Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDR42E1

Gene Name Gene ID Reads Annotation
SDR42E1 ENSGALG00000005456 586 short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]











Genes with expression patterns similar to SDR42E1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDR42E1 ENSGALG00000005456 586 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
2. GID4 ENSGALG00000004929 1949 1.416 - - - - 0.707 - - - 0.709 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
3. C10orf67 15 0.928 - - - - 0.928 - - - - - chromosome 10 open reading frame 67, transcript variant X2
4. CYR61 ENSGALG00000008661 43 0.928 - - - - 0.928 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
5. MCAM ENSGALG00000030027 26 0.927 - - - - 0.927 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
6. TJP3 ENSGALG00000000748 45 0.923 - - - - 0.923 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
7. GRIN1 ENSGALG00000008898 18 0.921 - - - - 0.921 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
8. TDRD12 ENSGALG00000004704 19 0.917 - - - - 0.917 - - - - - tudor domain containing 12, transcript variant X3
9. MRRF ENSGALG00000001333 2102 0.914 - - - - 0.914 - - - - - mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]
10. LMTK2 ENSGALG00000003479 46 0.914 - - - - 0.914 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
11. IRG1 IRG1 21 0.91 - - - - 0.910 - - - - -
12. TMCC1 ENSGALG00000008487 65 0.91 - - - - 0.910 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
13. ENSGALG00000025953 ENSGALG00000025953 65 0.907 - - - - 0.907 - - - - -
14. CCDC39 ENSGALG00000021855 23 0.905 - - - - 0.905 - - - - - coiled-coil domain containing 39
15. TMEM164 ENSGALG00000008076 734 0.903 - - - - 0.903 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
16. HAND1 ENSGALG00000035104 2351 0.902 - - - - - - - - 0.902 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
17. FAM208B 24 0.9 - - - - 0.900 - - - - - family with sequence similarity 208 member B, transcript variant X3
18. ERN2 ENSGALG00000027592 186 0.9 - - - - 0.900 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
19. SDCCAG3 1208 0.898 - - - - 0.898 - - - - - serologically defined colon cancer antigen 3
20. PHC2 62 0.898 - - - - 0.898 - - - - - polyhomeotic homolog 2
21. AANAT ENSGALG00000001955 23 0.897 - - - - 0.897 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
22. IFT81 ENSGALG00000003854 2534 0.892 - - - - - - - - 0.892 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
23. HDX ENSGALG00000007041 179 0.89 - - - - - - - - 0.890 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
24. SYT10 ENSGALG00000012911 17 0.889 - - - - 0.889 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
25. ENSGALG00000024018 ENSGALG00000024018 37 0.888 - - - - 0.888 - - - - -
26. PRDM4 ENSGALG00000012619 876 0.886 - - - - - - - - 0.886 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
27. RNF152 ENSGALG00000028822 291 0.881 - - - - - - - - 0.881 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
28. ANKIB1 ENSGALG00000031917 109 0.878 - - - - - - - - 0.878 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
29. RTDR1 RTDR1 104 0.877 - - - - 0.877 - - - - -
30. SETX ENSGALG00000003661 701 0.876 - - - - - - - - 0.876 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
31. LRP1B ENSGALG00000012407 125 0.87 - - - - 0.870 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
32. MAP3K21 ENSGALG00000011008 54 0.87 - - - - 0.870 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
33. DUSP10 ENSGALG00000009450 1041 0.864 - - - - - - - - 0.864 - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
34. LARP4B ENSGALG00000006672 57 0.86 - - - - 0.860 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
35. HKDC1 ENSGALG00000021039 134 0.857 - - - - - - - - 0.857 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
36. MARVELD3 ENSGALG00000012886 155 0.855 - - - - 0.855 - - - - - MARVEL domain containing 3
37. VIPAS39 ENSGALG00000010459 2090 0.854 - - - - - - - - 0.854 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
38. RNF207 2949 0.852 - - - - - - - - 0.852 - ring finger protein 207, transcript variant X1
39. CRAT ENSGALG00000037443 78 0.849 - - - - 0.849 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
40. NIF3L1 ENSGALG00000008226 1500 0.848 - - - - - - - - 0.848 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
41. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.845 - - - - 0.845 - - - - - homer scaffolding protein 3, transcript variant X4
42. FZD6 ENSGALG00000030626 3336 0.844 - - - - - - - - 0.844 - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
43. FRS2 ENSGALG00000009966 63 0.842 - - - - 0.842 - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
44. VPS51 ENSGALG00000004166 204 0.841 - - - - - - - - 0.841 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
45. SNX3 ENSGALG00000015304 1631 0.838 - - - - - - - - 0.838 - sorting nexin 3 [Source:NCBI gene;Acc:421772]
46. GLB1L ENSGALG00000011328 223 0.837 - - - - 0.837 - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
47. MUL1 ENSGALG00000042761 1312 0.834 - - - - 0.834 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
48. DEAF1 ENSGALG00000034225 439 0.833 - - - - 0.833 - - - - - DEAF1, transcription factor [Source:NCBI gene;Acc:423017]
49. EXOC3L1 ENSGALG00000001702 1355 0.828 - - - - - - - - 0.828 - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
50. CCDC180 109 0.827 - - - - 0.827 - - - - - coiled-coil domain containing 180
51. TH1L TH1L 1358 0.826 - - - - - - - - 0.826 -
52. ENGASE ENSGALG00000011816 1763 0.822 - - - - 0.822 - - - - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
53. RIF1 ENSGALG00000012484 2248 0.821 - - - - - - - - 0.821 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
54. RABL2B ENSGALG00000032458 678 0.821 - - - - - - - - 0.821 - RAB, member of RAS oncogene family like 2B [Source:NCBI gene;Acc:426865]
55. PAN3 ENSGALG00000017092 5387 0.82 - - - - - - - - 0.820 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
56. SIRT5 ENSGALG00000012692 3196 0.819 - - - - 0.819 - - - - - sirtuin 5 [Source:NCBI gene;Acc:420834]
57. FIGN ENSGALG00000011069 311 0.818 - - - - 0.818 - - - - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
58. CEP89 ENSGALG00000004756 282 0.816 - - - - 0.816 - - - - - centrosomal protein 89 [Source:HGNC Symbol;Acc:HGNC:25907]
59. IFT27 ENSGALG00000042990 221 0.813 - - - - - - - - 0.813 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
60. PRRG4 ENSGALG00000012032 96 0.812 - - - - 0.812 - - - - - proline rich and Gla domain 4 [Source:NCBI gene;Acc:421600]
61. ENSGALG00000028863 ENSGALG00000028863 665 0.811 - - - - 0.811 - - - - -
62. ENSGALG00000028221 ENSGALG00000028221 1663 0.81 - - - - 0.810 - - - - -
63. MED13 ENSGALG00000005230 1504 0.808 - - - - - - - - 0.808 - mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
64. SRRD ENSGALG00000005614 234 0.808 - - - - - - - - 0.808 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
65. HMGXB3 ENSGALG00000005770 119 0.807 - - - - - - - - 0.807 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
66. CNP ENSGALG00000003457 191 0.807 - - - - 0.807 - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:NCBI gene;Acc:395921]
67. VCPIP1 ENSGALG00000042883 139 0.806 - - - - - - - - 0.806 - valosin containing protein interacting protein 1 [Source:NCBI gene;Acc:428359]
68. CSPP1 1756 0.8 - - - - - - - - 0.800 - centrosome and spindle pole associated protein 1
69. ACVR2A ENSGALG00000012444 324 0.798 - - - - 0.798 - - - - - activin A receptor type 2A [Source:NCBI gene;Acc:396324]
70. ANO1 ENSGALG00000041808 5149 0.798 - - - - - - - - 0.798 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
71. BPHL ENSGALG00000029659 501 0.797 - - - - - - - - 0.797 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
72. GUF1 ENSGALG00000014217 211 0.796 - - - - 0.796 - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
73. FTSJ2 FTSJ2 2951 0.795 - - - - - - - - 0.795 -
74. TMEM64 ENSGALG00000042599 859 0.795 - - - - 0.795 - - - - - transmembrane protein 64 [Source:HGNC Symbol;Acc:HGNC:25441]
75. DNAJB14 ENSGALG00000014026 598 0.794 - - - - - - - - 0.794 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
76. MYO3A ENSGALG00000007647 643 0.789 - - - - - - - - 0.789 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
77. MYO9B ENSGALG00000003717 746 0.787 - - - - 0.787 - - - - - myosin IXB [Source:NCBI gene;Acc:420135]
78. SLC35C1 ENSGALG00000008438 486 0.786 - - - - 0.786 - - - - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
79. DNAJC27 ENSGALG00000028967 1127 0.786 - - - - 0.786 - - - - - DnaJ heat shock protein family (Hsp40) member C27 [Source:NCBI gene;Acc:402783]
80. RBMS1 ENSGALG00000011132 569 0.786 - - - - - - - - 0.786 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
81. FGF12 ENSGALG00000036971 2631 0.786 - - - - - - - - 0.786 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
82. NAIF1 ENSGALG00000027734 1551 0.786 - - - - 0.786 - - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
83. ENSGALG00000001398 ENSGALG00000001398 3248 0.785 - - - - 0.785 - - - - -
84. IRF2 ENSGALG00000010642 923 0.785 - - - - - - - - 0.785 - interferon regulatory factor 2 [Source:NCBI gene;Acc:396115]
85. DINB1 DINB1 113 0.783 - - - - 0.783 - - - - -
86. GALNT14 ENSGALG00000009078 126 0.783 - - - - - - - - 0.783 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
87. SSBP1 ENSGALG00000012876 34256 0.783 - - - - - - - - 0.783 - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
88. ENSGALG00000024348 ENSGALG00000024348 254 0.782 - - - - - - - - 0.782 -
89. E2F5 ENSGALG00000038915 3562 0.782 - - - - - - - 0.782 - - E2F transcription factor 5 [Source:NCBI gene;Acc:420206]
90. TMEM169 ENSGALG00000011493 1238 0.781 - - - - - - - - 0.781 - transmembrane protein 169 [Source:HGNC Symbol;Acc:HGNC:25130]
91. KLHL6 ENSGALG00000002263 308 0.781 - - - - 0.781 - - - - - kelch like family member 6 [Source:NCBI gene;Acc:424762]
92. KIF3B ENSGALG00000006604 2968 0.781 - - - - 0.781 - - - - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
93. APP ENSGALG00000015770 9438 0.779 - - - - - - - - 0.779 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
94. KIAA0232 ENSGALG00000015538 717 0.777 - - - - - - - - 0.777 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
95. SNRK ENSGALG00000039920 174 0.777 - - - - - - - - 0.777 - SNF related kinase [Source:NCBI gene;Acc:420675]
96. KIAA0408 ENSGALG00000030211 934 0.777 - - - - - - - - 0.777 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
97. KAT6B ENSGALG00000005035 301 0.775 - - - - 0.775 - - - - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
98. CIDEC ENSGALG00000026945 718 0.775 - - - - - - - - 0.775 - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
99. LIMK1 ENSGALG00000001076 1931 0.774 - - - - 0.774 - - - - - LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
100. MT-ND4L MT-ND4L 12537 0.772 - - - - - - - - 0.772 -

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA