Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA5B

Gene Name Gene ID Reads Annotation
SEMA5B ENSGALG00000011686 4184 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]











Genes with expression patterns similar to SEMA5B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA5B ENSGALG00000011686 4184 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
2. UBE2V1 ENSGALG00000008015 17947 1.612 - - - - - - 0.745 0.867 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
3. DENND1A ENSGALG00000001157 503 0.987 - - - - - - - 0.987 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
4. HTRA1 ENSGALG00000041140 1750 0.987 - - - - - - - 0.987 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
5. LAMA4 ENSGALG00000015001 993 0.986 - - - - - - - 0.986 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
6. ARID1B ENSGALG00000013683 3397 0.986 - - - - - - - 0.986 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
7. CACTIN ENSGALG00000024391 1408 0.986 - - - - - - - 0.986 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
8. MYO3A ENSGALG00000007647 643 0.985 - - - - - - - 0.985 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
9. GALNT2 ENSGALG00000011106 167 0.985 - - - - - - - 0.985 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
10. THBS4 ENSGALG00000014804 4228 0.985 - - - - - - - 0.985 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
11. KLHL13 KLHL13 2712 0.985 - - - - - - - 0.985 - -
12. ILKAP ENSGALG00000006253 7388 0.985 - - - - - - - 0.985 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
13. GAS6 ENSGALG00000016820 481 0.985 - - - - - - - 0.985 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
14. LIN28A ENSGALG00000036022 542 0.985 - - - - - - - 0.985 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
15. GATAD2A ENSGALG00000042900 6337 0.985 - - - - - - - 0.985 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
16. C14orf105 C14orf105 135 0.984 - - - - - - - 0.984 - -
17. gga-mir-1723 ENSGALG00000025386 6662 0.984 - - - - - - - 0.984 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
18. PIK3R3 ENSGALG00000010335 374 0.984 - - - - - - - 0.984 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
19. FNDC5 ENSGALG00000003567 3328 0.984 - - - - - - - 0.984 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
20. NPB NPB 8056 0.984 - - - - - - - 0.984 - -
21. MMP16 ENSGALG00000032031 827 0.984 - - - - - - - 0.984 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
22. H2AFY2 ENSGALG00000004794 576 0.984 - - - - - - - 0.984 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
23. ENSGALG00000029113 ENSGALG00000029113 737 0.984 - - - - - - - 0.984 - -
24. PTN ENSGALG00000040493 864 0.984 - - - - - - - 0.984 - - pleiotrophin [Source:NCBI gene;Acc:418125]
25. ETAA1 ENSGALG00000027922 1684 0.983 - - - - - - - 0.983 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
26. ZUFSP 549 0.983 - - - - - - - 0.983 - - zinc finger with UFM1 specific peptidase domain
27. PTER ENSGALG00000008728 162 0.983 - - - - - - - 0.983 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
28. ARHGEF12 ENSGALG00000006663 1369 0.983 - - - - - - - 0.983 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
29. PALD1 ENSGALG00000004465 3553 0.983 - - - - - - - 0.983 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
30. HNRNPK ENSGALG00000012591 1109 0.983 - - - - - - - 0.983 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
31. TMEM237 ENSGALG00000008381 1317 0.983 - - - - - - - 0.983 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
32. PLEKHA3 ENSGALG00000009135 1700 0.983 - - - - - - - 0.983 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
33. FAAH ENSGALG00000010433 3309 0.983 - - - - - - - 0.983 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
34. RFLB RFLB 140 0.983 - - - - - - - 0.983 - -
35. SMAD1 ENSGALG00000009977 3540 0.983 - - - - - - - 0.983 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
36. TMEM245 ENSGALG00000013138 501 0.982 - - - - - - - 0.982 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
37. LEMD2 ENSGALG00000002870 2803 0.982 - - - - - - - 0.982 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
38. SRFBP1 ENSGALG00000005316 6826 0.982 - - - - - - - 0.982 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
39. PCP4 ENSGALG00000022819 880 0.982 - - - - - - - 0.982 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
40. SEMA7A ENSGALG00000001412 1505 0.982 - - - - - - - 0.982 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
41. LDLRAP1 ENSGALG00000001051 1657 0.981 - - - - - - - 0.981 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
42. C2CD5 ENSGALG00000013210 3060 0.981 - - - - - - - 0.981 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
43. CDK14 ENSGALG00000009062 995 0.981 - - - - - - - 0.981 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
44. PLPPR1 ENSGALG00000015542 3179 0.981 - - - - - - - 0.981 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
45. ARRDC2 ENSGALG00000003527 1797 0.981 - - - - - - - 0.981 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
46. C1orf123 ENSGALG00000026516 3227 0.98 - - - - - - - 0.980 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
47. SEC24B ENSGALG00000035482 3430 0.98 - - - - - - - 0.980 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
48. MEIS1 ENSGALG00000041626 3865 0.979 - - - - - - - 0.979 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
49. LTN1 ENSGALG00000015804 3784 0.978 - - - - - - - 0.978 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
50. ARL1 ENSGALG00000011651 3230 0.977 - - - - - - - 0.977 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
51. AEN ENSGALG00000044204 2633 0.977 - - - - - - - 0.977 - - apoptosis enhancing nuclease, transcript variant X1
52. ARHGAP32 ENSGALG00000043511 7916 0.977 - - - - - - - 0.977 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
53. C6ORF162 C6ORF162 4217 0.977 - - - - - - - 0.977 - -
54. B4GALT3 ENSGALG00000022891 2825 0.976 - - - - - - - 0.976 - - beta-1,4-galactosyltransferase 3
55. C11H19ORF12 C11H19ORF12 5149 0.976 - - - - - - - 0.976 - -
56. RIPK1 ENSGALG00000012827 3405 0.976 - - - - - - - 0.976 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
57. SMAD2W ENSGALG00000014184 1773 0.975 - - - - - - - 0.975 - - SMAD family member 2-W, transcript variant X3
58. ARNT ENSGALG00000000751 3495 0.975 - - - - - - - 0.975 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
59. SPRYD7 ENSGALG00000017010 1910 0.974 - - - - - - - 0.974 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
60. PSD2 ENSGALG00000030836 236 0.974 - - - - - - - 0.974 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
61. BLZF1 ENSGALG00000015225 3594 0.974 - - - - - - - 0.974 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
62. SKIV2L2 ENSGALG00000014709 2926 0.973 - - - - - - - 0.973 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
63. CDXB CDXB 143 0.973 - - - - - - - 0.973 - -
64. ENSGALG00000007355 ENSGALG00000007355 2149 0.973 - - - - - - - 0.973 - -
65. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.97 - - - - - - - 0.970 - -
66. RERG ENSGALG00000028186 1124 0.97 - - - - - - - 0.970 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
67. C4H4ORF41 C4H4ORF41 1520 0.97 - - - - - - - 0.970 - -
68. PRPSAP2 ENSGALG00000005064 5549 0.97 - - - - - - - 0.970 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
69. AK1 ENSGALG00000029150 5935 0.969 - - - - - - - 0.969 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
70. LRRFIP2 ENSGALG00000033102 8250 0.969 - - - - - - - 0.969 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
71. HEATR6 ENSGALG00000005516 3347 0.969 - - - - - - - 0.969 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
72. TMEM47 ENSGALG00000027198 3619 0.968 - - - - - - - 0.968 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
73. SMPD4 ENSGALG00000006455 2270 0.968 - - - - - - - 0.968 - - sphingomyelin phosphodiesterase 4, transcript variant X1
74. TMEM144 ENSGALG00000026253 1744 0.968 - - - - - - - 0.968 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
75. DNTTIP1 ENSGALG00000003575 4687 0.968 - - - - - - - 0.968 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
76. NOL6 ENSGALG00000030730 7191 0.967 - - - - - - - 0.967 - - nucleolar protein 6
77. SYAP1 ENSGALG00000016548 3347 0.967 - - - - - - - 0.967 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
78. TDRD3 ENSGALG00000016936 3412 0.965 - - - - - - - 0.965 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
79. SNX3 ENSGALG00000015304 1631 0.963 - - - - - - - 0.963 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
80. YOD1 ENSGALG00000037597 2989 0.963 - - - - - - - 0.963 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
81. GID8 ENSGALG00000005700 3992 0.962 - - - - - - - 0.962 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
82. UBXN2B ENSGALG00000030585 2177 0.96 - - - - - - - 0.960 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
83. SGPL1 ENSGALG00000004553 4520 0.958 - - - - - - - 0.958 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
84. CTNNBIP1 ENSGALG00000026306 8049 0.957 - - - - - - - 0.957 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
85. ATRIP ENSGALG00000004670 3647 0.956 - - - - - - - 0.956 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
86. SMU1 ENSGALG00000002014 8136 0.953 - - - - - - - 0.953 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
87. PAXIP1 ENSGALG00000036064 3120 0.951 - - - - - - - 0.951 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
88. HIBADH ENSGALG00000033207 3540 0.949 - - - - - - - 0.949 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
89. THAP5 ENSGALG00000009494 6540 0.947 - - - - - - - 0.947 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
90. ALX-4 ALX-4 2351 0.945 - - - - - - - 0.945 - -
91. CUL4B ENSGALG00000008559 16864 0.943 - - - - - - - 0.943 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
92. RAD50 ENSGALG00000006794 4308 0.942 - - - - - - - 0.942 - - RAD50 double strand break repair protein, transcript variant X4
93. AHR ENSGALG00000010836 2276 0.942 - - - - - - - 0.942 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
94. MLX ENSGALG00000003199 5286 0.941 - - - - - - - 0.941 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
95. HSDL2 ENSGALG00000015663 8966 0.941 - - - - - - - 0.941 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
96. TAF7 4725 0.94 - - - - - - - 0.940 - - TATA-box binding protein associated factor 7, transcript variant X1
97. CZH9ORF80 CZH9ORF80 12760 0.932 - - - - - - - 0.932 - -
98. SPATS2L ENSGALG00000008152 3037 0.93 - - - - - - - 0.930 - - spermatogenesis associated serine rich 2 like [Source:NCBI gene;Acc:424067]
99. SLIT2 ENSGALG00000041121 3223 0.928 - - - - - - - 0.928 - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
100. PRMT3 ENSGALG00000003958 14160 0.927 - - - - - - - 0.927 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]

There are 84 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA