Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDR42E2

Gene Name Gene ID Reads Annotation
SDR42E2 ENSGALG00000006964 57 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]











Genes with expression patterns similar to SDR42E2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDR42E2 ENSGALG00000006964 57 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
2. ENPP3 ENSGALG00000037587 25 2.761 - - - 0.860 - - - 0.967 - 0.934 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
3. VTG1 ENSGALG00000039354 17 1.832 - - - - - 0.898 - - - 0.934 vitellogenin 1 [Source:NCBI gene;Acc:424547]
4. TMCO4 ENSGALG00000004081 31 1.812 - - 0.814 - - - - 0.998 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
5. STAB1 21 1.801 - - 0.801 - - - - 1.000 - - stabilin 1, transcript variant X2
6. RAP2A ENSGALG00000016889 26 1.756 - - 0.822 - - - - - - 0.934 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
7. SLC38A7 ENSGALG00000002313 25 1.755 - - 0.857 - - 0.898 - - - - solute carrier family 38 member 7, transcript variant X5
8. ADCY8 ENSGALG00000030251 40 1.66 - - - - - 0.899 - - - 0.761 adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
9. PLEKHF1 ENSGALG00000004474 8 1.533 - - 0.811 - - 0.722 - - - - pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
10. GAL ENSGALG00000007047 606 1.507 - - - 0.782 - - - 0.725 - - galanin and GMAP prepropeptide [Source:NCBI gene;Acc:423117]
11. WDR37 ENSGALG00000006749 44 1.504 - - 0.798 0.706 - - - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
12. CCDC96 9 1 - - - - - - - 1.000 - - coiled-coil domain containing 96
13. GINS3 ENSGALG00000031209 32 1 - - - - - - - 1.000 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
14. APOAIV APOAIV 5 1 - - - - - - - 1.000 - -
15. PLB1 PLB1 101 1 - - - - - - - 1.000 - -
16. USP53 ENSGALG00000011990 12 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
17. FOXP4 ENSGALG00000033497 13 1 - - - - - - - 1.000 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
18. ENSGALG00000019053 ENSGALG00000019053 8 1 - - - - - - - 1.000 - -
19. GFAP ENSGALG00000000909 21 1 - - - - - - - 1.000 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
20. ICOS ENSGALG00000008656 27 0.996 - - - - - - - 0.996 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
21. KRT20 ENSGALG00000019716 11 0.996 - - - - - - - 0.996 - - keratin 20 [Source:NCBI gene;Acc:420045]
22. CD4 ENSGALG00000014477 19 0.995 - - - - - - - 0.995 - - CD4 molecule [Source:NCBI gene;Acc:395362]
23. INA ENSGALG00000028238 208 0.994 - - - - - - - 0.994 - - internexin neuronal intermediate filament protein alpha
24. MAPT ENSGALG00000000625 659 0.993 - - - - - - - 0.993 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
25. ANKRD44 ENSGALG00000007996 17 0.991 - - - - - - - 0.991 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
26. DNAI2 ENSGALG00000004495 45 0.991 - - - - - - - 0.991 - - dynein axonemal intermediate chain 2
27. ABCA8 ENSGALG00000021399 11 0.99 - - - - - - - 0.990 - - ATP binding cassette subfamily A member 8
28. KLRD1 ENSGALG00000014722 27 0.988 - - - - - - - 0.988 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
29. ZIC3 ENSGALG00000031144 863 0.986 - - - - - - - 0.986 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
30. RIPK4 ENSGALG00000040189 102 0.983 - - - - - - - 0.983 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
31. AQP12 AQP12 11 0.983 - - - - - - - 0.983 - -
32. HAVCR1 ENSGALG00000017362 25 0.979 - - - - - - - 0.979 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
33. KIAA0513 ENSGALG00000025938 46 0.979 - - - - - - - 0.979 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
34. STYK1 ENSGALG00000014759 3 0.977 - - - - - 0.977 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
35. SNORA74 SNORA74 8 0.977 - - - - - 0.977 - - - -
36. IRG1 IRG1 21 0.976 - - - - - - - 0.976 - -
37. PAK2 ENSGALG00000006426 283 0.973 - - - - - - - 0.973 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
38. NXPH2 ENSGALG00000029083 353 0.972 - - - - - - - 0.972 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
39. EPB41L4A ENSGALG00000000234 113 0.967 - - - - - - - 0.967 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
40. LOC417973 ENSGALG00000019325 9 0.965 - - - - - - - 0.965 - - uncharacterized LOC417973, transcript variant X1
41. PTPRD ENSGALG00000015058 37 0.965 - - - - - - - 0.965 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
42. MAML3 ENSGALG00000009809 2 0.958 - - - - - - - - - 0.958 mastermind like transcriptional coactivator 3 [Source:HGNC Symbol;Acc:HGNC:16272]
43. ENSGALG00000019522 ENSGALG00000019522 122 0.957 - - - - - - - 0.957 - -
44. RBP7 ENSGALG00000002637 11 0.953 - - - 0.953 - - - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
45. ENSGALG00000023731 ENSGALG00000023731 149 0.953 - - - - - - - 0.953 - -
46. SMYD1 ENSGALG00000015935 75 0.949 - - - - - - - 0.949 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
47. UNCX ENSGALG00000039292 165 0.947 - - - - - 0.947 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
48. DZANK1 ENSGALG00000008731 120 0.946 - - - - - - - 0.946 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
49. ABCC4 ENSGALG00000016896 154 0.946 - - - - - - - 0.946 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
50. ENSGALG00000021882 ENSGALG00000021882 63 0.945 - - - - - - - 0.945 - -
51. RNASET2 ENSGALG00000011426 40 0.941 - - - - - - - 0.941 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
52. PRSS35 ENSGALG00000015847 52 0.938 - - - - - - - 0.938 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
53. NRIP3 ENSGALG00000005903 58 0.937 - - - - - - - 0.937 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
54. LRRC47 7 0.934 - - - - - - - - - 0.934 leucine rich repeat containing 47
55. CECR2 ENSGALG00000013034 12 0.934 - - - - - - - - - 0.934 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
56. ABCB1LB ABCB1LB 4 0.934 - - - - - - - - - 0.934
57. ENSGALG00000027597 ENSGALG00000027597 13 0.934 - - - - - - - - - 0.934
58. HOXA1 ENSGALG00000028095 137 0.934 - - - - - - - - - 0.934 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
59. ENSGALG00000000443 ENSGALG00000000443 2 0.934 - - - - - - - - - 0.934
60. ENSGALG00000026501 ENSGALG00000026501 39 0.934 - - - - - - - - - 0.934
61. OPN4-1 ENSGALG00000041662 10 0.934 - - - - - - - - - 0.934 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
62. PDCL2 ENSGALG00000013783 9 0.934 - - - - - - - - - 0.934 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
63. IL16 ENSGALG00000006388 3 0.934 - - - - - - - - - 0.934 interleukin 16 [Source:NCBI gene;Acc:374270]
64. KCNA4 ENSGALG00000012142 6 0.934 - - - - - - - - - 0.934 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
65. FGF16 ENSGALG00000007806 8 0.934 - - - - - - - - - 0.934 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
66. GDA ENSGALG00000015141 21 0.934 - - - - - - - - - 0.934 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
67. CAMK1 ENSGALG00000029912 6 0.934 - - - - - - - - - 0.934 calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
68. ENSGALG00000024381 ENSGALG00000024381 9 0.934 - - - - - - - - - 0.934
69. CLDN15 ENSGALG00000038964 21 0.934 - - - - - - - - - 0.934 claudin 15, transcript variant X4
70. ENSGALG00000025879 ENSGALG00000025879 3 0.934 - - - - - - - - - 0.934
71. CALML3 ENSGALG00000008424 88 0.934 - - - - - - - - - 0.934 calmodulin like 3 [Source:NCBI gene;Acc:416692]
72. SNORD61 SNORD61 12 0.934 - - - - - - - - - 0.934
73. C18H17ORF67 ENSGALG00000024428 10 0.934 - - - - - - - - - 0.934 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
74. TMC3 ENSGALG00000006376 12 0.934 - - - - - - - - - 0.934 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
75. DDO ENSGALG00000015057 25 0.934 - - - - - - - - - 0.934 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
76. UPK3A ENSGALG00000014227 7 0.934 - - - - - - - - - 0.934 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
77. CD40 ENSGALG00000007015 7 0.934 - - - - - - - - - 0.934 CD40 molecule [Source:NCBI gene;Acc:395385]
78. ISM2 ENSGALG00000010468 1 0.934 - - - - - - - - - 0.934 isthmin 2, transcript variant X2
79. STXBP1 ENSGALG00000040003 157 0.928 - - - - - - - 0.928 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
80. ADCYAP1R1 ENSGALG00000005223 114 0.926 - - - - - - - 0.926 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
81. DCHS1 ENSGALG00000017334 12 0.925 - - - - - - - - - 0.925 dachsous cadherin-related 1, transcript variant X1
82. CCDC86 ENSGALG00000036935 5280 0.923 - - - - - - - 0.923 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
83. TRAF-5 TRAF-5 102 0.923 - - - - - - - 0.923 - -
84. CD200R1A CD200R1A 105 0.92 - - - - - - - 0.920 - -
85. ZNFX1 ENSGALG00000004859 33 0.919 - - - - - - - 0.919 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
86. FAM219A ENSGALG00000005821 52 0.919 - - - - - - - 0.919 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
87. MMEL1 ENSGALG00000001115 46 0.914 - - - - - - - 0.914 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
88. GPR61 ENSGALG00000040168 70 0.913 - - - - - - - 0.913 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
89. CNTN1 ENSGALG00000009523 158 0.913 - - - - - - - 0.913 - - contactin 1 [Source:NCBI gene;Acc:417786]
90. TP53I3 ENSGALG00000016502 178 0.913 - - - - - - - 0.913 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
91. ARHGEF37 ENSGALG00000039652 28 0.912 - - - - - - - 0.912 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
92. MFN2 ENSGALG00000004523 10 0.912 - - - - - - - - - 0.912 mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
93. SPINK4 ENSGALG00000043964 50 0.911 - - - - - - - 0.911 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
94. ARHGAP25 ENSGALG00000035194 74 0.907 - - - - - - - 0.907 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
95. WNT6 ENSGALG00000011358 1886 0.904 - - - - - - - - - 0.904 Wnt family member 6 [Source:NCBI gene;Acc:395235]
96. LCA5L ENSGALG00000016125 99 0.904 - - - - - - - 0.904 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
97. C1QTNF6 ENSGALG00000027067 493 0.9 - - - - - - - 0.900 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
98. VWA3B ENSGALG00000040709 5 0.898 - - - - - 0.898 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
99. WNT3 ENSGALG00000001079 8 0.898 - - - - - 0.898 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
100. INHBB ENSGALG00000028770 2 0.898 - - - - - 0.898 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]

There are 384 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA