Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDF2

Gene Name Gene ID Reads Annotation
SDF2 ENSGALG00000037709 12283 stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]











Genes with expression patterns similar to SDF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDF2 ENSGALG00000037709 12283 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
2. CAB39 ENSGALG00000027262 6779 1.702 - - - - - - 0.777 0.925 - - calcium binding protein 39 [Source:HGNC Symbol;Acc:HGNC:20292]
3. EIF2B2 ENSGALG00000010301 10772 1.57 - - - - - - 0.864 0.706 - - eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
4. BAG4 ENSGALG00000003254 5751 1.516 - - - - - - 0.802 0.714 - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
5. SALL1 ENSGALG00000039238 3740 1.469 - - - - - - 0.738 0.731 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
6. TMEM87A ENSGALG00000009018 8027 0.916 - - - - - - - 0.916 - - transmembrane protein 87A [Source:HGNC Symbol;Acc:HGNC:24522]
7. TRABD ENSGALG00000030705 6577 0.889 - - - - - - 0.889 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
8. WDR60 1631 0.887 - - - - - - - 0.887 - - WD repeat domain 60, transcript variant X4
9. NDUFS8 ENSGALG00000040173 24745 0.87 - - - - - - 0.870 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
10. USP47 ENSGALG00000005569 4813 0.866 - - - - - - 0.866 - - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
11. ADAR ENSGALG00000021475 6004 0.862 - - - - - - 0.862 - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
12. PITPNB ENSGALG00000005654 21578 0.86 - - - - - - 0.860 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
13. NUSAP1 ENSGALG00000008584 9955 0.858 - - - - - - 0.858 - - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
14. DPP9 ENSGALG00000004200 4515 0.855 - - - - - - 0.855 - - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
15. AATF ENSGALG00000005420 6501 0.852 - - - - - - 0.852 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
16. PWP1 ENSGALG00000012631 10536 0.852 - - - - - - 0.852 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
17. MRPS35 ENSGALG00000036730 6327 0.851 - - - - - - 0.851 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
18. RHOT1 ENSGALG00000003397 5149 0.851 - - - - - - 0.851 - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
19. ZC3H7A ENSGALG00000003143 7114 0.85 - - - - - - 0.850 - - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
20. RDM1 ENSGALG00000000243 3388 0.85 - - - - - - 0.850 - - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
21. GPX8 ENSGALG00000026704 4497 0.849 - - - - - - 0.849 - - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
22. DUT ENSGALG00000038032 34659 0.848 - - - - - - 0.848 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
23. COX16 ENSGALG00000020449 5959 0.848 - - - - - - 0.848 - - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
24. TXNDC12 ENSGALG00000010569 13822 0.845 - - - - - - 0.845 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
25. RPL22 ENSGALG00000000719 74238 0.843 - - - - - - 0.843 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
26. CEPT1 ENSGALG00000000142 4219 0.842 - - - - - - 0.842 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
27. SRI ENSGALG00000008985 13865 0.84 - - - - - - 0.840 - - - sorcin [Source:NCBI gene;Acc:420538]
28. XPR1 ENSGALG00000003893 5642 0.839 - - - - - - 0.839 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
29. ENSGALG00000000514 ENSGALG00000000514 9906 0.838 - - - - - - 0.838 - - -
30. NIPSNAP3L ENSGALG00000027334 7514 0.838 - - - - - - 0.838 - - - nipsnap homolog 3-like
31. FRZB ENSGALG00000002763 14833 0.836 - - - - - - 0.836 - - - frizzled related protein [Source:NCBI gene;Acc:395545]
32. ZMAT2 ENSGALG00000041746 23601 0.834 - - - - - - 0.834 - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
33. PIN4 ENSGALG00000003878 23523 0.834 - - - - - - 0.834 - - - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 [Source:HGNC Symbol;Acc:HGNC:8992]
34. USP5 ENSGALG00000014525 21883 0.834 - - - - - - 0.834 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
35. GARS ENSGALG00000005694 18264 0.833 - - - - - - 0.833 - - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
36. DJ-1 DJ-1 13462 0.832 - - - - - - 0.832 - - -
37. C C 7669 0.829 - - - - - - 0.829 - - -
38. CROT ENSGALG00000008813 8052 0.828 - - - - - - 0.828 - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
39. INTS6L ENSGALG00000006157 2303 0.828 - - - - - - 0.828 - - - integrator complex subunit 6 like, transcript variant X6
40. TMA16 ENSGALG00000009501 6651 0.828 - - - - - - 0.828 - - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
41. YIPF4 ENSGALG00000010547 4337 0.827 - - - - - - 0.827 - - - Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
42. NUTF2 ENSGALG00000001602 32832 0.824 - - - - - - 0.824 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
43. FGFR2 ENSGALG00000009495 15391 0.823 - - - - - - 0.823 - - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
44. SDHA ENSGALG00000013167 6509 0.822 - - - - - - 0.822 - - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
45. PAN3 ENSGALG00000017092 5387 0.822 - - - - - - - 0.822 - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
46. MTAP ENSGALG00000008174 10976 0.82 - - - - - - 0.820 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
47. PFKP ENSGALG00000006939 10149 0.82 - - - - - - 0.820 - - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
48. COX20 ENSGALG00000027440 5881 0.819 - - - - - - 0.819 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
49. ZNHIT6 ENSGALG00000008658 4383 0.819 - - - - - - 0.819 - - - zinc finger HIT-type containing 6 [Source:HGNC Symbol;Acc:HGNC:26089]
50. B4GALNT4 ENSGALG00000004250 2150 0.817 - - - - - - 0.817 - - - beta-1,4-N-acetyl-galactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]
51. SAR1A ENSGALG00000004431 28833 0.817 - - - - - - 0.817 - - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
52. TBPL1 ENSGALG00000013981 3710 0.817 - - - - - - 0.817 - - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
53. DNAJC9 ENSGALG00000002701 19249 0.816 - - - - - - 0.816 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
54. ETF1 ENSGALG00000002262 14560 0.812 - - - - - - - 0.812 - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
55. LUC7L2 ENSGALG00000036238 11817 0.812 - - - - - - 0.812 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
56. NDUFA1 ENSGALG00000008613 20410 0.811 - - - - - - 0.811 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
57. COMMD5 ENSGALG00000008867 12173 0.811 - - - - - - 0.811 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
58. ILK ENSGALG00000031642 11321 0.81 - - - - - - 0.810 - - - integrin linked kinase [Source:NCBI gene;Acc:374018]
59. WDR12 ENSGALG00000008470 7654 0.81 - - - - - - 0.810 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
60. TERF1 ENSGALG00000037453 4497 0.809 - - - - - - 0.809 - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
61. MT-ND4L MT-ND4L 12537 0.809 - - - - - - 0.809 - - -
62. COX11 ENSGALG00000027190 4475 0.809 - - - - - - 0.809 - - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
63. USP1 ENSGALG00000010957 8297 0.809 - - - - - - 0.809 - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
64. TACC3 ENSGALG00000015709 17336 0.809 - - - - - - 0.809 - - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
65. PSMC2 ENSGALG00000008236 25980 0.809 - - - - - - - 0.809 - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
66. MLLT10 ENSGALG00000007928 4022 0.808 - - - - - - 0.808 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
67. FOXK2 ENSGALG00000001577 6346 0.808 - - - - - - 0.808 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
68. RPN2 ENSGALG00000003815 18864 0.807 - - - - - - 0.807 - - - ribophorin II [Source:NCBI gene;Acc:419177]
69. PIAS4 ENSGALG00000034413 2865 0.805 - - - - - - 0.805 - - - protein inhibitor of activated STAT 4 [Source:HGNC Symbol;Acc:HGNC:17002]
70. DECR1 ENSGALG00000036990 6360 0.804 - - - - - - 0.804 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
71. PGD ENSGALG00000002797 15115 0.803 - - - - - - 0.803 - - - phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
72. NIFK ENSGALG00000011650 14990 0.803 - - - - - - 0.803 - - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
73. ARL5A ENSGALG00000041099 4592 0.803 - - - - - - 0.803 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
74. ELOVL1 ENSGALG00000009988 4000 0.803 - - - - - - - 0.803 - - ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
75. PDP1 ENSGALG00000034876 2965 0.802 - - - - - - 0.802 - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
76. BUD31 ENSGALG00000004705 19474 0.802 - - - - - - 0.802 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
77. ENSGALG00000006463 ENSGALG00000006463 45151 0.802 - - - - - - 0.802 - - -
78. MCM5 ENSGALG00000012546 18254 0.802 - - - - - - 0.802 - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
79. PPP1R7 ENSGALG00000031766 22187 0.801 - - - - - - 0.801 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
80. YIPF1 5945 0.8 - - - - - - 0.800 - - - Yip1 domain family member 1, transcript variant 4
81. TRDMT1 ENSGALG00000008686 2663 0.8 - - - - - - 0.800 - - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
82. ERLIN1 ENSGALG00000003308 6427 0.799 - - - - - - 0.799 - - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
83. CCDC53 CCDC53 3732 0.799 - - - - - - 0.799 - - -
84. PGRMC1 ENSGALG00000020260 19059 0.799 - - - - - - 0.799 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
85. ARFIP1 ENSGALG00000041361 7351 0.798 - - - - - - 0.798 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
86. TPP2 ENSGALG00000016865 7509 0.798 - - - - - - - 0.798 - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
87. SLC25A16 ENSGALG00000004065 2373 0.798 - - - - - - - 0.798 - - solute carrier family 25 member 16 [Source:HGNC Symbol;Acc:HGNC:10986]
88. ENSGALG00000007035 ENSGALG00000007035 8473 0.797 - - - - - - 0.797 - - -
89. STX8 ENSGALG00000001238 7403 0.797 - - - - - - 0.797 - - - syntaxin 8 [Source:NCBI gene;Acc:417321]
90. CAT ENSGALG00000030187 7534 0.797 - - - - - - 0.797 - - - catalase [Source:NCBI gene;Acc:423600]
91. ANAPC16 ENSGALG00000004410 18001 0.796 - - - - - - 0.796 - - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
92. ZC3H14 ENSGALG00000010622 7024 0.796 - - - - - - 0.796 - - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
93. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 0.794 - - - - - - 0.794 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
94. SERINC1 ENSGALG00000014868 12484 0.794 - - - - - - 0.794 - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
95. RALGPS1 ENSGALG00000000906 7207 0.793 - - - - - - 0.793 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
96. OAF ENSGALG00000006715 12518 0.793 - - - - - - - 0.793 - - out at first homolog [Source:NCBI gene;Acc:395161]
97. PPID ENSGALG00000009451 7529 0.793 - - - - - - 0.793 - - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
98. MRPS9 ENSGALG00000016794 5875 0.792 - - - - - - 0.792 - - - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
99. FAM136A ENSGALG00000042163 39487 0.792 - - - - - - 0.792 - - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
100. PDCD10 ENSGALG00000009477 7061 0.791 - - - - - - 0.791 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]

There are 287 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA