Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDHD

Gene Name Gene ID Reads Annotation
SDHD ENSGALG00000007878 25129 succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]











Genes with expression patterns similar to SDHD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDHD ENSGALG00000007878 25129 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
2. DCAF7 ENSGALG00000000510 8681 1.71 - - - - - - 0.873 0.837 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
3. COPB2 ENSGALG00000005357 15208 1.71 - - - - - - 0.762 0.948 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
4. SNRNP40 ENSGALG00000000615 32298 1.685 - - - - - - 0.899 0.786 - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
5. SRI ENSGALG00000008985 13865 1.682 - - - - - - 0.749 0.933 - - sorcin [Source:NCBI gene;Acc:420538]
6. GALNT1 ENSGALG00000013135 13583 1.646 - - - - - - 0.821 0.825 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
7. ALG2 ENSGALG00000013573 5229 1.643 - - - - - - 0.707 0.936 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
8. NDUFAF2 ENSGALG00000027564 7302 1.63 - - - - - - 0.800 0.830 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
9. EGLN1 ENSGALG00000041422 11032 1.619 - - - - - - 0.886 0.733 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
10. ST5 6869 1.613 - - - - - - 0.791 0.822 - - suppression of tumorigenicity 5, transcript variant X1
11. C3H6ORF120 C3H6ORF120 2712 1.611 - - - - - - 0.785 0.826 - -
12. COMMD7 ENSGALG00000006630 11491 1.602 - - - - - - 0.779 0.823 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
13. gga-mir-1778 ENSGALG00000025181 8765 1.595 - - - - - - 0.710 0.885 - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
14. CUTC ENSGALG00000037283 2530 1.57 - - - - - - 0.745 0.825 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
15. NABP1 ENSGALG00000025884 4195 1.559 - - - - - - 0.727 0.832 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
16. DYRK2 ENSGALG00000009901 3141 1.548 - - - - - - 0.736 0.812 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
17. PTCD3 ENSGALG00000015773 3059 1.538 - - - - - - 0.816 0.722 - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
18. MFN1 ENSGALG00000041873 4170 1.536 - - - - - - 0.710 0.826 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
19. TXNDC17 ENSGALG00000027950 45004 1.517 - - - - 0.726 - 0.791 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
20. NUPL1 NUPL1 8197 1.51 - - - - - - 0.781 0.729 - -
21. NDUFS7 ENSGALG00000009703 19674 1.47 - - - - - - 0.750 0.720 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
22. SIKE1 ENSGALG00000002147 20836 1.451 - - - - - - 0.734 0.717 - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
23. CLNS1A ENSGALG00000008574 25675 0.908 - - - - - - 0.908 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
24. TFDP1 ENSGALG00000016823 17019 0.898 - - - - - - 0.898 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
25. TTC37 ENSGALG00000014670 5715 0.898 - - - - - - 0.898 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
26. OSTC ENSGALG00000010526 19422 0.894 - - - - - - 0.894 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
27. RRP1B ENSGALG00000035696 12309 0.894 - - - - - - 0.894 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
28. SMC4 ENSGALG00000009553 15715 0.894 - - - - - - 0.894 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
29. PTTG1 17936 0.892 - - - - - - 0.892 - - - pituitary tumor-transforming 1, transcript variant X1
30. LAPTM4A ENSGALG00000016479 15973 0.892 - - - - - - 0.892 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
31. KIAA0020 KIAA0020 14353 0.891 - - - - - - 0.891 - - -
32. DNM1L ENSGALG00000012929 6174 0.89 - - - - - - 0.890 - - - dynamin 1 like [Source:NCBI gene;Acc:418132]
33. CCDC12 ENSGALG00000005487 8190 0.889 - - - - - - 0.889 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
34. KRR1 ENSGALG00000010227 11783 0.889 - - - - - - 0.889 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
35. PGAM5 ENSGALG00000002137 7700 0.888 - - - - - - 0.888 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
36. OCIAD1 ENSGALG00000014081 12065 0.883 - - - - - - 0.883 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
37. R3HDM1 ENSGALG00000012246 6580 0.882 - - - - - - 0.882 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
38. SNRNP27 ENSGALG00000013883 22212 0.879 - - - - - - 0.879 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
39. GPATCH1 ENSGALG00000004839 6455 0.878 - - - - - - - 0.878 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
40. DERL1 ENSGALG00000033950 15074 0.877 - - - - - - 0.877 - - - derlin 1 [Source:NCBI gene;Acc:420350]
41. MRPL50 ENSGALG00000015543 11649 0.876 - - - - - - 0.876 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
42. MRPL47 ENSGALG00000013759 9044 0.873 - - - - - - 0.873 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
43. MCFD2 ENSGALG00000010017 8905 0.872 - - - - - - 0.872 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
44. WBSCR22 6082 0.87 - - - - - - 0.870 - - - Williams-Beuren syndrome chromosome region 22
45. CMPK CMPK 9569 0.867 - - - - - - 0.867 - - -
46. GMPPB ENSGALG00000002500 9454 0.866 - - - - - - 0.866 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
47. DAD1 ENSGALG00000035626 32604 0.864 - - - - - - 0.864 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
48. TAF3 ENSGALG00000006731 15569 0.861 - - - - - - 0.861 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
49. PPP1CC ENSGALG00000004571 14748 0.861 - - - - - - 0.861 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
50. NDUFC2 ENSGALG00000029172 26136 0.86 - - - - - - 0.860 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
51. YWHAZ ENSGALG00000031387 84985 0.86 - - - - - - 0.860 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
52. C12ORF57 C12ORF57 25906 0.86 - - - - - - 0.860 - - -
53. RABGGTB ENSGALG00000011388 11654 0.859 - - - - - - 0.859 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
54. MRPL39 ENSGALG00000015742 7025 0.859 - - - - - - 0.859 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
55. FUNDC2 ENSGALG00000029585 9334 0.859 - - - - - - 0.859 - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
56. CTBP1 ENSGALG00000039942 9383 0.857 - - - - - - 0.857 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
57. ADRM1 ENSGALG00000005200 5417 0.857 - - - - - - 0.857 - - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
58. THUMPD3 ENSGALG00000008394 17711 0.857 - - - - - - 0.857 - - - THUMP domain containing 3, transcript variant X2
59. LLPH ENSGALG00000019358 20976 0.856 - - - - - - 0.856 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
60. TFB2M ENSGALG00000010651 4374 0.856 - - - - - - 0.856 - - - transcription factor B2, mitochondrial
61. HARS ENSGALG00000035080 11602 0.855 - - - - - - 0.855 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
62. ZNHIT3 ENSGALG00000026031 8652 0.855 - - - - - - 0.855 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
63. DCPS ENSGALG00000031143 10191 0.855 - - - - - - 0.855 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
64. RPS6KA RPS6KA 6745 0.854 - - - - - - 0.854 - - -
65. C14orf1 C14orf1 14289 0.854 - - - - - - 0.854 - - -
66. C1QBP ENSGALG00000001654 34814 0.852 - - - - - - 0.852 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
67. RTCB ENSGALG00000012611 14360 0.852 - - - - - - 0.852 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
68. BLM ENSGALG00000008256 6160 0.851 - - - - - - 0.851 - - - Bloom syndrome RecQ like helicase [Source:NCBI gene;Acc:415577]
69. NOP58 ENSGALG00000008454 34630 0.851 - - - - - - 0.851 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
70. PREP ENSGALG00000015405 17050 0.85 - - - - - - 0.850 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
71. NUP50 ENSGALG00000014222 11743 0.849 - - - - - - 0.849 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
72. NDUFA12 ENSGALG00000011325 19807 0.849 - - - - - - 0.849 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
73. SUCLG2 ENSGALG00000007652 9688 0.848 - - - - - - 0.848 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
74. CDC23 ENSGALG00000007610 11945 0.848 - - - - - - 0.848 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
75. DDX27 ENSGALG00000006974 18388 0.848 - - - - - - 0.848 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
76. FAM63B 3793 0.848 - - - - - - 0.848 - - - family with sequence similarity 63 member B
77. IGF2BP2 ENSGALG00000033195 11421 0.847 - - - - - - 0.847 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
78. CDC40 ENSGALG00000015061 6118 0.847 - - - - - - 0.847 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
79. KIF2C ENSGALG00000010120 8999 0.847 - - - - - - 0.847 - - - kinesin family member 2C, transcript variant X1
80. TTYH2 ENSGALG00000026940 15628 0.847 - - - - - - 0.847 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
81. HSPA4 ENSGALG00000040882 20966 0.847 - - - - - - 0.847 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
82. WASF1 ENSGALG00000015066 5628 0.846 - - - - - - 0.846 - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
83. BIRC6 ENSGALG00000010541 7999 0.846 - - - - - - 0.846 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
84. WDR51B WDR51B 5757 0.844 - - - - - - 0.844 - - -
85. PSMB2 ENSGALG00000026421 51885 0.842 - - - - - - 0.842 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
86. DKC1 ENSGALG00000005054 30350 0.841 - - - - - - 0.841 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
87. HMGB2 ENSGALG00000010745 89235 0.841 - - - - - - 0.841 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
88. PPP3CB ENSGALG00000005243 8794 0.841 - - - - - - - 0.841 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
89. TK2 ENSGALG00000034216 5394 0.841 - - - - - - 0.841 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
90. C4H4ORF52 C4H4ORF52 8116 0.841 - - - - - - 0.841 - - -
91. LMAN2 ENSGALG00000033232 11740 0.84 - - - - - - 0.840 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
92. DHX38 ENSGALG00000000787 6913 0.84 - - - - - - 0.840 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
93. GLRX3 ENSGALG00000010464 22578 0.839 - - - - - - 0.839 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
94. CCNH ENSGALG00000015641 8051 0.839 - - - - - - 0.839 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
95. FNBP1L ENSGALG00000005850 9219 0.839 - - - - - - 0.839 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
96. TMEM167A ENSGALG00000027332 13862 0.838 - - - - - - 0.838 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
97. PARP1 ENSGALG00000009228 39433 0.838 - - - - - - 0.838 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
98. TERF2 ENSGALG00000000657 7865 0.838 - - - - - - 0.838 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
99. NASP ENSGALG00000010255 28423 0.837 - - - - - - 0.837 - - - nuclear autoantigenic sperm protein, transcript variant X3
100. KIF11 ENSGALG00000030597 5528 0.837 - - - - - - 0.837 - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]

There are 781 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA