Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SEC13

Gene Name Gene ID Reads Annotation
SEC13 ENSGALG00000008419 18388 SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]











Genes with expression patterns similar to SEC13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SEC13 ENSGALG00000008419 18388 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
2. GMPS ENSGALG00000010284 8765 0.999 - - - - - - 0.999 - - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
3. TAF13 ENSGALG00000015185 11410 0.999 - - - - - - 0.999 - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
4. CDH5 ENSGALG00000032349 8526 0.999 - - - - - - 0.999 - - - cadherin 5 [Source:NCBI gene;Acc:374068]
5. DOHH ENSGALG00000017524 9420 0.999 - - - - - - 0.999 - - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
6. WRN ENSGALG00000040909 3645 0.999 - - - - - - 0.999 - - - Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
7. HDHD2 ENSGALG00000034801 6373 0.999 - - - - - - 0.999 - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
8. CDCA3 ENSGALG00000014513 17047 0.999 - - - - - - 0.999 - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
9. CENPL ENSGALG00000038411 4867 0.999 - - - - - - 0.999 - - - centromere protein L [Source:NCBI gene;Acc:426563]
10. WDR1 ENSGALG00000014957 15700 0.999 - - - - - - 0.999 - - - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
11. NUP214 ENSGALG00000041111 4902 0.999 - - - - - - 0.999 - - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
12. MRPS25 ENSGALG00000008506 12131 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
13. HAUS6 ENSGALG00000015091 9671 0.999 - - - - - - 0.999 - - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
14. MED10 ENSGALG00000028336 9343 0.999 - - - - - - 0.999 - - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
15. CARHSP1 ENSGALG00000042981 6920 0.999 - - - - - - 0.999 - - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
16. FANCE ENSGALG00000002561 3532 0.998 - - - - - - 0.998 - - - Fanconi anemia complementation group E
17. UBP1 ENSGALG00000035630 13359 0.998 - - - - - - 0.998 - - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
18. MKKS ENSGALG00000009013 9301 0.998 - - - - - - 0.998 - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
19. NEIL1 ENSGALG00000001586 2292 0.998 - - - - - - 0.998 - - - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
20. REPS1 ENSGALG00000013829 2271 0.998 - - - - - - 0.998 - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
21. MRPL51 ENSGALG00000014435 29348 0.998 - - - - - - 0.998 - - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
22. TNNI1 ENSGALG00000000313 4069 0.998 - - - - - - 0.998 - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
23. SAMHD1 ENSGALG00000001231 5218 0.998 - - - - - - 0.998 - - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
24. PSMA3 ENSGALG00000012039 26539 0.997 - - - - - - 0.997 - - - proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
25. SDOS SDOS 66125 0.994 - - - - - - 0.994 - - -
26. ARPC3 ENSGALG00000003820 29128 0.994 - - - - - - 0.994 - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
27. GLCCI1 ENSGALG00000035239 22149 0.992 - - - - - - 0.992 - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
28. DDT ENSGALG00000006350 16117 0.99 - - - - - - 0.990 - - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
29. CCT6 CCT6 65150 0.949 - - - - - - 0.949 - - -
30. ZC3H15 ENSGALG00000041857 19808 0.918 - - - - - - - 0.918 - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
31. PCNP ENSGALG00000015330 15750 0.918 - - - - - - - 0.918 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
32. EIF2D ENSGALG00000000856 8348 0.915 - - - - - - - 0.915 - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
33. PLRG1 ENSGALG00000009257 8613 0.908 - - - - - - - 0.908 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
34. THYN1 ENSGALG00000001529 9423 0.907 - - - - - - - 0.907 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
35. FAM120A ENSGALG00000039316 28650 0.904 - - - - - - 0.904 - - - family with sequence similarity 120A, transcript variant X1
36. CLPTM1L ENSGALG00000013187 9733 0.895 - - - - - - - 0.895 - - CLPTM1 like [Source:NCBI gene;Acc:420973]
37. MED23 ENSGALG00000040607 5105 0.89 - - - - - - - 0.890 - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
38. SFSWAP ENSGALG00000002487 9977 0.884 - - - - - - - 0.884 - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
39. ASPM ENSGALG00000032398 12784 0.876 - - - - - - 0.876 - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
40. DHX38 ENSGALG00000000787 6913 0.873 - - - - - - - 0.873 - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
41. ENSGALG00000004773 ENSGALG00000004773 10418 0.872 - - - - - - - 0.872 - -
42. METTL23 ENSGALG00000001790 7906 0.872 - - - - - - - 0.872 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
43. SCCPDH ENSGALG00000010641 8624 0.871 - - - - - - - 0.871 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
44. AP2A2 ENSGALG00000006799 13874 0.87 - - - - - - - 0.870 - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
45. DNAJC15 ENSGALG00000016965 9163 0.868 - - - - - - - 0.868 - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
46. THUMPD3 ENSGALG00000008394 17711 0.868 - - - - - - - 0.868 - - THUMP domain containing 3, transcript variant X2
47. MOSPD1 ENSGALG00000006132 8503 0.862 - - - - - - - 0.862 - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
48. WDR12 ENSGALG00000008470 7654 0.862 - - - - - - - 0.862 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
49. SCML2 ENSGALG00000016537 9348 0.861 - - - - - - - 0.861 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
50. UBE2V1 ENSGALG00000008015 17947 0.86 - - - - - - - 0.860 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
51. IPO7 ENSGALG00000005807 46316 0.856 - - - - - - 0.856 - - - importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
52. RNF166 ENSGALG00000007272 7154 0.854 - - - - - - - 0.854 - - ring finger protein 166 [Source:NCBI gene;Acc:425360]
53. KLHDC4 ENSGALG00000037315 9828 0.854 - - - - - - - 0.854 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
54. NUP153 ENSGALG00000012720 8079 0.852 - - - - - - - 0.852 - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
55. NAP1L4 ENSGALG00000006446 10868 0.851 - - - - - - - 0.851 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
56. HOXA9 ENSGALG00000028983 9298 0.851 - - - - - - - 0.851 - - homeobox A9 [Source:NCBI gene;Acc:396096]
57. UBE2G2 ENSGALG00000005667 12689 0.849 - - - - - - - 0.849 - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
58. CUL4B ENSGALG00000008559 16864 0.847 - - - - - - - 0.847 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
59. CEP78 ENSGALG00000015179 5227 0.841 - - - - - - - 0.841 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
60. SH3GLB1 ENSGALG00000006284 12764 0.835 - - - - - - - 0.835 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
61. ZMYND11 ENSGALG00000006599 5740 0.834 - - - - - - - 0.834 - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
62. MARK3 ENSGALG00000011505 14846 0.833 - - - - - - - 0.833 - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
63. SMU1 ENSGALG00000002014 8136 0.83 - - - - - - - 0.830 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
64. MLX ENSGALG00000003199 5286 0.824 - - - - - - - 0.824 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
65. PDZRN3 ENSGALG00000007819 4139 0.821 - - - - - - - 0.821 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
66. BIRC6 ENSGALG00000010541 7999 0.817 - - - - - - - 0.817 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
67. CTNNBIP1 ENSGALG00000026306 8049 0.816 - - - - - - - 0.816 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
68. WLS ENSGALG00000011238 20969 0.816 - - - - - - - 0.816 - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
69. gga-mir-6683 ENSGALG00000026767 5682 0.816 - - - - - - - 0.816 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]
70. TAF7 4725 0.81 - - - - - - - 0.810 - - TATA-box binding protein associated factor 7, transcript variant X1
71. OAT ENSGALG00000031158 10249 0.801 - - - - - - - 0.801 - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
72. TRAPPC2L ENSGALG00000006250 21772 0.795 - - - - - - - 0.795 - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
73. NAA25 ENSGALG00000041821 12729 0.794 - - - - - - - 0.794 - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
74. TDRD3 ENSGALG00000016936 3412 0.794 - - - - - - - 0.794 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
75. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.794 - - - - - - - 0.794 - -
76. ZBTB16 ENSGALG00000038540 5544 0.793 - - - - - - - 0.793 - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
77. PAXIP1 ENSGALG00000036064 3120 0.792 - - - - - - - 0.792 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
78. THAP5 ENSGALG00000009494 6540 0.79 - - - - - - - 0.790 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
79. RAD50 ENSGALG00000006794 4308 0.787 - - - - - - - 0.787 - - RAD50 double strand break repair protein, transcript variant X4
80. CXXC5 ENSGALG00000000884 16351 0.786 - - - - - - - 0.786 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
81. HIBADH ENSGALG00000033207 3540 0.786 - - - - - - - 0.786 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
82. YOD1 ENSGALG00000037597 2989 0.784 - - - - - - - 0.784 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
83. ZC3H13 ENSGALG00000016984 21043 0.777 - - - - - - - 0.777 - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
84. LRRFIP2 ENSGALG00000033102 8250 0.776 - - - - - - - 0.776 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
85. USP14 ENSGALG00000014920 18778 0.774 - - - - - - - 0.774 - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
86. HEATR6 ENSGALG00000005516 3347 0.772 - - - - - - - 0.772 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
87. PRMT3 ENSGALG00000003958 14160 0.767 - - - - - - - 0.767 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
88. SMPD4 ENSGALG00000006455 2270 0.766 - - - - - - - 0.766 - - sphingomyelin phosphodiesterase 4, transcript variant X1
89. ATRIP ENSGALG00000004670 3647 0.766 - - - - - - - 0.766 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
90. SYAP1 ENSGALG00000016548 3347 0.765 - - - - - - - 0.765 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
91. DNTTIP1 ENSGALG00000003575 4687 0.763 - - - - - - - 0.763 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
92. PRPSAP2 ENSGALG00000005064 5549 0.762 - - - - - - - 0.762 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
93. CAPZA1 ENSGALG00000001547 24242 0.761 - - - - - - 0.761 - - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
94. HSDL2 ENSGALG00000015663 8966 0.759 - - - - - - - 0.759 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
95. C6ORF162 C6ORF162 4217 0.759 - - - - - - - 0.759 - -
96. SNX3 ENSGALG00000015304 1631 0.757 - - - - - - - 0.757 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
97. AK1 ENSGALG00000029150 5935 0.756 - - - - - - - 0.756 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
98. GID8 ENSGALG00000005700 3992 0.755 - - - - - - - 0.755 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
99. CSTF2 ENSGALG00000006760 8820 0.754 - - - - - - - 0.754 - - cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
100. SEC24B ENSGALG00000035482 3430 0.751 - - - - - - - 0.751 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]

There are 45 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA