Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3B

Gene Name Gene ID Reads Annotation
SEMA3B ENSGALG00000013722 7 semaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]











Genes with expression patterns similar to SEMA3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3B ENSGALG00000013722 7 3 - - 1.000 - - 1.000 - - - 1.000 semaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]
2. APLNR ENSGALG00000004841 176 1 - - - - - 1.000 - - - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
3. H6PD ENSGALG00000002492 3 0.93 - - 0.930 - - - - - - - hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
4. AGMO ENSGALG00000010792 76 0.93 - - 0.930 - - - - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
5. SGCZ ENSGALG00000013684 2 0.93 - - 0.930 - - - - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
6. LNX2 LNX2 4 0.93 - - 0.930 - - - - - - -
7. TOR1BL ENSGALG00000023709 1 0.93 - - 0.930 - - - - - - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
8. SEC14L3 ENSGALG00000007840 2 0.93 - - 0.930 - - - - - - - SEC14 like lipid binding 3, transcript variant X2
9. ENSGALG00000027112 ENSGALG00000027112 0 0.93 - - 0.930 - - - - - - -
10. ECE2 ENSGALG00000006272 1 0.93 - - 0.930 - - - - - - - endothelin converting enzyme 2, transcript variant X6
11. C14orf159 C14orf159 7 0.93 - - 0.930 - - - - - - -
12. F13B ENSGALG00000002369 1 0.93 - - 0.930 - - - - - - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
13. ENSGALG00000010456 ENSGALG00000010456 4 0.93 - - 0.930 - - - - - - -
14. PACSIN1 ENSGALG00000002802 6 0.93 - - 0.930 - - - - - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
15. TMOD2 ENSGALG00000004740 6 0.93 - - 0.930 - - - - - - - tropomodulin 2 [Source:HGNC Symbol;Acc:HGNC:11872]
16. ENSGALG00000024018 ENSGALG00000024018 37 0.93 - - 0.930 - - - - - - -
17. RPH3A ENSGALG00000004840 0 0.93 - - 0.930 - - - - - - - rabphilin 3A [Source:HGNC Symbol;Acc:HGNC:17056]
18. GRIN2B 0 0.93 - - 0.930 - - - - - - - glutamate ionotropic receptor NMDA type subunit 2B
19. NR5A1 ENSGALG00000001080 141 0.93 - - 0.930 - - - - - - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
20. NT5DC3 ENSGALG00000029746 1 0.93 - - 0.930 - - - - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
21. TLDC2 ENSGALG00000029033 6 0.93 - - 0.930 - - - - - - - TBC/LysM-associated domain containing 2, transcript variant X2
22. CCDC157 ENSGALG00000007907 10 0.93 - - 0.930 - - - - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
23. MGAT5B ENSGALG00000001740 2 0.93 - - 0.930 - - - - - - - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:24140]
24. MAML3 ENSGALG00000009809 2 0.93 - - 0.930 - - - - - - - mastermind like transcriptional coactivator 3 [Source:HGNC Symbol;Acc:HGNC:16272]
25. SH2B3 ENSGALG00000004610 2 0.93 - - 0.930 - - - - - - - SH2B adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:29605]
26. RASSF6 ENSGALG00000011664 7 0.93 - - 0.930 - - - - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
27. LRP2BP ENSGALG00000045063 2 0.93 - - 0.930 - - - - - - - LRP2 binding protein [Source:HGNC Symbol;Acc:HGNC:25434]
28. ZP3 ENSGALG00000001559 48 0.93 - - 0.930 - - - - - - - zona pellucida sperm-binding protein 3 [Source:NCBI gene;Acc:378906]
29. MCM8 ENSGALG00000009195 9 0.93 - - 0.930 - - - - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:NCBI gene;Acc:421314]
30. SYT6 ENSGALG00000001968 1 0.93 - - 0.930 - - - - - - - synaptotagmin 6 [Source:HGNC Symbol;Acc:HGNC:18638]
31. RAD54L2 ENSGALG00000003243 187 0.925 - - - - - 0.925 - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
32. TMEM117 ENSGALG00000009596 48 0.908 - - - - - 0.908 - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
33. GK5 ENSGALG00000002729 284 0.905 - - - - - 0.905 - - - - glycerol kinase 5 (putative) [Source:NCBI gene;Acc:424779]
34. TOR4A ENSGALG00000008623 1364 0.905 - - - - - 0.905 - - - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
35. SERPINA12 SERPINA12 3 0.904 - - - - - 0.904 - - - -
36. CYP2H1 CYP2H1 363 0.904 - - - - - 0.904 - - - -
37. HINFP ENSGALG00000006806 15 0.904 - - - - - 0.904 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
38. ANGPTL3 ENSGALG00000010978 335 0.904 - - - - - 0.904 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
39. ENSGALG00000028413 ENSGALG00000028413 551 0.904 - - - - - 0.904 - - - -
40. GPR88 ENSGALG00000005252 4 0.904 - - - - - 0.904 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
41. GLOD5 ENSGALG00000025991 17 0.904 - - - - - 0.904 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
42. HMGCS2 ENSGALG00000002960 54 0.902 - - - - - 0.902 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
43. RMDN2 ENSGALG00000010554 16 0.898 - - - - - - - - - 0.898 regulator of microtubule dynamics 2, transcript variant X1
44. PALM2 ENSGALG00000015655 20 0.898 - - - - - 0.898 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
45. GALNT3 ENSGALG00000010960 88 0.892 - - - - - 0.892 - - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
46. P2RY1 ENSGALG00000010357 11 0.892 - - - - - 0.892 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
47. CRYBA2 ENSGALG00000011354 14 0.885 - - - - - 0.885 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
48. TTLL7 ENSGALG00000008850 49 0.884 - - - - - 0.884 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
49. GUCY1B3 29 0.881 - - - - - 0.881 - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
50. RPL3L ENSGALG00000005458 9 0.881 - - - - - 0.881 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
51. ARHGAP39 ENSGALG00000001536 15 0.881 - - - - - 0.881 - - - - Rho GTPase activating protein 39, transcript variant X2
52. UBE3C ENSGALG00000006461 57 0.879 - - - - - 0.879 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
53. gga-mir-6703 ENSGALG00000029026 124 0.879 - - - - - 0.879 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
54. CPA6 ENSGALG00000041918 54 0.878 - - - - - 0.878 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
55. CIP1 CIP1 44 0.876 - - - - - 0.876 - - - -
56. ABLIM1 ENSGALG00000009048 19 0.875 - - - - - 0.875 - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
57. ADCY2 ENSGALG00000013060 164 0.872 - - - - - 0.872 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
58. HOXD10 ENSGALG00000009270 66 0.869 - - - - - 0.869 - - - - homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
59. PCID2 ENSGALG00000016831 57 0.867 - - - - - 0.867 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
60. SNORD35 SNORD35 366 0.862 - - - - - 0.862 - - - -
61. ENSGALG00000027352 ENSGALG00000027352 69 0.86 - - - - - 0.860 - - - -
62. ENSGALG00000026592 ENSGALG00000026592 4331 0.856 - - - - - 0.856 - - - -
63. ENSGALG00000028769 ENSGALG00000028769 11 0.855 - - - - - 0.855 - - - -
64. CCNJ ENSGALG00000006955 47 0.85 - - - - - 0.850 - - - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
65. FRRS1 ENSGALG00000005418 332 0.848 - - - - - 0.848 - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
66. SMAD7A SMAD7A 78 0.846 - - - - - 0.846 - - - -
67. SERPIND1 ENSGALG00000039239 22 0.843 - - - - - 0.843 - - - - serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838]
68. CLDN1 ENSGALG00000026862 28 0.841 - - - - - 0.841 - - - - claudin 1 [Source:NCBI gene;Acc:424910]
69. INPP4A ENSGALG00000029709 48 0.841 - - - - - 0.841 - - - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
70. ENSGALG00000016136 ENSGALG00000016136 33 0.84 - - - - - 0.840 - - - -
71. PBX1A PBX1A 96 0.836 - - - - - 0.836 - - - -
72. TEC ENSGALG00000014124 70 0.836 - - - - - 0.836 - - - - tec protein tyrosine kinase [Source:NCBI gene;Acc:396407]
73. ANKRD33B ENSGALG00000038328 22 0.835 - - - - - 0.835 - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
74. FANCA ENSGALG00000000516 250 0.832 - - - - - 0.832 - - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
75. PRPF19 ENSGALG00000040048 168 0.827 - - - - - 0.827 - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
76. ENSGALG00000026930 ENSGALG00000026930 681 0.826 - - - - - 0.826 - - - -
77. BPIFB8 BPIFB8 49 0.825 - - 0.825 - - - - - - -
78. ENSGALG00000006716 ENSGALG00000006716 280 0.825 - - - - - 0.825 - - - -
79. KIRREL3 ENSGALG00000029197 5 0.823 - - 0.823 - - - - - - - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
80. BCOR ENSGALG00000016245 85 0.823 - - - - - 0.823 - - - - BCL6 corepressor, transcript variant X8
81. LOC415661 ENSGALG00000021451 15 0.823 - - 0.823 - - - - - - - uncharacterized oxidoreductase-like
82. GLS ENSGALG00000030419 440 0.822 - - - - - 0.822 - - - - glutaminase [Source:NCBI gene;Acc:424043]
83. ASB1 ENSGALG00000004272 38 0.821 - - - - - 0.821 - - - - ankyrin repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:16011]
84. SH2D4A ENSGALG00000010122 206 0.816 - - - - - 0.816 - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
85. NRBP2 ENSGALG00000029760 1902 0.815 - - - - - 0.815 - - - - nuclear receptor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19339]
86. C17orf62 C17orf62 37 0.815 - - - - - 0.815 - - - -
87. COPS8 ENSGALG00000033385 10166 0.813 - - - - - 0.813 - - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
88. GPC5 ENSGALG00000016902 47 0.813 - - - - - 0.813 - - - - glypican 5 [Source:HGNC Symbol;Acc:HGNC:4453]
89. NCEH1 ENSGALG00000009170 8 0.811 - - - - - - - - - 0.811 neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
90. C11orf49 ENSGALG00000008255 36 0.809 - - - - - - - - - 0.809 chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
91. C15orf60 C15orf60 16 0.809 - - - - - - - - - 0.809
92. BTN1A1 ENSGALG00000000589 20 0.809 - - - - - - - - - 0.809 butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
93. FAM151B ENSGALG00000015577 11 0.809 - - - - - - - - - 0.809 family with sequence similarity 151 member B
94. CTSD ENSGALG00000006613 4 0.809 - - - - - - - - - 0.809 cathepsin D [Source:NCBI gene;Acc:396090]
95. TMEM8B ENSGALG00000002386 32 0.807 - - - - - 0.807 - - - - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
96. GPR137B ENSGALG00000010843 69 0.805 - - - - - 0.805 - - - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
97. TMEM200B ENSGALG00000024318 117 0.803 - - - - - 0.803 - - - - transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
98. C11orf74 C11orf74 260 0.799 - - - - - 0.799 - - - -
99. ARMC6 ENSGALG00000003024 3052 0.798 - - - - - 0.798 - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
100. FANCB ENSGALG00000016569 1193 0.797 - - - - - 0.797 - - - - FA complementation group B [Source:NCBI gene;Acc:418628]

There are 65 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA