Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3E

Gene Name Gene ID Reads Annotation
SEMA3E ENSGALG00000038225 677 semaphorin 3E [Source:NCBI gene;Acc:374089]











Genes with expression patterns similar to SEMA3E

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3E ENSGALG00000038225 677 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 3E [Source:NCBI gene;Acc:374089]
2. SLC25A48 ENSGALG00000006341 2606 1.777 - - - - - - - 0.977 0.800 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
3. RIN3 ENSGALG00000010806 729 1.725 - - - - - - - 0.970 0.755 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
4. TRIM71 ENSGALG00000019622 1633 1.708 - - - - - - - 0.906 0.802 - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
5. H4-I H4-I 2327 1.665 - - - - - - - 0.948 0.717 -
6. TM2D3 ENSGALG00000026271 2566 1.657 - - - - - - - 0.955 0.702 - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
7. RBBP8 ENSGALG00000014982 3255 1.641 - - - - - - - 0.741 0.900 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
8. LTV1 ENSGALG00000013765 2917 1.597 - - - - - - - 0.890 0.707 - LTV1 ribosome biogenesis factor
9. VPS37A ENSGALG00000013646 55 0.998 - - - - - - - 0.998 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
10. GAA ENSGALG00000038853 158 0.998 - - - - - - - 0.998 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
11. TMEM200A ENSGALG00000002282 77 0.998 - - - - - - - 0.998 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
12. CWH43 ENSGALG00000041921 68 0.998 - - - - - - - 0.998 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
13. SLC30A2 ENSGALG00000010375 44 0.997 - - - - - - - 0.997 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
14. MDM4 ENSGALG00000000636 91 0.997 - - - - - - - 0.997 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
15. EX-FABP EX-FABP 516 0.997 - - - - - - - 0.997 - -
16. TRIM62 ENSGALG00000028437 5124 0.996 - - - - - - - 0.996 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
17. TFG ENSGALG00000015299 849 0.996 - - - - - - - 0.996 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
18. FUBP1 ENSGALG00000008939 2850 0.996 - - - - - - - 0.996 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
19. LAMP2 ENSGALG00000008572 198 0.995 - - - - - - - 0.995 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
20. YARS2 503 0.995 - - - - - - - 0.995 - - tyrosyl-tRNA synthetase 2
21. LIPG ENSGALG00000043734 2490 0.993 - - - - - - - 0.993 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
22. KIAA0930 ENSGALG00000014226 1243 0.993 - - - - - - - 0.993 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
23. ENSGALG00000016572 ENSGALG00000016572 79 0.992 - - - - - - - 0.992 - -
24. DSG2 ENSGALG00000015142 67 0.992 - - - - - - - 0.992 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
25. PHLPP2 ENSGALG00000000875 561 0.99 - - - - - - - 0.990 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
26. II II 929 0.99 - - - - - - - 0.990 - -
27. B3GNT7 ENSGALG00000007701 929 0.989 - - - - - - - 0.989 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
28. TRMT61B ENSGALG00000008979 615 0.988 - - - - - - - 0.988 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
29. ENSGALG00000001854 ENSGALG00000001854 965 0.987 - - - - - - - 0.987 - -
30. DNAJC11 ENSGALG00000000627 769 0.984 - - - - - - - 0.984 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
31. CHUK ENSGALG00000003289 5698 0.983 - - - - - - - 0.983 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
32. PYGL ENSGALG00000012365 4691 0.983 - - - - - - - 0.983 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
33. LOC422106 ENSGALG00000019757 453 0.982 - - - - - - - 0.982 - - uncharacterized LOC422106
34. ANXA6 ENSGALG00000004357 2891 0.981 - - - - - - - 0.981 - - annexin A6 [Source:NCBI gene;Acc:395481]
35. HSPA13 ENSGALG00000019201 712 0.98 - - - - - - - 0.980 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
36. RASGEF1A ENSGALG00000002525 918 0.98 - - - - - - - 0.980 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
37. SOX5 ENSGALG00000032768 998 0.979 - - - - - - - 0.979 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
38. C4BPA ENSGALG00000001175 4278 0.977 - - - - - - - 0.977 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
39. CECR5L ENSGALG00000005020 116 0.977 - - - - - - - 0.977 - - cat eye syndrome chromosome region, candidate 5-like
40. SENP5 ENSGALG00000008545 909 0.977 - - - - - - - 0.977 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
41. MRC1 ENSGALG00000008629 259 0.977 - - - - - - - 0.977 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
42. ORAI1 ENSGALG00000004240 515 0.976 - - - - - - - 0.976 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
43. ARAP2 ENSGALG00000041373 233 0.976 - - - - - - - 0.976 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
44. TRAM2 ENSGALG00000016673 438 0.975 - - - - - - - 0.975 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
45. CASP7 ENSGALG00000008933 506 0.975 - - - - - - - 0.975 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
46. CCDC51 ENSGALG00000006465 1845 0.973 - - - - - - - 0.973 - - coiled-coil domain containing 51, transcript variant X1
47. TES ENSGALG00000031934 5908 0.973 - - - - - - - 0.973 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
48. TOX ENSGALG00000039102 1434 0.973 - - - - - - - 0.973 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
49. GADD45 GADD45 8780 0.972 - - - - - - - 0.972 - -
50. PAMR1 ENSGALG00000007886 928 0.971 - - - - - - - 0.971 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
51. CENPC1 CENPC1 3324 0.97 - - - - - - - 0.970 - -
52. AMER1 ENSGALG00000007599 994 0.968 - - - - - - - 0.968 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
53. HDAC4 ENSGALG00000004288 2124 0.966 - - - - - - - 0.966 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
54. ZBTB26 ENSGALG00000042762 1920 0.966 - - - - - - - 0.966 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
55. HSDL1 ENSGALG00000003273 1108 0.965 - - - - - - - 0.965 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
56. NIT1 ENSGALG00000007585 1256 0.965 - - - - - - - 0.965 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
57. CLUH ENSGALG00000005854 2100 0.965 - - - - - - - 0.965 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
58. EDA ENSGALG00000035966 602 0.963 - - - - - - - 0.963 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
59. ISCA2 ENSGALG00000020417 1130 0.961 - - - - - - - 0.961 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
60. COL6A2 ENSGALG00000039216 892 0.96 - - - - - - - 0.960 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
61. NRG4 ENSGALG00000002952 1440 0.959 - - - - - - - 0.959 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
62. LRRC45 ENSGALG00000002877 1751 0.958 - - - - - - - 0.958 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
63. ANKRD40L ENSGALG00000026189 887 0.957 - - - - - - - 0.957 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
64. ENSGALG00000006569 ENSGALG00000006569 2169 0.956 - - - - - - - 0.956 - -
65. STK17B ENSGALG00000007924 519 0.956 - - - - - - - 0.956 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
66. TCEANC ENSGALG00000016581 948 0.956 - - - - - - - 0.956 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
67. UBA7 ENSGALG00000036263 2918 0.955 - - - - - - - 0.955 - - ubiquitin-like modifier activating enzyme 7
68. LDHA ENSGALG00000006300 4796 0.951 - - - - - - - 0.951 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
69. GJB6 ENSGALG00000017136 500 0.949 - - - - - - - 0.949 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
70. CHALK5 CHALK5 1351 0.947 - - - - - - - 0.947 - -
71. ECI2 ENSGALG00000012809 3692 0.945 - - - - - - - 0.945 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
72. ABCB10 ENSGALG00000011096 1407 0.944 - - - - - - - 0.944 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
73. SLC41A1 ENSGALG00000000721 1604 0.943 - - - - - - - 0.943 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
74. PRPSAP1 ENSGALG00000021539 3517 0.941 - - - - - - - 0.941 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
75. LRAT ENSGALG00000009276 220 0.94 - - - - - - - 0.940 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
76. GPX7 ENSGALG00000010633 7224 0.938 - - - - - - - 0.938 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
77. CHKA ENSGALG00000036754 5077 0.938 - - - - - - - 0.938 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
78. MAPKKK3L ENSGALG00000005884 1011 0.938 - - - - - - - 0.938 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
79. SEC11C ENSGALG00000031663 4266 0.937 - - - - - - - 0.937 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
80. DBR1 ENSGALG00000043797 1896 0.936 - - - - - - - 0.936 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
81. TXNRD1 ENSGALG00000035345 4784 0.935 - - - - - - - - 0.935 - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
82. LPIN1 ENSGALG00000016456 1044 0.934 - - - - - - - 0.934 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
83. ENSGALG00000004032 ENSGALG00000004032 2010 0.934 - - - - - - - 0.934 - -
84. FLRT3 ENSGALG00000008716 593 0.93 - - - - - - - - 0.930 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
85. SALL1 ENSGALG00000039238 3740 0.929 - - - - - - - 0.929 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
86. PSMD1 ENSGALG00000007664 7609 0.927 - - - - - - - 0.927 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
87. PINK1 ENSGALG00000037593 3794 0.927 - - - - - - - 0.927 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
88. TUSC3 ENSGALG00000013674 2848 0.923 - - - - - - - 0.923 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
89. PDXDC1 ENSGALG00000034829 406 0.922 - - - - - - - - 0.922 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
90. XPOT ENSGALG00000009835 2953 0.918 - - - - - - - - 0.918 - exportin for tRNA [Source:NCBI gene;Acc:417824]
91. NXT2 ENSGALG00000008092 2477 0.918 - - - - - - - 0.918 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
92. MSRB1 ENSGALG00000005414 4197 0.913 - - - - - - - 0.913 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
93. CGT CGT 948 0.912 - - - - - - - 0.912 - -
94. E2F4 ENSGALG00000001722 2916 0.911 - - - - - - - 0.911 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
95. FA2H ENSGALG00000002775 396 0.909 - - - - - - - 0.909 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
96. PCLO 249 0.908 - - - - - - - - 0.908 - piccolo presynaptic cytomatrix protein
97. FASTKD3 ENSGALG00000033521 1186 0.907 - - - - - - - - 0.907 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
98. GALK2 ENSGALG00000036201 1016 0.906 - - - - - - - 0.906 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
99. RPAP2 ENSGALG00000005953 2085 0.905 - - - - - - - 0.905 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
100. TBX3 ENSGALG00000036043 2888 0.905 - - - - - - - 0.905 - - T-box 3 [Source:NCBI gene;Acc:374202]

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA