Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3C

Gene Name Gene ID Reads Annotation
SEMA3C ENSGALG00000040444 5404 semaphorin 3C [Source:NCBI gene;Acc:374090]











Genes with expression patterns similar to SEMA3C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3C ENSGALG00000040444 5404 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 3C [Source:NCBI gene;Acc:374090]
2. MAN1A1 ENSGALG00000014878 1061 1.776 - - 0.814 - - - - 0.962 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
3. TSPAN5 ENSGALG00000012227 8703 1.76 - - - - - - 0.794 0.966 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
4. LMO4 ENSGALG00000006252 3686 1.754 - - 0.787 - - - - 0.967 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
5. SECISBP2 ENSGALG00000010694 6990 1.675 - - 0.712 - - - - 0.963 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
6. CNOT2 ENSGALG00000010042 7612 0.981 - - - - - - - 0.981 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
7. POLR1E ENSGALG00000005395 8953 0.978 - - - - - - - 0.978 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
8. PNPT1 ENSGALG00000043545 1306 0.974 - - - - - - - 0.974 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
9. ACTR3B ENSGALG00000006292 2235 0.974 - - - - - - - 0.974 - - ARP3 actin related protein 3 homolog B, transcript variant X1
10. KIAA1551 ENSGALG00000045168 3435 0.974 - - - - - - - 0.974 - - KIAA1551, transcript variant X1
11. BOC ENSGALG00000015152 4868 0.973 - - - - - - - 0.973 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
12. SURF2 ENSGALG00000003181 3500 0.973 - - - - - - - 0.973 - - surfeit 2 [Source:NCBI gene;Acc:417156]
13. PDHX ENSGALG00000033753 2799 0.973 - - - - - - - 0.973 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
14. ASAP2 ENSGALG00000016419 1393 0.972 - - - - - - - 0.972 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
15. SLC37A4 ENSGALG00000007716 2263 0.971 - - - - - - - 0.971 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
16. PDCD7 ENSGALG00000021027 3807 0.971 - - - - - - - 0.971 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
17. CCNI ENSGALG00000011457 3203 0.97 - - - - - - - 0.970 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
18. MED20 ENSGALG00000003474 4583 0.969 - - - - - - - 0.969 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
19. CLASP2 ENSGALG00000032647 1821 0.969 - - - - - - - 0.969 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
20. RBM34 ENSGALG00000029915 5618 0.969 - - - - - - - 0.969 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
21. ENSGALG00000005785 ENSGALG00000005785 1570 0.969 - - - - - - - 0.969 - -
22. TBC1D16 ENSGALG00000007054 2324 0.969 - - - - - - - 0.969 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
23. FBXL7 ENSGALG00000031947 2480 0.968 - - - - - - - 0.968 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
24. ATP6V0E2 ENSGALG00000020754 2648 0.968 - - - - - - - 0.968 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
25. SIAH2 ENSGALG00000010395 2126 0.968 - - - - - - - 0.968 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
26. CLIC4 ENSGALG00000001262 11497 0.967 - - - - - - - 0.967 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
27. COQ5 ENSGALG00000007185 5614 0.967 - - - - - - - 0.967 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
28. C5H15ORF57 C5H15ORF57 4113 0.966 - - - - - - - 0.966 - -
29. TBC1D19 ENSGALG00000029673 1868 0.966 - - - - - - - 0.966 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
30. GPR155 ENSGALG00000014209 1281 0.966 - - - - - - - 0.966 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
31. xcc-b100_1894L ENSGALG00000007564 462 0.964 - - - - - - - 0.964 - - UPF0061 protein xcc-b100_1894-like
32. ALDH6 ALDH6 771 0.964 - - - - - - - 0.964 - -
33. ENSGALG00000026309 ENSGALG00000026309 360 0.964 - - - - - - - 0.964 - -
34. GMFB ENSGALG00000012208 894 0.964 - - - - - - - 0.964 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
35. NGFR ENSGALG00000035950 13452 0.963 - - - - - - - 0.963 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
36. IBA57 ENSGALG00000005328 4362 0.963 - - - - - - - 0.963 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
37. ECHDC3 ENSGALG00000006690 1299 0.963 - - - - - - - 0.963 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
38. LRRC42 ENSGALG00000010743 384 0.963 - - - - - - - 0.963 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
39. TRAPPC12 ENSGALG00000016387 2593 0.963 - - - - - - - 0.963 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
40. CAMK2G ENSGALG00000005088 5037 0.963 - - - - - - - 0.963 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
41. VDAC2 ENSGALG00000005002 12592 0.962 - - - - - - - 0.962 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
42. N4BP2L1 ENSGALG00000017072 1371 0.962 - - - - - - - 0.962 - - NEDD4 binding protein 2 like 1, transcript variant X2
43. SENP2 ENSGALG00000031128 1162 0.962 - - - - - - - 0.962 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
44. CDC37L1 ENSGALG00000014448 2283 0.962 - - - - - - - 0.962 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
45. SLC4A3 ENSGALG00000011224 2161 0.962 - - - - - - - 0.962 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
46. C16orf93 C16orf93 3351 0.962 - - - - - - - 0.962 - -
47. WBP4 ENSGALG00000016949 5858 0.962 - - - - - - - 0.962 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
48. KIF3B ENSGALG00000006604 2968 0.962 - - - - - - - 0.962 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
49. ENSGALG00000016701 ENSGALG00000016701 418 0.961 - - - - - - - 0.961 - -
50. CLEC3B ENSGALG00000030969 363 0.961 - - - - - - - 0.961 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
51. ENSGALG00000021835 ENSGALG00000021835 424 0.961 - - - - - - - 0.961 - -
52. CHGA ENSGALG00000010820 1028 0.961 - - - - - - - 0.961 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
53. CCDC75 CCDC75 4865 0.961 - - - - - - - 0.961 - -
54. PRKAG2 ENSGALG00000006219 504 0.961 - - - - - - - 0.961 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
55. SUPT4H1 ENSGALG00000000944 8675 0.96 - - - - - - - 0.960 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
56. FAM160B1 ENSGALG00000031404 3153 0.96 - - - - - - - 0.960 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
57. ST14 ENSGALG00000001331 1655 0.96 - - - - - - - 0.960 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
58. BIN1 ENSGALG00000011541 2273 0.96 - - - - - - - 0.960 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
59. GTSE1 ENSGALG00000004897 2865 0.96 - - - - - - - 0.960 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
60. ZC3H11A ENSGALG00000000541 2712 0.96 - - - - - - - 0.960 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
61. ZNF148 ENSGALG00000012049 365 0.96 - - - - - - - 0.960 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
62. gga-mir-6681 ENSGALG00000027840 546 0.959 - - - - - - - 0.959 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
63. THAP4 ENSGALG00000006283 1707 0.959 - - - - - - - 0.959 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
64. FRYL ENSGALG00000014103 314 0.959 - - - - - - - 0.959 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
65. AGO1 ENSGALG00000002249 125 0.959 - - - - - - - 0.959 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
66. MED14 ENSGALG00000016238 4685 0.959 - - - - - - - 0.959 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
67. ENSGALG00000025773 ENSGALG00000025773 977 0.959 - - - - - - - 0.959 - -
68. C7H2ORF76 ENSGALG00000012113 1947 0.959 - - - - - - - 0.959 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
69. RFX3 ENSGALG00000010179 305 0.959 - - - - - - - 0.959 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
70. GHR_1 ENSGALG00000014855 198 0.957 - - - - - - - 0.957 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
71. TADA1L TADA1L 6659 0.957 - - - - - - - 0.957 - -
72. IDS ENSGALG00000009154 1177 0.957 - - - - - - - 0.957 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
73. TTC17 ENSGALG00000039558 3301 0.955 - - - - - - - 0.955 - - tetratricopeptide repeat domain 17
74. AP1G1 12403 0.955 - - - - - - - 0.955 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
75. CYB5R3 ENSGALG00000014122 7664 0.955 - - - - - - - 0.955 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
76. SZT2 ENSGALG00000028561 255 0.954 - - - - - - - 0.954 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
77. MMP17 3885 0.954 - - - - - - - 0.954 - - matrix metallopeptidase 17
78. MOB2 ENSGALG00000030499 3658 0.954 - - - - - - - 0.954 - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
79. BRF1 ENSGALG00000011705 3406 0.954 - - - - - - - 0.954 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
80. PAXBP1 ENSGALG00000036833 5573 0.954 - - - - - - - 0.954 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
81. YY1 ENSGALG00000017388 1933 0.953 - - - - - - - 0.953 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
82. ABTB1 ENSGALG00000005999 2446 0.95 - - - - - - - 0.950 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
83. NKRF ENSGALG00000008645 3531 0.949 - - - - - - - 0.949 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
84. SCARF1 2103 0.948 - - - - - - - 0.948 - - scavenger receptor class F member 1, transcript variant X2
85. SLC35F6 ENSGALG00000016589 5172 0.945 - - - - - - - 0.945 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
86. POLDIP3 ENSGALG00000011863 6424 0.942 - - - - - - - 0.942 - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
87. DIABLO ENSGALG00000004412 9499 0.942 - - - - - - - 0.942 - - diablo IAP-binding mitochondrial protein, transcript variant X3
88. SMN ENSGALG00000002430 7515 0.938 - - - - - - - 0.938 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
89. UBA3 ENSGALG00000013410 6923 0.935 - - - - - - - 0.935 - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
90. TLCD1 ENSGALG00000003973 17569 0.925 - - - - - - - 0.925 - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
91. HABP4 ENSGALG00000012628 2894 0.924 - - - - - - - 0.924 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
92. NCDN ENSGALG00000002408 6180 0.916 - - - - - - - 0.916 - - neurochondrin [Source:NCBI gene;Acc:419633]
93. COQ9 ENSGALG00000001184 10174 0.912 - - - - - - - 0.912 - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
94. TMEM55A 2902 0.911 - - - - - - - 0.911 - - transmembrane protein 55A
95. HSD17B12 ENSGALG00000036787 11748 0.898 - - - - - - - 0.898 - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
96. MRTO4 ENSGALG00000003991 13642 0.897 - - - - - - - 0.897 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
97. ARMC1 ENSGALG00000036567 5476 0.895 - - - - - - - 0.895 - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
98. NCBP1 ENSGALG00000002087 8907 0.894 - - - - - - - 0.894 - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
99. MPDZ ENSGALG00000005846 3179 0.89 - - - - - - - 0.890 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
100. DPM2 ENSGALG00000005066 9121 0.887 - - - - - - - 0.887 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA