Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA6B

Gene Name Gene ID Reads Annotation
SEMA6B ENSGALG00000001171 73 Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]











Genes with expression patterns similar to SEMA6B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA6B ENSGALG00000001171 73 6 - 1.000 1.000 1.000 1.000 - - 1.000 - 1.000 Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
2. CLDN3 ENSGALG00000022557 189 1.701 - - - 1.000 - - - 0.701 - - claudin 3 [Source:NCBI gene;Acc:374029]
3. SMYD3 ENSGALG00000010653 14 1.701 - - - 1.000 - - - 0.701 - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
4. TRPM8 ENSGALG00000004116 2 1.701 - - - 1.000 - - - 0.701 - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
5. TPCN2 ENSGALG00000007550 10 1 - - - 1.000 - - - - - - two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
6. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - 1.000 - - - - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
7. B-G B-G 2 1 - - - 1.000 - - - - - -
8. CFH ENSGALG00000002431 31 1 - - - 1.000 - - - - - - complement factor H, transcript variant X1
9. LRRC9 2 1 - - - 1.000 - - - - - - leucine rich repeat containing 9
10. ENSGALG00000028707 ENSGALG00000028707 9 1 - - - 1.000 - - - - - -
11. PKHD1 ENSGALG00000042136 8 1 - - - 1.000 - - - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
12. KCNJ3 ENSGALG00000012537 6 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
13. ZDHHC1 ENSGALG00000002091 3 1 - - - 1.000 - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
14. LEPR ENSGALG00000011058 4 1 - - - 1.000 - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
15. ABCA12 ENSGALG00000003553 9 1 - - - 1.000 - - - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
16. GABRA6 ENSGALG00000001695 3 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
17. TPO ENSGALG00000016370 98 1 - - - 1.000 - - - - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
18. ENSGALG00000026109 ENSGALG00000026109 2 1 - - - 1.000 - - - - - -
19. FAXC ENSGALG00000015489 0 1 - - - 1.000 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
20. GPR132 ENSGALG00000027407 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 132, transcript variant X2
21. TMEM204 ENSGALG00000029047 8 1 - - - 1.000 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
22. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
23. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
24. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
25. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
26. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
27. PIAS2 ENSGALG00000039434 73 1 - - - - - - - 1.000 - - protein inhibitor of activated STAT 2 [Source:NCBI gene;Acc:416383]
28. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
29. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
30. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
31. OR11A1 ENSGALG00000041229 9 1 - - - - - - - 1.000 - - olfactory receptor family 11 subfamily A member 1
32. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
33. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
34. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
35. FGF19 ENSGALG00000028376 104 1 - - - - - - - 1.000 - - fibroblast growth factor 19 [Source:NCBI gene;Acc:395394]
36. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
37. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
38. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
39. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
40. SULT6B1 ENSGALG00000046375 23 0.992 - - - - - - - 0.992 - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
41. COL21A1 ENSGALG00000016292 35 0.946 - - - - - - - 0.946 - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
42. ENSGALG00000014539 ENSGALG00000014539 31 0.943 - - - 0.943 - - - - - -
43. FADD ENSGALG00000007625 142 0.929 - - - - 0.929 - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
44. ZNF438 ENSGALG00000007266 26 0.912 - - - - - - - 0.912 - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
45. PINLYP ENSGALG00000026884 23 0.898 - - - - - - - - - 0.898 phospholipase A2 inhibitor and LY6/PLAUR domain containing
46. NIPAL4 ENSGALG00000039687 29 0.89 - - - - - - - 0.890 - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
47. BTBD3 ENSGALG00000009028 45 0.888 - - - - - - - 0.888 - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
48. SRGAP2 ENSGALG00000000816 97 0.884 - - - - - - - 0.884 - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
49. MSANTD1 ENSGALG00000015628 154 0.87 - - - - - - - - - 0.870 Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
50. SMAD9 ENSGALG00000017050 11 0.867 - - - - - - - - - 0.867 SMAD family member 9 [Source:NCBI gene;Acc:395543]
51. ENSGALG00000002290 ENSGALG00000002290 6 0.867 - - - - - - - - - 0.867
52. GRIN2A ENSGALG00000007278 17 0.867 - - - - - - - - - 0.867 glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
53. ENSGALG00000007135 ENSGALG00000007135 3 0.867 - - - - - - - - - 0.867
54. AIRE AIRE 3 0.867 - - - - - - - - - 0.867
55. SLC18A2 ENSGALG00000009289 11 0.867 - - - - - - - - - 0.867 solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
56. KPNA7 ENSGALG00000004665 1 0.867 - - - - - - - - - 0.867 karyopherin subunit alpha 7 [Source:HGNC Symbol;Acc:HGNC:21839]
57. TEX14 ENSGALG00000005037 3 0.867 - - - - - - - - - 0.867 testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]
58. ENSGALG00000018376 ENSGALG00000018376 11 0.867 - - - - - - - - - 0.867
59. CITED2 ENSGALG00000013818 4 0.867 - - - - - - - - - 0.867 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
60. CASZ1 ENSGALG00000002888 2 0.867 - - - - - - - - - 0.867 castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
61. gga-let-7d ENSGALG00000018264 1 0.867 - - - - - - - - - 0.867 gga-let-7d [Source:miRBase;Acc:MI0001232]
62. ENSGALG00000004635 ENSGALG00000004635 2 0.867 - - - - - - - - - 0.867
63. ENSGALG00000027945 ENSGALG00000027945 2 0.867 - - - - - - - - - 0.867
64. DBH ENSGALG00000040045 6 0.867 - - - - - - - - - 0.867 dopamine beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:2689]
65. ACOT11 ENSGALG00000010785 4 0.867 - - - - - - - - - 0.867 acyl-CoA thioesterase 11 [Source:HGNC Symbol;Acc:HGNC:18156]
66. CEP57L1 ENSGALG00000015283 22 0.867 - - - - - - - - - 0.867 centrosomal protein 57 like 1 [Source:HGNC Symbol;Acc:HGNC:21561]
67. OGFR ENSGALG00000005609 3 0.867 - - - - - - - - - 0.867 opioid growth factor receptor [Source:HGNC Symbol;Acc:HGNC:15768]
68. HMGCS2 ENSGALG00000002960 54 0.867 - - - - - - - - - 0.867 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
69. SNORD65 SNORD65 3 0.867 - - - - - - - - - 0.867
70. PRUNE2 ENSGALG00000015167 37 0.867 - - - - - - - - - 0.867 prune homolog 2, transcript variant X5
71. CECR5 3 0.867 - - - - - - - - - 0.867 cat eye syndrome chromosome region, candidate 5, transcript variant X2
72. FAM71D ENSGALG00000043908 2 0.867 - - - - - - - - - 0.867 family with sequence similarity 71, member D
73. ENSGALG00000009041 ENSGALG00000009041 27 0.867 - - - - - - - - - 0.867
74. FRY ENSGALG00000017075 8 0.866 - - - - - - - 0.866 - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
75. ENSGALG00000026592 ENSGALG00000026592 4331 0.863 - - - - - - - - - 0.863
76. ENSGALG00000023638 ENSGALG00000023638 16 0.86 - - - 0.860 - - - - - -
77. PDE8A ENSGALG00000005992 10 0.85 - - - - - - - - - 0.850 phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
78. EPHX1L ENSGALG00000010303 16 0.845 - - - 0.845 - - - - - - epoxide hydrolase 1-like
79. ARMC3 ENSGALG00000007864 6 0.835 - - - - - - - - - 0.835 armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
80. U6 U6 3 0.822 - - - - - - - - - 0.822
81. GRIK4 ENSGALG00000006638 22 0.816 - - - 0.816 - - - - - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
82. RRP8 109 0.816 - - - 0.816 - - - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
83. C3orf58 ENSGALG00000002347 27 0.816 - - - 0.816 - - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
84. LRRC19 ENSGALG00000045028 2 0.816 - - - 0.816 - - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
85. CPNE4 ENSGALG00000029235 32 0.81 - - - - - - - - - 0.810 copine 4 [Source:HGNC Symbol;Acc:HGNC:2317]
86. ENSGALG00000014291 ENSGALG00000014291 29 0.794 - - - - 0.794 - - - - -
87. BBS5 ENSGALG00000009846 344 0.788 - - - - 0.788 - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
88. C1R ENSGALG00000014659 9 0.784 - - - - - - - - - 0.784 complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
89. RNF19A ENSGALG00000038772 380 0.784 - - - - - - - - - 0.784 ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
90. CL2 ENSGALG00000011455 87 0.781 - - - - - - - - - 0.781 liver ribonuclease A [Source:NCBI gene;Acc:422633]
91. RASSF6 ENSGALG00000011664 7 0.781 - - - - - - - - - 0.781 Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
92. HOXB9 ENSGALG00000001276 55 0.777 - - - - - - - - - 0.777 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
93. ENSGALG00000010456 ENSGALG00000010456 4 0.777 - - - 0.777 - - - - - -
94. GPR103 GPR103 18 0.772 - - - - - - - - - 0.772
95. CRYBA4 ENSGALG00000005634 56 0.768 - - - - - - - - - 0.768 crystallin beta A4 [Source:NCBI gene;Acc:373998]
96. CCNT2 ENSGALG00000012207 14 0.763 - - - 0.763 - - - - - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
97. GHSR ENSGALG00000027947 24 0.761 - - - - - - - - - 0.761 growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
98. ENSGALG00000019667 ENSGALG00000019667 16 0.761 - - - - - - - - - 0.761
99. CDK12 ENSGALG00000001731 39 0.755 - - - - - - - - - 0.755 cyclin dependent kinase 12 [Source:HGNC Symbol;Acc:HGNC:24224]
100. ENSGALG00000001009 ENSGALG00000001009 6 0.748 - - - - 0.748 - - - - -

There are 119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA