Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3F

Gene Name Gene ID Reads Annotation
SEMA3F ENSGALG00000029621 2079 semaphorin 3F [Source:NCBI gene;Acc:374109]











Genes with expression patterns similar to SEMA3F

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3F ENSGALG00000029621 2079 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 3F [Source:NCBI gene;Acc:374109]
2. VASH1 ENSGALG00000043036 1235 0.997 - - - - - - - 0.997 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
3. LIPA ENSGALG00000006378 4414 0.996 - - - - - - - 0.996 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
4. KPNA4 ENSGALG00000009549 3674 0.996 - - - - - - - 0.996 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
5. FTSJ2 FTSJ2 2951 0.996 - - - - - - - 0.996 - -
6. ENSGALG00000001591 ENSGALG00000001591 784 0.996 - - - - - - - 0.996 - -
7. RASGEF1B 2014 0.995 - - - - - - - 0.995 - - RasGEF domain family member 1B, transcript variant X8
8. WNK2 ENSGALG00000038850 4712 0.995 - - - - - - - 0.995 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
9. LOC420160 ENSGALG00000004252 188 0.995 - - - - - - - 0.995 - - cathepsin L1-like, transcript variant X3
10. SETD2 ENSGALG00000042051 2981 0.995 - - - - - - - 0.995 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
11. NCS1 ENSGALG00000012710 1104 0.995 - - - - - - - 0.995 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
12. SLX4 ENSGALG00000031841 1208 0.995 - - - - - - - 0.995 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
13. FPGT ENSGALG00000026958 788 0.995 - - - - - - - 0.995 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
14. TBCE ENSGALG00000013950 3076 0.994 - - - - - - - 0.994 - - tubulin folding cofactor E
15. NKX-6.2 NKX-6.2 1370 0.994 - - - - - - - 0.994 - -
16. CAPN9 158 0.994 - - - - - - - 0.994 - - calpain 9
17. SLC26A8 ENSGALG00000040498 253 0.994 - - - - - - - 0.994 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
18. GNE ENSGALG00000015331 1577 0.994 - - - - - - - 0.994 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
19. TOR1B TOR1B 197 0.994 - - - - - - - 0.994 - -
20. CAPRIN2 1473 0.994 - - - - - - - 0.994 - - caprin family member 2, transcript variant X7
21. YTHDF3 ENSGALG00000039774 170 0.994 - - - - - - - 0.994 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
22. NR3C2 ENSGALG00000010035 603 0.993 - - - - - - - 0.993 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
23. GNB1L ENSGALG00000001925 1981 0.993 - - - - - - - 0.993 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
24. CHST2 ENSGALG00000034507 6172 0.992 - - - - - - - 0.992 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
25. HIP1R ENSGALG00000031511 1981 0.991 - - - - - - - 0.991 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
26. ENSGALG00000005615 ENSGALG00000005615 4354 0.99 - - - - - - - 0.990 - -
27. AARSD1 ENSGALG00000002880 3068 0.99 - - - - - - - 0.990 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
28. PLA2G7 ENSGALG00000016713 2100 0.99 - - - - - - - 0.990 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
29. MAP4K5 ENSGALG00000012321 3036 0.99 - - - - - - - 0.990 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
30. C2CD2 ENSGALG00000016148 2734 0.989 - - - - - - - 0.989 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
31. FNTA ENSGALG00000015397 3741 0.989 - - - - - - - 0.989 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
32. WDR82 ENSGALG00000025904 4783 0.988 - - - - - - - 0.988 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
33. TLN2 2295 0.988 - - - - - - - 0.988 - - talin 2, transcript variant X5
34. HMOX1 ENSGALG00000012550 1186 0.987 - - - - - - - 0.987 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
35. FGD5 ENSGALG00000008546 4031 0.987 - - - - - - - 0.987 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
36. CXorf23 1582 0.987 - - - - - - - 0.987 - - chromosome X open reading frame 23, transcript variant X3
37. EXOSC1 ENSGALG00000039917 5259 0.987 - - - - - - - 0.987 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
38. HVCN1 ENSGALG00000004562 2550 0.985 - - - - - - - 0.985 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
39. C5orf63 C5orf63 3718 0.985 - - - - - - - 0.985 - -
40. PAM16 9684 0.985 - - - - - - - 0.985 - - presequence translocase associated motor 16 homolog, transcript variant X2
41. DLGAP4 ENSGALG00000001046 6872 0.984 - - - - - - - 0.984 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
42. CABLES1 ENSGALG00000014998 1636 0.984 - - - - - - - 0.984 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
43. C1orf21 ENSGALG00000020922 4035 0.984 - - - - - - - 0.984 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
44. UBE2Q2 3861 0.983 - - - - - - - 0.983 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
45. UTP23 ENSGALG00000032400 3601 0.983 - - - - - - - 0.983 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
46. VPS26A ENSGALG00000004174 9198 0.983 - - - - - - - 0.983 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
47. MRPL10 ENSGALG00000014387 12386 0.981 - - - - - - - 0.981 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
48. POLDIP2 ENSGALG00000003211 11664 0.981 - - - - - - - 0.981 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
49. FGD3 ENSGALG00000005237 4410 0.98 - - - - - - - 0.980 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
50. ITCH ENSGALG00000040474 2646 0.98 - - - - - - - 0.980 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
51. RABL5 RABL5 5264 0.98 - - - - - - - 0.980 - -
52. CTSA ENSGALG00000006876 5380 0.979 - - - - - - - 0.979 - - cathepsin A [Source:NCBI gene;Acc:428163]
53. WDR45B ENSGALG00000001563 5870 0.975 - - - - - - - 0.975 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
54. TAF12 ENSGALG00000000991 8709 0.975 - - - - - - - 0.975 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
55. AKR1B10L3 ENSGALG00000019284 5869 0.973 - - - - - - - 0.973 - - aldo-keto reductase family 1 member B10-like 3
56. EMC1 ENSGALG00000003969 6876 0.972 - - - - - - - 0.972 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
57. CPEB2 ENSGALG00000014516 1187 0.969 - - - - - - - 0.969 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
58. UBE2J2 ENSGALG00000001848 6527 0.968 - - - - - - - 0.968 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
59. TARS ENSGALG00000003288 12702 0.967 - - - - - - - 0.967 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
60. METTL6 ENSGALG00000040665 4467 0.967 - - - - - - - 0.967 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
61. C10orf11 C10orf11 3087 0.964 - - - - - - - 0.964 - -
62. ENSGALG00000020092 ENSGALG00000020092 3067 0.963 - - - - - - - 0.963 - -
63. MBNL2 ENSGALG00000016890 3162 0.962 - - - - - - - 0.962 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
64. TYW3 ENSGALG00000032549 4869 0.96 - - - - - - - 0.960 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
65. MRPL28 ENSGALG00000007473 19134 0.96 - - - - - - - 0.960 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
66. CDC73 ENSGALG00000002469 4586 0.958 - - - - - - - 0.958 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
67. SRP9 ENSGALG00000026009 12418 0.954 - - - - - - - 0.954 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
68. TCEA2 ENSGALG00000005976 9143 0.951 - - - - - - - 0.951 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
69. SRPK2 ENSGALG00000008154 7385 0.951 - - - - - - - 0.951 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
70. PCDH1 ENSGALG00000002553 2938 0.948 - - - - - - - 0.948 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
71. PHF20L1 ENSGALG00000033205 7598 0.947 - - - - - - - 0.947 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
72. POLR2C ENSGALG00000001168 10703 0.947 - - - - - - - 0.947 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
73. TNRC6A ENSGALG00000006068 9166 0.942 - - - - - - - 0.942 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
74. LUC7L3 ENSGALG00000007386 11944 0.934 - - - - - - - 0.934 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
75. NPEPL1 ENSGALG00000007533 5908 0.925 - - - - - - - 0.925 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
76. HIPK3 ENSGALG00000011695 6842 0.921 - - - - - - - 0.921 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
77. THOC2 ENSGALG00000008507 9501 0.917 - - - - - - - 0.917 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
78. APPBP2 ENSGALG00000005314 6447 0.901 - - - - - - - 0.901 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
79. ASPM ENSGALG00000032398 12784 0.895 - - - - - - - 0.895 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
80. COX16 ENSGALG00000020449 5959 0.89 - - - - - - - 0.890 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
81. RALBP1 ENSGALG00000008405 13780 0.885 - - - - - - - 0.885 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
82. NID2 ENSGALG00000012394 6717 0.884 - - - - - - - 0.884 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
83. ZNF451 ENSGALG00000016282 3380 0.884 - - - - - - - 0.884 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
84. FBXO4 ENSGALG00000014851 2333 0.883 - - - - - - - 0.883 - - F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]
85. ARIH2 ENSGALG00000006956 3692 0.877 - - - - - - - 0.877 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
86. MOB4 ENSGALG00000008128 10322 0.876 - - - - - - - 0.876 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
87. GPHN ENSGALG00000009587 3045 0.865 - - - - - - - 0.865 - - gephyrin [Source:NCBI gene;Acc:428878]
88. CCT8 ENSGALG00000015821 12161 0.861 - - - - - - - 0.861 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
89. OCC-1 OCC-1 1887 0.859 - - - - - - - 0.859 - -
90. KMT2C 6306 0.858 - - - - - - - 0.858 - - lysine methyltransferase 2C, transcript variant X14
91. ENSGALG00000007574 ENSGALG00000007574 7695 0.858 - - - - - - - 0.858 - -
92. MTO1 ENSGALG00000015923 4418 0.857 - - - - - - - 0.857 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
93. gga-mir-1610 ENSGALG00000025580 3985 0.856 - - - - - - - 0.856 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
94. NPM3 ENSGALG00000032329 21138 0.856 - - - - - - - 0.856 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
95. CCAR1 ENSGALG00000004108 13219 0.855 - - - - - - - 0.855 - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
96. RAP1A ENSGALG00000001476 5287 0.846 - - - - - - - 0.846 - - RAP1A, member of RAS oncogene family
97. CSK ENSGALG00000031270 11541 0.845 - - - - - - - 0.845 - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
98. PXDN ENSGALG00000016377 4255 0.84 - - - - - - - 0.840 - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
99. PPFIBP1 ENSGALG00000014106 9864 0.838 - - - - - - - 0.838 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
100. SERBP1 ENSGALG00000011229 30489 0.835 - - - - - - - 0.835 - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]

There are 49 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA