Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SEMA5B

Gene Name Gene ID Reads Annotation
SEMA5B SEMA5B 1316










Genes with expression patterns similar to SEMA5B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SEMA5B SEMA5B 1316 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.755 - 0.756 - - - - 0.999 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
3. CR381544.1 ENSDARG00000088187 821 1.657 0.817 - - - - - - 0.840 -
4. slc6a6a ENSDARG00000012534 183 1.623 0.773 - - - - - - 0.850 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
5. hoxd12a ENSDARG00000059263 795 1.577 0.832 - - - - - - 0.745 - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
6. ECI2 ENSDARG00000102412 848 1.525 0.756 - - - - 0.769 - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
7. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 1.523 0.713 - - - - - - 0.810 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
8. rhbdd2 ENSDARG00000092463 937 1.508 - - - 0.757 - - - 0.751 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
9. PDGFB PDGFB 259 1.471 - - - 0.723 - - - - 0.748
10. BX649281.3 BX649281.3 808 1.459 - - - - - 0.723 - 0.736 -
11. xiap ENSDARG00000016143, ENSDARG00000110199 621 1.444 0.720 0.724 - - - - - - - X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]
12. park7 ENSDARG00000116835 1229 1.435 - 0.714 - - - - - 0.721 - parkinson protein 7 [Source:ZFIN;Acc:ZDB-GENE-041010-5]
13. ensaa ENSDARG00000036944 685 1.43 - - - 0.703 - - - - 0.727 endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
14. SRR SRR 544 1.416 0.708 - - - - - - - 0.708
15. clasp2 ENSDARG00000020345 3382 1 - - - - - - 1.000 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
16. fam133b ENSDARG00000013863 5070 1 - - - - - - 1.000 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
17. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1 - - - - - - 1.000 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
18. sfrp5 ENSDARG00000039041 1777 1 - - - - - - 1.000 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
19. aaas ENSDARG00000102274 1192 1 - - - - - - 1.000 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
20. map7d3 ENSDARG00000060771 1739 1 - - - - - - 1.000 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
21. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1 - - - - - - 1.000 - -
22. foxp1a ENSDARG00000004843 3961 1 - - - - - - 1.000 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
23. si:ch211-71n6.4 ENSDARG00000102234 2499 1 - - - - - - 1.000 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
24. SGPP1 ENSDARG00000060534 1802 1 - - - - - - 1.000 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
25. psmb1 ENSDARG00000009640 8628 1 - - - - - - 1.000 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
26. CR548630.1 CR548630.1 3301 1 - - - - - - 1.000 - -
27. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1 - - - - - - 1.000 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
28. rhoad rhoad 8007 1 - - - - - - 1.000 - -
29. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1 - - - - - - 1.000 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
30. smyd2b ENSDARG00000005629 8181 0.999 - - - - - - 0.999 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
31. CAPN2 CAPN2 1497 0.999 - - - - - - 0.999 - -
32. kpnb1 ENSDARG00000104889 9282 0.999 - - - - - - 0.999 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
33. vbp1 ENSDARG00000030241 10619 0.999 - - - - - - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
34. selt2 12741 0.999 - - - - - - 0.999 - - selenoprotein T, 2
35. klf11a ENSDARG00000030844 3972 0.998 - - - - - - 0.998 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
36. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.998 - - - - - - 0.998 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
37. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.996 - - - - - - 0.996 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
38. hspe1 ENSDARG00000056167 21636 0.995 - - - - - - 0.995 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
39. rpl4 ENSDARG00000041182 18655 0.993 - - - - - - 0.993 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
40. apg3l apg3l 5153 0.993 - - - - - - 0.993 - -
41. sdprb sdprb 13647 0.992 - - - - - - 0.992 - -
42. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.991 - - - - - - 0.991 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
43. syncrip ENSDARG00000040184 24690 0.991 - - - - - - 0.991 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
44. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.991 - - - - - - 0.991 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
45. mybpc3 ENSDARG00000011615 7271 0.988 - - - - - - 0.988 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
46. tnni1al 8272 0.986 - - - - - - 0.986 - - troponin I, skeletal, slow like, transcript variant X1
47. tegt ENSDARG00000077934 27182 0.975 - - - - - - 0.975 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
48. f11r f11r 16668 0.973 - - - - - - 0.973 - -
49. atp2a1l ENSDARG00000035458 6222 0.972 - - - - - - 0.972 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
50. IQCG ENSDARG00000068678 77 0.964 - - - - - - - 0.964 - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
51. heyl ENSDARG00000055798, ENSDARG00000112770 76 0.963 - - - - - - - 0.963 - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
52. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.957 - - - - - - 0.957 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
53. sgcg ENSDARG00000038107 711 0.956 - - - - - - - 0.956 - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
54. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.952 - - - - - - 0.952 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
55. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.952 - - - - - - 0.952 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
56. flna ENSDARG00000074201 26242 0.95 - - - - - - 0.950 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
57. rpf2 ENSDARG00000043960 2719 0.944 - - - - - - - 0.944 - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
58. C20H6orf58_1 C20H6orf58_1 216 0.942 - - - - - - - 0.942 -
59. cirbp cirbp 88363 0.941 - - - - - - 0.941 - -
60. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 0.923 - - - - - - 0.923 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
61. ERO1LB ERO1LB 1433 0.922 - - - - - - - 0.922 -
62. ANK1_1 ANK1_1 507 0.914 - - - - - - - 0.914 -
63. ugt5b2 ENSDARG00000101495 512 0.91 - - - - - - - 0.910 - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
64. dnajc18 ENSDARG00000056005 8084 0.909 - - - - - - - 0.909 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
65. rpl35 ENSDARG00000018334 69583 0.907 - - - - - - 0.907 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
66. cotl1 ENSDARG00000026829 23295 0.905 - - - - - - 0.905 - - coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
67. rps23 ENSDARG00000021838 145026 0.899 - - - - - - 0.899 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
68. h2afvb ENSDARG00000116491 35692 0.896 - - - - - - 0.896 - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
69. RSPH1 289 0.895 - - - - - - - 0.895 - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
70. GRB10 GRB10 1496 0.892 - - - - - - - 0.892 -
71. trappc5 ENSDARG00000026068 1350 0.887 - - - - - - - 0.887 - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
72. rpsa ENSDARG00000019181 93440 0.887 - - - - - - 0.887 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
73. dyrk2 ENSDARG00000094646 2163 0.885 - - - - - - - 0.885 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
74. si:ch211-241b2.1 ENSDARG00000102950 526 0.884 - - - - - - - 0.884 - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
75. ddb1 ENSDARG00000074431 1054 0.883 - - - - - - - 0.883 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
76. si:ch211-266d19.4 ENSDARG00000012642 1251 0.88 - - - - - - - 0.880 - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
77. relb ENSDARG00000086173 762 0.876 - - - - - - - 0.876 - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
78. sphk2 ENSDARG00000069893 1518 0.872 0.872 - - - - - - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
79. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 0.871 - 0.871 - - - - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
80. kif5bb 1645 0.869 - - - - - - - 0.869 - kinesin family member 5B, b
81. syn2a ENSDARG00000045945 434 0.865 - - - - - - - 0.865 - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
82. tnni2b.1 ENSDARG00000035958 51597 0.864 - - - - - - 0.864 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
83. ankdd1b ENSDARG00000025866 51 0.862 - - - - - - - 0.862 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
84. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.861 - - - - - - - 0.861 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
85. pde6b ENSDARG00000011671 44 0.861 - - - - - - - 0.861 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
86. VDAC3 ENSDARG00000003695 34 0.861 - - - - - - - 0.861 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
87. si:dkey-100h21.2 si:dkey-100h21.2 30 0.861 - - - - - - - 0.861 -
88. spef2 ENSDARG00000098330 59 0.861 - - - - - - - 0.861 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
89. si:ch73-167f18.3 si:ch73-167f18.3 78 0.861 - - - - - - - 0.861 -
90. jam3a ENSDARG00000114589 630 0.861 - - - - - - - 0.861 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
91. adcyap1a ENSDARG00000004015 67 0.86 - - - - - - - 0.860 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
92. IKZF4 ENSDARG00000037068 36 0.86 - - - - - - - 0.860 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
93. ALPK1 195 0.859 - - - - - - - 0.859 - alpha-kinase 1
94. KBTBD13_1 KBTBD13_1 116 0.859 - - - - - - - 0.859 -
95. pus7 ENSDARG00000031774 195 0.859 - - - - - - - 0.859 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
96. hoxa4a 37 0.859 - - - - - - - 0.859 - homeobox A4a, transcript variant X4
97. mir130b 180 0.859 - - - - - - - 0.859 - microRNA 130b
98. rpgra ENSDARG00000056617 77 0.859 - - - - - - - 0.859 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
99. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.858 - - - - - - - 0.858 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
100. adora1 adora1 149 0.858 - - - - - - - 0.858 -

There are 669 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA