Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SELM

Gene Name Gene ID Reads Annotation
SELM SELM 6366











Genes with expression patterns similar to SELM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SELM SELM 6366 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. TUBA4A ENSGALG00000000433 1367 1.769 - - 0.941 - - - 0.828 - - - tubulin alpha 4a
3. SQLE ENSGALG00000036915 4172 1.746 - - 0.894 - - - 0.852 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
4. SPG11 ENSGALG00000008180 1890 1.729 - - 0.841 - - - 0.888 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
5. CSTF3 ENSGALG00000011685 4711 1.721 - - 0.874 - - - 0.847 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
6. URM1 ENSGALG00000004971 17880 1.705 - - 0.865 - - - 0.840 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
7. DNAJC16 ENSGALG00000032832 750 1.692 - - - - - - 0.875 - - 0.817 DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
8. WDR92 ENSGALG00000008760 3934 1.672 - - 0.927 - - - 0.745 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
9. RAB3IP ENSGALG00000009959 1652 1.669 - - 0.908 - - - 0.761 - - - RAB3A interacting protein, transcript variant X1
10. PLCE1 ENSGALG00000039528 151 1.642 - - - - - - 0.847 - - 0.795 phospholipase C epsilon 1
11. SEC22B ENSGALG00000039704 16080 1.633 - - 0.882 - - - 0.751 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
12. SHROOM2 ENSGALG00000030802 4517 1.633 - - 0.800 - - - 0.833 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
13. RNF20 ENSGALG00000015548 7199 1.617 - - 0.763 - - - 0.854 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
14. NUBP1 ENSGALG00000007241 3791 1.612 - - 0.893 - - - - 0.719 - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
15. MBNL1 ENSGALG00000029190 3953 1.587 - - 0.764 - - - 0.823 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
16. PRPF40A ENSGALG00000012526 7724 1.564 - - 0.818 - - - 0.746 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
17. SPCS2 ENSGALG00000019036 9496 1.473 - - 0.710 - - - 0.763 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
18. TCTN2 ENSGALG00000023683 3596 0.941 - - 0.941 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
19. RECQL ENSGALG00000013174 1323 0.94 - - 0.940 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
20. TMEM242 ENSGALG00000013689 377 0.939 - - 0.939 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
21. BBS5 ENSGALG00000009846 344 0.938 - - 0.938 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
22. L3MBTL3 ENSGALG00000034030 113 0.938 - - 0.938 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
23. RFK ENSGALG00000033558 1364 0.937 - - 0.937 - - - - - - - riboflavin kinase, transcript variant X3
24. ENSGALG00000028964 ENSGALG00000028964 46 0.937 - - 0.937 - - - - - - -
25. PTDSS2 ENSGALG00000004300 682 0.937 - - 0.937 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
26. F2R ENSGALG00000014983 106 0.937 - - 0.937 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
27. MRC2 ENSGALG00000000461 48 0.937 - - 0.937 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
28. DBN1 ENSGALG00000033405 216 0.937 - - 0.937 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
29. LRRC42 ENSGALG00000010743 384 0.937 - - 0.937 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
30. ITGB4 ENSGALG00000002389 44 0.937 - - 0.937 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
31. UEVLD ENSGALG00000006342 164 0.937 - - 0.937 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
32. TDRD6 48 0.937 - - 0.937 - - - - - - - tudor domain containing 6
33. ENSGALG00000002020 ENSGALG00000002020 183 0.937 - - 0.937 - - - - - - -
34. U4 U4 69 0.936 - - 0.936 - - - - - - -
35. GDPD4 ENSGALG00000000690 824 0.936 - - 0.936 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
36. ENSGALG00000020103 ENSGALG00000020103 64 0.936 - - 0.936 - - - - - - -
37. NXPE3 ENSGALG00000015344 111 0.936 - - 0.936 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
38. WAPAL WAPAL 625 0.936 - - 0.936 - - - - - - -
39. CDC14B ENSGALG00000012627 110 0.936 - - 0.936 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
40. AKAP10 ENSGALG00000004679 103 0.936 - - 0.936 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
41. CEP104 ENSGALG00000000978 1130 0.936 - - 0.936 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
42. MED12 ENSGALG00000036322 814 0.936 - - 0.936 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
43. SLC3A1 ENSGALG00000009973 608 0.936 - - 0.936 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
44. RQCD1 RQCD1 110 0.936 - - 0.936 - - - - - - -
45. SZT2 ENSGALG00000028561 255 0.936 - - 0.936 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
46. FBXL5 ENSGALG00000014510 245 0.935 - - 0.935 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
47. ITM2B ENSGALG00000016996 1112 0.935 - - 0.935 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
48. TRIM13 ENSGALG00000017011 92 0.935 - - 0.935 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
49. RPS6KB1 ENSGALG00000005198 169 0.934 - - 0.934 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
50. CLEC16A ENSGALG00000007167 66 0.934 - - 0.934 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
51. TTPAL ENSGALG00000004244 2734 0.934 - - 0.934 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
52. SLC37A3 ENSGALG00000012849 836 0.934 - - 0.934 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
53. ENSGALG00000004703 ENSGALG00000004703 112 0.934 - - 0.934 - - - - - - -
54. LRRC71 ENSGALG00000027351 695 0.933 - - 0.933 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
55. ABCC3 ENSGALG00000007522 340 0.933 - - 0.933 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
56. GTF2H2 ENSGALG00000002399 2361 0.933 - - 0.933 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
57. BBX ENSGALG00000015353 1281 0.933 - - 0.933 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
58. OSGIN2 ENSGALG00000042840 83 0.932 - - 0.932 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
59. CDC42SE2 ENSGALG00000027258 4725 0.932 - - - - - - 0.932 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
60. ABCE1 ENSGALG00000009961 958 0.931 - - 0.931 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
61. CA9 ENSGALG00000021340 1431 0.931 - - 0.931 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
62. RALGAPA2 240 0.931 - - 0.931 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
63. FAM134C 860 0.931 - - 0.931 - - - - - - - family with sequence similarity 134 member C
64. BAG5 ENSGALG00000031062 4498 0.93 - - 0.930 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
65. RAD54L2 ENSGALG00000003243 187 0.929 - - 0.929 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
66. MRPS33 ENSGALG00000028879 17966 0.929 - - 0.929 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
67. NACAD 679 0.929 - - 0.929 - - - - - - - NAC alpha domain containing, transcript variant X1
68. SNX14 ENSGALG00000015831 2554 0.929 - - 0.929 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
69. KCTD3 ENSGALG00000009678 335 0.929 - - 0.929 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
70. TUBGCP3 ENSGALG00000016836 332 0.928 - - 0.928 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
71. PCYT1B 190 0.928 - - 0.928 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
72. CHAMP1 ENSGALG00000016813 508 0.928 - - 0.928 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
73. ATP8B4 ENSGALG00000002326 456 0.928 - - 0.928 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
74. WIPI1 ENSGALG00000004215 3359 0.927 - - - - - - 0.927 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
75. PCDH17 ENSGALG00000016941 1006 0.927 - - 0.927 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
76. RAD1 ENSGALG00000003365 1417 0.927 - - 0.927 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
77. PRUNE PRUNE 452 0.927 - - 0.927 - - - - - - -
78. ENSGALG00000008689 ENSGALG00000008689 232 0.926 - - 0.926 - - - - - - -
79. KDM6A ENSGALG00000016217 2302 0.926 - - 0.926 - - - - - - - lysine demethylase 6A, transcript variant X14
80. SMARCAD1 ENSGALG00000037339 149 0.926 - - 0.926 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
81. SEPHS1 ENSGALG00000014575 10701 0.925 - - 0.925 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
82. STXBP6 ENSGALG00000009847 224 0.925 - - 0.925 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
83. MIB1 ENSGALG00000014974 3583 0.924 - - 0.924 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
84. YBX3 ENSGALG00000031890 819 0.924 - - 0.924 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
85. ATF7IP ENSGALG00000011814 1571 0.924 - - 0.924 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
86. NDUFB1 ENSGALG00000028537 2059 0.924 - - 0.924 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
87. CHGA ENSGALG00000010820 1028 0.924 - - 0.924 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
88. ADK ENSGALG00000005057 199 0.923 - - 0.923 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
89. TAF1B ENSGALG00000016437 2318 0.923 - - 0.923 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
90. WHSC1 1712 0.921 - - 0.921 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
91. MAPRE3 ENSGALG00000031726 191 0.921 - - 0.921 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
92. IFT81 ENSGALG00000003854 2534 0.921 - - 0.921 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
93. GFER ENSGALG00000005579 1367 0.921 - - 0.921 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
94. MLLT3 ENSGALG00000015078 502 0.921 - - 0.921 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
95. FAM57A ENSGALG00000004820 1492 0.92 - - - - - - 0.920 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
96. TLE1 ENSGALG00000012575 2047 0.919 - - 0.919 - - - - - - - transducin like enhancer of split 1 [Source:HGNC Symbol;Acc:HGNC:11837]
97. AKTIP ENSGALG00000033378 1991 0.919 - - 0.919 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
98. AASDHPPT ENSGALG00000027981 1017 0.918 - - 0.918 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
99. HOXB5 ENSGALG00000034907 3646 0.918 - - 0.918 - - - - - - - homeobox B5 [Source:NCBI gene;Acc:425096]
100. NGF ENSGALG00000002556 122 0.917 - - 0.917 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]

There are 777 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA