Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDOS

Gene Name Gene ID Reads Annotation
SDOS SDOS 66125











Genes with expression patterns similar to SDOS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDOS SDOS 66125 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. MRPS25 ENSGALG00000008506 12131 1.871 - - - - 0.877 - 0.994 - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
3. ACTG1 ENSGALG00000001381 63905 1.503 - - - - 0.798 0.705 - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
4. ERH ENSGALG00000017384 74926 1.497 - - - - 0.740 - - - 0.757 - ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
5. ARPC3 ENSGALG00000003820 29128 0.996 - - - - - - 0.996 - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
6. CDCA3 ENSGALG00000014513 17047 0.995 - - - - - - 0.995 - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
7. WDR1 ENSGALG00000014957 15700 0.995 - - - - - - 0.995 - - - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
8. GMPS ENSGALG00000010284 8765 0.994 - - - - - - 0.994 - - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
9. UBP1 ENSGALG00000035630 13359 0.994 - - - - - - 0.994 - - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
10. MRPL51 ENSGALG00000014435 29348 0.994 - - - - - - 0.994 - - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
11. HAUS6 ENSGALG00000015091 9671 0.994 - - - - - - 0.994 - - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
12. DDT ENSGALG00000006350 16117 0.994 - - - - - - 0.994 - - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
13. SEC13 ENSGALG00000008419 18388 0.994 - - - - - - 0.994 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
14. CENPL ENSGALG00000038411 4867 0.993 - - - - - - 0.993 - - - centromere protein L [Source:NCBI gene;Acc:426563]
15. HDHD2 ENSGALG00000034801 6373 0.993 - - - - - - 0.993 - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
16. MKKS ENSGALG00000009013 9301 0.993 - - - - - - 0.993 - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
17. DOHH ENSGALG00000017524 9420 0.993 - - - - - - 0.993 - - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
18. CDH5 ENSGALG00000032349 8526 0.993 - - - - - - 0.993 - - - cadherin 5 [Source:NCBI gene;Acc:374068]
19. TAF13 ENSGALG00000015185 11410 0.993 - - - - - - 0.993 - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
20. SAMHD1 ENSGALG00000001231 5218 0.993 - - - - - - 0.993 - - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
21. CARHSP1 ENSGALG00000042981 6920 0.993 - - - - - - 0.993 - - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
22. PSMA3 ENSGALG00000012039 26539 0.993 - - - - - - 0.993 - - - proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
23. MED10 ENSGALG00000028336 9343 0.993 - - - - - - 0.993 - - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
24. NUP214 ENSGALG00000041111 4902 0.993 - - - - - - 0.993 - - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
25. REPS1 ENSGALG00000013829 2271 0.992 - - - - - - 0.992 - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
26. NEIL1 ENSGALG00000001586 2292 0.992 - - - - - - 0.992 - - - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
27. WRN ENSGALG00000040909 3645 0.992 - - - - - - 0.992 - - - Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
28. FANCE ENSGALG00000002561 3532 0.992 - - - - - - 0.992 - - - Fanconi anemia complementation group E
29. TNNI1 ENSGALG00000000313 4069 0.992 - - - - - - 0.992 - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
30. GLCCI1 ENSGALG00000035239 22149 0.991 - - - - - - 0.991 - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
31. CCT6 CCT6 65150 0.949 - - - - - - 0.949 - - -
32. ENSGALG00000023447 ENSGALG00000023447 17486 0.928 - - - - 0.928 - - - - -
33. RPL24 ENSGALG00000015339 227460 0.927 - - - - 0.927 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
34. LARP1 ENSGALG00000040109 14808 0.917 - - - - 0.917 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
35. PSMC2 ENSGALG00000008236 25980 0.911 - - - - 0.911 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
36. PSPC1 ENSGALG00000017142 13036 0.909 - - - - 0.909 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
37. GPN3 ENSGALG00000003807 6320 0.904 - - - - 0.904 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
38. IGDCC4 ENSGALG00000007410 5457 0.9 - - - - 0.900 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
39. PTTG1 17936 0.898 - - - - 0.898 - - - - - pituitary tumor-transforming 1, transcript variant X1
40. EXO1 ENSGALG00000010748 7572 0.897 - - - - 0.897 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
41. FAM120A ENSGALG00000039316 28650 0.896 - - - - - - 0.896 - - - family with sequence similarity 120A, transcript variant X1
42. PCBP4 ENSGALG00000027695 7937 0.896 - - - - 0.896 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
43. CCT4 ENSGALG00000008812 78267 0.896 - - - - 0.896 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
44. EIF3M ENSGALG00000012109 38661 0.894 - - - - - - - 0.894 - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
45. RAP1B ENSGALG00000009927 26562 0.893 - - - - 0.893 - - - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
46. CDC42SE2 ENSGALG00000027258 4725 0.893 - - - - 0.893 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
47. FH ENSGALG00000013165 13669 0.891 - - - - 0.891 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
48. RANGAP1 ENSGALG00000011966 20170 0.891 - - - - 0.891 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
49. PTPN12 9302 0.891 - - - - 0.891 - - - - - protein tyrosine phosphatase, non-receptor type 12
50. ENSGALG00000007509 ENSGALG00000007509 18441 0.891 - - - - - - - 0.891 - -
51. SH2D3C ENSGALG00000005036 5101 0.89 - - - - 0.890 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
52. ATP2A2 ENSGALG00000032287 12734 0.888 - - - - 0.888 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
53. GBAS 18453 0.887 - - - - 0.887 - - - - - glioblastoma amplified sequence
54. MKI67 ENSGALG00000025996 28136 0.884 - - - - 0.884 - - - - - marker of proliferation Ki-67, transcript variant X3
55. SFSWAP ENSGALG00000002487 9977 0.884 - - - - 0.884 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
56. YY1 ENSGALG00000017388 1933 0.884 - - - - 0.884 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
57. RAB12 ENSGALG00000033608 14160 0.883 - - - - 0.883 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
58. C20H20ORF24 ENSGALG00000001054 22026 0.882 - - - - 0.882 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
59. CSNK1G1 ENSGALG00000030812 31618 0.882 - - - - 0.882 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
60. COMMD8 ENSGALG00000026279 13509 0.882 - - - - 0.882 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
61. FERMT2 ENSGALG00000012425 5480 0.882 - - - - 0.882 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
62. POLR3F ENSGALG00000008749 5645 0.882 - - - - 0.882 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
63. ATG5 ENSGALG00000015387 7752 0.882 - - - - 0.882 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
64. PLAA ENSGALG00000001782 5459 0.881 - - - - 0.881 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
65. OLA1 ENSGALG00000009325 26414 0.881 - - - - 0.881 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
66. TMEM165 ENSGALG00000027886 5468 0.88 - - - - 0.880 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
67. AATF ENSGALG00000005420 6501 0.88 - - - - 0.880 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
68. NOP58 ENSGALG00000008454 34630 0.88 - - - - 0.880 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
69. PNRC2 ENSGALG00000004122 19228 0.879 - - - - 0.879 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
70. MRPL23 ENSGALG00000006561 13737 0.879 - - - - 0.879 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
71. PUM1 ENSGALG00000042598 9392 0.878 - - - - 0.878 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
72. REEP5 ENSGALG00000023157 6282 0.878 - - - - 0.878 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
73. STK3 ENSGALG00000032850 6339 0.878 - - - - 0.878 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
74. NAA25 ENSGALG00000041821 12729 0.877 - - - - 0.877 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
75. TLCD1 ENSGALG00000003973 17569 0.877 - - - - 0.877 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
76. DRAXIN ENSGALG00000004631 3122 0.875 - - - - 0.875 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
77. SSR2 ENSGALG00000000764 32190 0.874 - - - - 0.874 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
78. WDR82 ENSGALG00000025904 4783 0.874 - - - - 0.874 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
79. NAP1L1 ENSGALG00000010238 14506 0.873 - - - - 0.873 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
80. ENSGALG00000014852 ENSGALG00000014852 15288 0.873 - - - - 0.873 - - - - -
81. ZBTB10 ENSGALG00000034376 3271 0.873 - - - - 0.873 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
82. TBCA ENSGALG00000004353 18510 0.873 - - - - 0.873 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
83. CBWD1 ENSGALG00000010147 2765 0.873 - - - - 0.873 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
84. TCP11L1 ENSGALG00000011688 2427 0.872 - - - - 0.872 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
85. STRAP ENSGALG00000013092 13100 0.872 - - - - 0.872 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
86. TLK2 ENSGALG00000000410 4690 0.872 - - - - 0.872 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
87. COIL ENSGALG00000003158 7806 0.872 - - - - 0.872 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
88. CZH9ORF41 CZH9ORF41 3492 0.872 - - - - 0.872 - - - - -
89. ELL2 ENSGALG00000014678 1111 0.871 - - - - 0.871 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
90. KNOP1 ENSGALG00000002042 6251 0.871 - - - - 0.871 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
91. SIRT1 ENSGALG00000002761 9028 0.87 - - - - 0.870 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
92. USB1 ENSGALG00000035604 4003 0.87 - - - - - - - 0.870 - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
93. SHROOM2 ENSGALG00000030802 4517 0.87 - - - - 0.870 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
94. SSPN ENSGALG00000014042 638 0.869 - - - - 0.869 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
95. DHFR ENSGALG00000026757 18478 0.869 - - - - 0.869 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
96. EAPP ENSGALG00000010007 5080 0.869 - - - - 0.869 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
97. TRAPPC12 ENSGALG00000016387 2593 0.869 - - - - 0.869 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
98. XPO7 ENSGALG00000001838 1875 0.869 - - - - 0.869 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
99. CTSZ ENSGALG00000007462 630 0.869 - - - - 0.869 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
100. SAR1B ENSGALG00000038753 6493 0.869 - - - - 0.869 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]

There are 98 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA