Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEMA3A

Gene Name Gene ID Reads Annotation
SEMA3A ENSGALG00000006560 170 semaphorin 3A [Source:NCBI gene;Acc:395825]











Genes with expression patterns similar to SEMA3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEMA3A ENSGALG00000006560 170 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 semaphorin 3A [Source:NCBI gene;Acc:395825]
2. LHFPL2 ENSGALG00000004437 500 1.627 - - 0.830 - - 0.797 - - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
3. CDK5RAP3 ENSGALG00000036452 693 1.577 - - 0.739 - - - - 0.838 - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
4. RGS18 ENSGALG00000021143 120 1.513 - - 0.781 - - 0.732 - - - - regulator of G-protein signaling 18 [Source:NCBI gene;Acc:424361]
5. SDR42E2 ENSGALG00000006964 57 0.89 - - 0.890 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
6. MYRF ENSGALG00000041253 13 0.883 - - 0.883 - - - - - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
7. SLC38A7 ENSGALG00000002313 25 0.88 - - 0.880 - - - - - - - solute carrier family 38 member 7, transcript variant X5
8. SLC30A9 ENSGALG00000031415 36 0.876 - - 0.876 - - - - - - - solute carrier family 30 member 9
9. DGKB ENSGALG00000033561 170 0.871 - - - - - - - 0.871 - - diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
10. EX-FABP EX-FABP 516 0.865 - - 0.865 - - - - - - -
11. CFD ENSGALG00000040832 222 0.859 - - 0.859 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
12. ENSGALG00000027162 ENSGALG00000027162 8 0.851 - - 0.851 - - - - - - -
13. SPINK4 ENSGALG00000043964 50 0.85 - - 0.850 - - - - - - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
14. SLC2A1 ENSGALG00000004889 10 0.85 - - 0.850 - - - - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
15. SPOCK3 ENSGALG00000009568 33 0.849 - - 0.849 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
16. ENSGALG00000003796 ENSGALG00000003796 7 0.847 - - 0.847 - - - - - - -
17. EFHC1 ENSGALG00000016674 14 0.847 - - 0.847 - - - - - - - EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]
18. TRAIL-LIKE ENSGALG00000007240 8 0.847 - - 0.847 - - - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
19. ENSGALG00000012518 ENSGALG00000012518 25 0.847 - - 0.847 - - - - - - -
20. TMIE 6 0.847 - - 0.847 - - - - - - - transmembrane inner ear
21. JMJD4 ENSGALG00000005417 10 0.847 - - 0.847 - - - - - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
22. INPP5J ENSGALG00000023266 6 0.847 - - 0.847 - - - - - - - inositol polyphosphate-5-phosphatase J [Source:HGNC Symbol;Acc:HGNC:8956]
23. TLR5 ENSGALG00000009392 28 0.847 - - 0.847 - - - - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
24. OR11A1 ENSGALG00000041229 9 0.847 - - 0.847 - - - - - - - olfactory receptor family 11 subfamily A member 1
25. ENSGALG00000007855 ENSGALG00000007855 7 0.847 - - 0.847 - - - - - - -
26. TAF5L ENSGALG00000011098 17 0.847 - - 0.847 - - - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
27. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 0.845 - - 0.845 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
28. MMP13 ENSGALG00000017183 7 0.843 - - 0.843 - - - - - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
29. C10ORF57 C10ORF57 249 0.842 - - 0.842 - - - - - - -
30. COL21A1 ENSGALG00000016292 35 0.84 - - 0.840 - - - - - - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
31. MBLAC2 ENSGALG00000014649 16 0.839 - - 0.839 - - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
32. ARHGDIG ENSGALG00000036819 18 0.838 - - 0.838 - - - - - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
33. KCNC1 ENSGALG00000006220 15 0.838 - - 0.838 - - - - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
34. RAP2A ENSGALG00000016889 26 0.838 - - 0.838 - - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
35. ZNF385C ENSGALG00000003403 9 0.837 - - 0.837 - - - - - - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
36. TMCO4 ENSGALG00000004081 31 0.834 - - 0.834 - - - - - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
37. MFSD8 ENSGALG00000010199 11 0.832 - - 0.832 - - - - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
38. HOXA1 ENSGALG00000028095 137 0.831 - - 0.831 - - - - - - - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
39. BAAT ENSGALG00000040619 579 0.831 - - 0.831 - - - - - - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
40. ATP11A ENSGALG00000041644 74 0.831 - - 0.831 - - - - - - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
41. PLEKHF1 ENSGALG00000004474 8 0.83 - - 0.830 - - - - - - - pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
42. KCNQ1 ENSGALG00000037138 179 0.826 - - 0.826 - - - - - - - potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
43. LRP6 ENSGALG00000031503 39 0.826 - - 0.826 - - - - - - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
44. STAB1 21 0.825 - - 0.825 - - - - - - - stabilin 1, transcript variant X2
45. ARHGAP10 ENSGALG00000010031 31 0.824 - - 0.824 - - - - - - - Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:HGNC:26099]
46. AIM1 51 0.824 - - 0.824 - - - - - - - absent in melanoma 1, transcript variant X2
47. PPL ENSGALG00000002201 13 0.823 - - 0.823 - - - - - - - periplakin
48. FANCA ENSGALG00000000516 250 0.823 - - 0.823 - - - - - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
49. IGSF6 ENSGALG00000007059 25 0.821 - - 0.821 - - - - - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
50. ENSGALG00000020349 ENSGALG00000020349 10 0.819 - - 0.819 - - - - - - -
51. ENSGALG00000005498 ENSGALG00000005498 11 0.819 - - 0.819 - - - - - - -
52. NMRK2 ENSGALG00000025751 57 0.819 - - 0.819 - - - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
53. DGKH ENSGALG00000016959 75 0.817 - - 0.817 - - - - - - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
54. PPP2R5E ENSGALG00000011840 176 0.817 - - 0.817 - - - - - - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
55. WDR37 ENSGALG00000006749 44 0.816 - - 0.816 - - - - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
56. APPL1 ENSGALG00000005527 104 0.814 - - 0.814 - - - - - - - adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 [Source:HGNC Symbol;Acc:HGNC:24035]
57. ENSGALG00000008594 ENSGALG00000008594 54 0.813 - - 0.813 - - - - - - -
58. HECW1 ENSGALG00000037193 24 0.811 - - 0.811 - - - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
59. ALS2CL ENSGALG00000005430 161 0.809 - - 0.809 - - - - - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
60. ST6GAL2 ENSGALG00000016803 24 0.807 - - 0.807 - - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
61. HGF/SF HGF/SF 345 0.806 - - 0.806 - - - - - - -
62. DRD2 ENSGALG00000007794 399 0.805 - - 0.805 - - - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
63. IQSEC1 ENSGALG00000005042 24 0.805 - - 0.805 - - - - - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
64. SETD8 SETD8 392 0.804 - - - - - - 0.804 - - -
65. UROS ENSGALG00000013688 10 0.803 - - 0.803 - - - - - - - uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
66. ANAPC1 ENSGALG00000008254 2519 0.802 - - 0.802 - - - - - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
67. KIAA1217 ENSGALG00000007766 144 0.801 - - 0.801 - - - - - - - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
68. RHO ENSGALG00000020745 56 0.8 - - - - - 0.800 - - - - rhodopsin [Source:NCBI gene;Acc:751791]
69. NFAT5 ENSGALG00000039300 29 0.799 - - 0.799 - - - - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
70. CNR1 ENSGALG00000037511 38 0.799 - - 0.799 - - - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
71. KDSR ENSGALG00000012882 57 0.799 - - 0.799 - - - - - - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
72. GGH ENSGALG00000031130 40 0.798 - - 0.798 - - - - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
73. BDKRB2 ENSGALG00000011080 12 0.798 - - - - - 0.798 - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
74. FOXRED2 ENSGALG00000012530 36 0.798 - - 0.798 - - - - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
75. RAX1 RAX1 44 0.798 - - 0.798 - - - - - - -
76. ENSGALG00000022857 ENSGALG00000022857 4 0.797 - - - - - 0.797 - - - -
77. MKNK1 ENSGALG00000010440 196 0.794 - - 0.794 - - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
78. PANX2 ENSGALG00000000003 2185 0.792 - - 0.792 - - - - - - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
79. RASL11AL ENSGALG00000007710 88 0.79 - - 0.790 - - - - - - - ras-like protein family member 11A-like
80. EPHX1 ENSGALG00000009291 46 0.79 - - 0.790 - - - - - - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
81. FAM96A ENSGALG00000026448 41 0.788 - - 0.788 - - - - - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
82. ARID3C ENSGALG00000005839 646 0.788 - - 0.788 - - - - - - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
83. ST6GALNAC1 ENSGALG00000001862 133 0.788 - - 0.788 - - - - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
84. FAM190B FAM190B 165 0.788 - - 0.788 - - - - - - -
85. ZNF438 ENSGALG00000007266 26 0.785 - - 0.785 - - - - - - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
86. HHLA2 ENSGALG00000022871 19 0.785 - - - - - 0.785 - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
87. TSSC1 42 0.783 - - - - - - - 0.783 - - tumor suppressing subtransferable candidate 1, transcript variant X1
88. ZNF410 ENSGALG00000010193 28 0.781 - - 0.781 - - - - - - - zinc finger protein 410 [Source:NCBI gene;Acc:423340]
89. GALNT2 ENSGALG00000011106 167 0.78 - - 0.780 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
90. MTMR14 ENSGALG00000006601 1435 0.78 - - - - 0.780 - - - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
91. STYXL1 ENSGALG00000001963 327 0.778 - - 0.778 - - - - - - - serine/threonine/tyrosine interacting like 1
92. SNORA21 SNORA21 396 0.776 - - - - - - - 0.776 - -
93. SLP76 SLP76 84 0.776 - - 0.776 - - - - - - -
94. CHRNG ENSGALG00000007906 19 0.776 - - 0.776 - - - - - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
95. NARS2 ENSGALG00000017262 12 0.773 - - 0.773 - - - - - - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26274]
96. TNS3 ENSGALG00000039139 63 0.77 - - 0.770 - - - - - - - tensin 3 [Source:NCBI gene;Acc:420792]
97. ISOC1 ENSGALG00000000161 46 0.768 - - 0.768 - - - - - - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
98. CCND2 ENSGALG00000017283 38 0.768 - - 0.768 - - - - - - - cyclin D2 [Source:NCBI gene;Acc:374047]
99. EFCAB11 ENSGALG00000020402 16 0.768 - - 0.768 - - - - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
100. GNPTG ENSGALG00000006441 50 0.766 - - 0.766 - - - - - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]

There are 80 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA