012410 5658 0.908 - - - - - - 0.908 - - - nucleolar protein 12
80. RGN ENSGALG00000016724 3184 0.906 - - - - - - - 0.906 - - regucalcin [Source:NCBI gene;Acc:395480]
81. SERINC1 ENSGALG00000014868 12484 0.904 - - - - - - - 0.904 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
82. COG5 ENSGALG00000042764 4205 0.902 - - - - - - - 0.902 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
83. LAMB1 ENSGALG00000007905 7737 0.902 - - - - - - - 0.902 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
84. OSR1 ENSGALG00000016473 1202 0.901 - - - - - - - 0.901 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
85. SIPA1L2 ENSGALG00000037506 3651 0.9 - - - - - - - 0.900 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
86. ZBED4 ENSGALG00000032659 5313 0.898 - - - - - - - 0.898 - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
87. CENPI ENSGALG00000005038 2608 0.898 - - - - - - - 0.898 - - centromere protein I [Source:NCBI gene;Acc:395207]
88. ESRRG ENSGALG00000009645 2783 0.898 - - - - - - - 0.898 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
89. TNNC1 ENSGALG00000001459 7110 0.897 - - - - - - - 0.897 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
90. DNA2 ENSGALG00000004037 5426 0.896 - - - - - - - 0.896 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
91. PLPPR1 ENSGALG00000015542 3179 0.896 - - - - - - 0.896 - - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
92. PDGF-A PDGF-A 5166 0.892 - - - - - - - 0.892 - -
93. TTPAL ENSGALG00000004244 2734 0.891 - - - - - - - 0.891 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
94. EXOC3 ENSGALG00000013397 4365 0.888 - - - - - - 0.888 - - - exocyst complex component 3 [Source:NCBI gene;Acc:420987]
95. IGFBP7 ENSGALG00000037332 2993 0.888 - - - - - - - 0.888 - - insulin like growth factor binding protein 7, transcript variant X1
96. FBXW5 ENSGALG00000030831 5927 0.887 - - - - - - - 0.887 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
97. MKP3 MKP3 4418 0.882 - - - - - - - 0.882 - -
98. AP3D1 ENSGALG00000000996 16143 0.874 - - - - - - - 0.874 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
99. VAT1 ENSGALG00000002818 10333 0.869 - - - - - - - 0.869 - - vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
100. CNEP1R1 ENSGALG00000029793 6536 0.869 - - - - - - - 0.869 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]

There are 291 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA