Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDR16C5

Gene Name Gene ID Reads Annotation
SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]











Genes with expression patterns similar to SDR16C5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
2. FAM177A1 ENSGALG00000010046 4318 1.561 - - - - - 0.852 0.709 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
3. CENPP ENSGALG00000004687 6707 1.512 - - - - - - 0.739 - - 0.773 centromere protein P [Source:NCBI gene;Acc:415952]
4. TTC3 ENSGALG00000016050 4115 1.483 - - - - - 0.759 0.724 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
5. SRBD1 ENSGALG00000009990 4568 1.452 - - - - - 0.721 0.731 - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
6. C9orf96 C9orf96 43 0.926 - - - - - 0.926 - - - -
7. SCAF8 ENSGALG00000013635 421 0.919 - - - - - 0.919 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
8. ADNP2 ENSGALG00000035669 318 0.916 - - - - - 0.916 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
9. HJURP ENSGALG00000015363 54 0.913 - - - - - 0.913 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
10. MCC ENSGALG00000000208 61 0.913 - - - - - 0.913 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
11. NIPAL4 ENSGALG00000039687 29 0.912 - - - - - 0.912 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
12. DRD4 ENSGALG00000040761 79 0.912 - - - - - 0.912 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
13. KIF7 ENSGALG00000006611 33 0.911 - - - - - 0.911 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
14. SH2D1B ENSGALG00000028448 17 0.911 - - - - - 0.911 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
15. OLFML1 ENSGALG00000027184 19 0.911 - - - - - 0.911 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
16. AQP1 ENSGALG00000005209 111 0.909 - - - - - 0.909 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
17. C1orf168 C1orf168 98 0.909 - - - - - 0.909 - - - -
18. GPD1L2 ENSGALG00000012061 31 0.908 - - - - - 0.908 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
19. ORMDL3 ENSGALG00000029142 165 0.907 - - - - - 0.907 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
20. WHAMM ENSGALG00000006002 1678 0.904 - - - - - 0.904 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
21. COBL ENSGALG00000013102 84 0.902 - - - - - 0.902 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
22. SMOC2 ENSGALG00000011205 340 0.902 - - - - - 0.902 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
23. BLVRA ENSGALG00000031786 23 0.901 - - - - - 0.901 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
24. LOC419851 ENSGALG00000023953 80 0.899 - - - - - 0.899 - - - - complement component 4 binding protein, alpha chain
25. PON2 ENSGALG00000009689 1416 0.899 - - - - - 0.899 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
26. RAC3 ENSGALG00000040606 355 0.899 - - - - - 0.899 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
27. TERF1 ENSGALG00000037453 4497 0.898 - - - - - 0.898 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
28. GOLGA1 ENSGALG00000001025 334 0.895 - - - - - 0.895 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
29. PACSIN2 ENSGALG00000014159 601 0.893 - - - - - 0.893 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
30. ELMSAN1 ENSGALG00000009282 79 0.89 - - - - - 0.890 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
31. CLASP1 ENSGALG00000011645 1378 0.89 - - - - - 0.890 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
32. GTF3C4 ENSGALG00000031016 1221 0.89 - - - - - 0.890 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
33. DSEL ENSGALG00000042505 92 0.889 - - - - - 0.889 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
34. ENSGALG00000026461 ENSGALG00000026461 61 0.886 - - - - - 0.886 - - - -
35. GYPC ENSGALG00000011566 99 0.886 - - - - - 0.886 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
36. APLF ENSGALG00000008745 887 0.885 - - - - - 0.885 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
37. SPSB3 ENSGALG00000002285 1329 0.884 - - - - - 0.884 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
38. LTC4SL ENSGALG00000011450 645 0.883 - - - - - 0.883 - - - - leukotriene C4 synthase-like, transcript variant X3
39. KLHL40 ENSGALG00000005292 61 0.882 - - - - - 0.882 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
40. ASCC3 ENSGALG00000015465 259 0.879 - - - - - 0.879 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
41. ENSGALG00000002946 ENSGALG00000002946 56 0.878 - - - - - 0.878 - - - -
42. PNPLA4 ENSGALG00000016618 142 0.877 - - - - - 0.877 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
43. CDC14A ENSGALG00000005248 502 0.876 - - - - - 0.876 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
44. ABCC3 ENSGALG00000007522 340 0.872 - - - - - 0.872 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
45. CBX8 ENSGALG00000026548 1063 0.872 - - - - - 0.872 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
46. FGD4 ENSGALG00000012932 50 0.871 - - - - - 0.871 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
47. TTC7A ENSGALG00000010020 793 0.868 - - - - - 0.868 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
48. POLB ENSGALG00000040828 7462 0.867 - - - - - 0.867 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
49. SERPINB1 ENSGALG00000019555 29 0.867 - - - - - 0.867 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
50. SERPINF2 ENSGALG00000002987 236 0.864 - - - - - 0.864 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
51. TMEM63A ENSGALG00000009275 1481 0.862 - - - - - 0.862 - - - - transmembrane protein 63A [Source:HGNC Symbol;Acc:HGNC:29118]
52. ACN9 ACN9 269 0.861 - - - - - 0.861 - - - -
53. MLF1 ENSGALG00000009654 619 0.857 - - - - - 0.857 - - - - myeloid leukemia factor 1, transcript variant X3
54. TPCN3 ENSGALG00000008198 124 0.857 - - - - - 0.857 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
55. EVC2 ENSGALG00000015029 51 0.853 - - - - - 0.853 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
56. JAKMIP2 ENSGALG00000007593 95 0.852 - - - - - 0.852 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
57. SKA2 ENSGALG00000005090 24296 0.852 - - - - - 0.852 - - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
58. C19H17ORF85 C19H17ORF85 2538 0.852 - - - - - 0.852 - - - -
59. PRKAR1A ENSGALG00000004237 4785 0.85 - - - - - 0.850 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
60. WDR59 ENSGALG00000002798 815 0.848 - - - - - 0.848 - - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
61. DBT ENSGALG00000005280 2893 0.848 - - - - - 0.848 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
62. C1H12ORF4 2696 0.845 - - - - - 0.845 - - - - chromosome 1 open reading frame, human C12orf4
63. BYSL ENSGALG00000003467 7555 0.845 - - - - - 0.845 - - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
64. ATG10 ENSGALG00000027714 1100 0.845 - - - - - 0.845 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
65. ENSGALG00000004127 ENSGALG00000004127 566 0.844 - - - - - 0.844 - - - -
66. PRKDC ENSGALG00000042469 449 0.843 - - - - - 0.843 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
67. PCSK5 ENSGALG00000033256 674 0.842 - - - - - 0.842 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
68. CELF1 ENSGALG00000008097 4717 0.841 - - - - - 0.841 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
69. CARKD CARKD 2914 0.84 - - - - - 0.840 - - - -
70. VPRBP VPRBP 4037 0.84 - - - - - 0.840 - - - -
71. POT1 ENSGALG00000008740 947 0.839 - - - - - 0.839 - - - - protection of telomeres 1 [Source:NCBI gene;Acc:404538]
72. LEMD3 ENSGALG00000009873 347 0.839 - - - - - 0.839 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
73. MXRA5 ENSGALG00000016635 352 0.839 - - - - - 0.839 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
74. BRAT1 ENSGALG00000004348 158 0.838 - - - - - 0.838 - - - - BRCA1 associated ATM activator 1, transcript variant X3
75. LOC415478 ENSGALG00000021171 100 0.837 - - - - - 0.837 - - - - transmembrane protein 2-like, transcript variant X2
76. PRUNE PRUNE 452 0.836 - - - - - 0.836 - - - -
77. CRCP ENSGALG00000002587 8809 0.835 - - - - - 0.835 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
78. DIAPH3 ENSGALG00000016937 1069 0.833 - - - - - 0.833 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
79. LRRC57 ENSGALG00000009112 1443 0.832 - - - - - 0.832 - - - - leucine rich repeat containing 57 [Source:NCBI gene;Acc:423236]
80. EIF2AK4 ENSGALG00000009611 2164 0.828 - - - - - 0.828 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
81. NAIF1 ENSGALG00000027734 1551 0.828 - - - - - 0.828 - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
82. UBA6 ENSGALG00000011762 753 0.827 - - - - - 0.827 - - - - ubiquitin like modifier activating enzyme 6 [Source:HGNC Symbol;Acc:HGNC:25581]
83. GCHFR ENSGALG00000032239 1608 0.825 - - - - - 0.825 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
84. WARS ENSGALG00000011228 193 0.824 - - - - - 0.824 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
85. STMN3 ENSGALG00000006130 151 0.822 - - - - - 0.822 - - - - stathmin 3 [Source:NCBI gene;Acc:419263]
86. XPC ENSGALG00000006357 2484 0.82 - - - - - 0.820 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
87. AFG3L2_1 ENSGALG00000013853 1319 0.82 - - - - - 0.820 - - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
88. SLC9A9 ENSGALG00000002374 179 0.819 - - - - - 0.819 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
89. DDC ENSGALG00000013094 230 0.818 - - - - - 0.818 - - - - dopa decarboxylase [Source:HGNC Symbol;Acc:HGNC:2719]
90. GBAS 18453 0.818 - - - - - 0.818 - - - - glioblastoma amplified sequence
91. COX7C ENSGALG00000027963 84312 0.815 - - - - - 0.815 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
92. COL4A6 ENSGALG00000008266 6374 0.814 - - - - - - 0.814 - - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
93. NKIRAS1 ENSGALG00000011289 311 0.813 - - - - - 0.813 - - - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
94. HIBADH ENSGALG00000033207 3540 0.813 - - - - - 0.813 - - - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
95. E4F1 ENSGALG00000005900 1814 0.811 - - - - - 0.811 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
96. CADPS2 ENSGALG00000008926 398 0.809 - - - - - 0.809 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
97. VRK2 ENSGALG00000032770 117 0.807 - - - - - 0.807 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
98. C1orf216 ENSGALG00000002353 1886 0.805 - - - - - - 0.805 - - - chromosome 1 open reading frame 216 [Source:HGNC Symbol;Acc:HGNC:26800]
99. SMCHD1 ENSGALG00000014811 730 0.804 - - - - - 0.804 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
100. GDE1 ENSGALG00000006916 1040 0.803 - - - - - 0.803 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]

There are 253 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA