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Results for SDF4

Gene Name Gene ID Reads Annotation
SDF4 ENSGALG00000001872 6382 stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]











Genes with expression patterns similar to SDF4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDF4 ENSGALG00000001872 6382 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
2. LEPROTL1 ENSGALG00000024482 4251 1.72 - - - - 0.766 - 0.954 - - - leptin receptor overlapping transcript-like 1
3. MED7 ENSGALG00000003870 4244 1.709 - - - - - - 0.935 0.774 - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
4. INTS10 ENSGALG00000010130 6320 1.693 - - - - - - 0.951 - - 0.742 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
5. MSRA ENSGALG00000028032 2607 1.678 - - - - - - 0.945 0.733 - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
6. KLHL29 ENSGALG00000016495 582 1.662 - - - - - - 0.929 0.733 - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
7. LACTB2 ENSGALG00000038745 3460 1.656 - - - - - - 0.948 - - 0.708 lactamase beta 2 [Source:NCBI gene;Acc:420178]
8. NARS ENSGALG00000040506 9506 1.637 - - - - - - 0.899 - - 0.738 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
9. MRPL50 ENSGALG00000015543 11649 1.589 - - - - - - - 0.864 - 0.725 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
10. PSMB3 ENSGALG00000001597 22588 1.579 - - - - - - 0.854 0.725 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
11. FBXO38 ENSGALG00000038627 2658 1.575 - - - - - - - 0.778 - 0.797 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
12. ZMYM2 ENSGALG00000017139 3747 1.546 - - - - - - 0.839 0.707 - - zinc finger MYM-type containing 2, transcript variant X10
13. PSMC2 ENSGALG00000008236 25980 1.543 - - - - - - 0.829 - - 0.714 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
14. SPTSSA ENSGALG00000025755 3361 1.531 - - - - - - - 0.791 - 0.740 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
15. SPDL1 ENSGALG00000001942 4403 1.513 - - - - - - - 0.768 - 0.745 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
16. STRADA ENSGALG00000000550 6912 1.481 - - - - - - - 0.747 - 0.734 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
17. CRYM ENSGALG00000002484 3558 1.465 - - - - - - - 0.711 - 0.754 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
18. MRPL2 ENSGALG00000008597 16500 1.459 - - - - 0.707 - - 0.752 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
19. ATG16L1 ENSGALG00000001619 3562 1.453 - - - - - - - 0.734 - 0.719 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
20. GCSH ENSGALG00000032679 29231 1.45 - - - - - - - 0.728 - 0.722 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
21. CCNE1 ENSGALG00000004494 4945 1.435 - - - - - - 0.718 0.717 - - cyclin E1 [Source:NCBI gene;Acc:426117]
22. PPFIA1 ENSGALG00000035774 5258 1.434 - - - - - - - 0.708 - 0.726 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
23. SOD2 ENSGALG00000011661 13178 0.974 - - - - - - 0.974 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
24. TM9SF3 ENSGALG00000005534 15290 0.973 - - - - - - 0.973 - - - transmembrane 9 superfamily member 3
25. SEMA4B ENSGALG00000008297 11202 0.971 - - - - - - 0.971 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
26. ENSGALG00000027854 ENSGALG00000027854 5007 0.97 - - - - - - 0.970 - - -
27. BPTF ENSGALG00000038222 7521 0.969 - - - - - - 0.969 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
28. POLR3E ENSGALG00000007008 4010 0.969 - - - - - - 0.969 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
29. DNA2 ENSGALG00000004037 5426 0.969 - - - - - - 0.969 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
30. RBM12B ENSGALG00000035129 4314 0.969 - - - - - - 0.969 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
31. METTL11A METTL11A 11876 0.968 - - - - - - 0.968 - - -
32. EI24 ENSGALG00000038097 24081 0.967 - - - - - - 0.967 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
33. E2F6 ENSGALG00000016454 4747 0.967 - - - - - - 0.967 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
34. OGFOD1 6926 0.965 - - - - - - 0.965 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
35. AP2B1 ENSGALG00000042125 13229 0.965 - - - - - - 0.965 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
36. H2AFY_1 ENSGALG00000040141 4895 0.965 - - - - - - 0.965 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
37. NDUFA9 ENSGALG00000017282 14358 0.965 - - - - - - 0.965 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
38. NCOA4 ENSGALG00000002066 10544 0.963 - - - - - - 0.963 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
39. POR ENSGALG00000002053 5223 0.963 - - - - - - 0.963 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
40. PPP3R1 ENSGALG00000023648 3417 0.962 - - - - - - 0.962 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
41. RILPL2 ENSGALG00000003321 5632 0.961 - - - - - - 0.961 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
42. KCTD9 ENSGALG00000000275 3455 0.96 - - - - - - 0.960 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
43. PMM2 ENSGALG00000007326 8260 0.96 - - - - - - 0.960 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
44. ABCD3 ENSGALG00000005647 4844 0.959 - - - - - - 0.959 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
45. CLCN3 ENSGALG00000009674 3704 0.959 - - - - - - 0.959 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
46. SIRT1 ENSGALG00000002761 9028 0.959 - - - - - - 0.959 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
47. GCLM ENSGALG00000005782 15789 0.958 - - - - - - 0.958 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
48. SCRN1 ENSGALG00000011176 3783 0.957 - - - - - - 0.957 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
49. IRAK2 ENSGALG00000008407 5934 0.957 - - - - - - 0.957 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
50. MOB2 ENSGALG00000030499 3658 0.956 - - - - - - 0.956 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
51. MYST2 MYST2 8078 0.956 - - - - - - 0.956 - - -
52. ATE1 ENSGALG00000009502 3751 0.956 - - - - - - 0.956 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
53. CCND1 ENSGALG00000007555 6715 0.955 - - - - - - 0.955 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
54. RRN3 ENSGALG00000041989 3934 0.955 - - - - - - 0.955 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
55. ARID4A ENSGALG00000012037 8554 0.955 - - - - - - 0.955 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
56. PNO1 ENSGALG00000009093 11153 0.955 - - - - - - 0.955 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
57. RPA1 ENSGALG00000003072 8023 0.954 - - - - - - 0.954 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
58. TRAM1 ENSGALG00000041112 22876 0.954 - - - - - - 0.954 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
59. MRE11A MRE11A 5754 0.954 - - - - - - 0.954 - - -
60. ARNT2 ENSGALG00000006445 7050 0.954 - - - - - - 0.954 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
61. MED6 ENSGALG00000029743 9414 0.953 - - - - - - 0.953 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
62. BFAR ENSGALG00000003111 1778 0.952 - - - - - - 0.952 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
63. ARHGAP29 ENSGALG00000005683 3622 0.952 - - - - - - 0.952 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
64. AK6 ENSGALG00000020534 4791 0.952 - - - - - - 0.952 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
65. NDUFB8 ENSGALG00000005704 5781 0.952 - - - - - - 0.952 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
66. HDGFL3 ENSGALG00000006036 13576 0.952 - - - - - - 0.952 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
67. AKAP7 ENSGALG00000029794 3287 0.952 - - - - - - 0.952 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
68. LATS2 4776 0.951 - - - - - - 0.951 - - - large tumor suppressor kinase 2
69. EIF4G3 ENSGALG00000010084 5881 0.95 - - - - - - 0.950 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
70. XRN1 ENSGALG00000002706 4014 0.949 - - - - - - 0.949 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
71. ZMYND11 ENSGALG00000006599 5740 0.948 - - - - - - 0.948 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
72. RBBP6 ENSGALG00000006043 9708 0.948 - - - - - - 0.948 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
73. SHQ1 ENSGALG00000007798 1982 0.948 - - - - - - 0.948 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
74. YBX1 ENSGALG00000004848 20992 0.946 - - - - - - 0.946 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
75. DISP1 3281 0.946 - - - - - - 0.946 - - - dispatched RND transporter family member 1, transcript variant X3
76. WBP11 ENSGALG00000011745 11182 0.946 - - - - - - 0.946 - - - WW domain binding protein 11, transcript variant X1
77. DNAJA3 ENSGALG00000007821 3963 0.944 - - - - - - 0.944 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
78. MAP1LC3A ENSGALG00000038721 2230 0.944 - - - - - - 0.944 - - - microtubule associated protein 1 light chain 3 alpha
79. TBCCD1 ENSGALG00000006566 2696 0.944 - - - - - - 0.944 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
80. gga-mir-6643 ENSGALG00000027935 4442 0.944 - - - - - - 0.944 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
81. PPIF ENSGALG00000004809 5586 0.943 - - - - - - 0.943 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
82. ATN1 ENSGALG00000014554 3270 0.943 - - - - - - 0.943 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
83. LARP1 ENSGALG00000040109 14808 0.943 - - - - - - 0.943 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
84. SF3A3 ENSGALG00000001540 9664 0.942 - - - - - - 0.942 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
85. THOC2 ENSGALG00000008507 9501 0.941 - - - - - - 0.941 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
86. BTAF1 ENSGALG00000030598 3556 0.94 - - - - - - 0.940 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
87. DYNC1LI1 ENSGALG00000011491 11011 0.938 - - - - - - 0.938 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
88. HACE1 ENSGALG00000015415 1194 0.938 - - - - - - 0.938 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
89. NPHP3 ENSGALG00000034586 1465 0.938 - - - - - - 0.938 - - - nephrocystin 3, transcript variant X1
90. NRD1 NRD1 10827 0.937 - - - - - - 0.937 - - -
91. CAMKK2 ENSGALG00000040131 2795 0.937 - - - - - - 0.937 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
92. LMNB2 ENSGALG00000000470 4364 0.936 - - - - - - 0.936 - - - lamin B2 [Source:NCBI gene;Acc:396222]
93. COPE ENSGALG00000003153 19444 0.933 - - - - - - 0.933 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
94. TMEM108 ENSGALG00000036412 2903 0.933 - - - - - - 0.933 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
95. ENSGALG00000002923 ENSGALG00000002923 2233 0.932 - - - - - - 0.932 - - -
96. POPDC3 ENSGALG00000027420 700 0.93 - - - - - - 0.930 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
97. LAP3 ENSGALG00000006334 21076 0.93 - - - - - - 0.930 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
98. UBA3 ENSGALG00000013410 6923 0.93 - - - - - - 0.930 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
99. SLC1A1 ENSGALG00000010187 637 0.93 - - - - - - 0.930 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
100. SREBF2 ENSGALG00000041687 4519 0.929 - - - - - - 0.929 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]

There are 575 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA