Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SDE2

Gene Name Gene ID Reads Annotation
SDE2 ENSGALG00000009253 739 SDE2 telomere maintenance homolog [Source:HGNC Symbol;Acc:HGNC:26643]











Genes with expression patterns similar to SDE2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SDE2 ENSGALG00000009253 739 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SDE2 telomere maintenance homolog [Source:HGNC Symbol;Acc:HGNC:26643]
2. PAFAH1B2 ENSGALG00000027918 418 1.476 - - - - - - - 0.723 0.753 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 [Source:NCBI gene;Acc:419765]
3. TM2D1 ENSGALG00000020614 764 0.878 - - - - - - - 0.878 - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
4. BLIMP-1 BLIMP-1 214 0.866 - - - - - - - 0.866 - -
5. UNC5B ENSGALG00000004569 1475 0.846 - - - - - - - - 0.846 - unc-5 netrin receptor B [Source:NCBI gene;Acc:423716]
6. GNA11 ENSGALG00000003238 732 0.844 - - - - - - - - 0.844 - G protein subunit alpha 11 [Source:NCBI gene;Acc:374077]
7. KIAA0556 ENSGALG00000043363 214 0.838 - - - - - - - 0.838 - - KIAA0556 [Source:HGNC Symbol;Acc:HGNC:29068]
8. SGMS1 ENSGALG00000003701 2459 0.836 - - - - - - - - 0.836 - sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
9. FAT4 ENSGALG00000011823 774 0.831 - - - - - - - 0.831 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
10. CDC2L1 CDC2L1 894 0.818 - - - - - - - 0.818 - -
11. KIAA1109 833 0.818 - - - - - - - - 0.818 - KIAA1109, transcript variant X11
12. LRRC16A LRRC16A 2041 0.811 - - - - - - - - 0.811 -
13. ZNF800 ENSGALG00000033997 415 0.808 - - - - - - - 0.808 - - zinc finger protein 800 [Source:NCBI gene;Acc:417747]
14. ACBD7 ENSGALG00000019663 2328 0.808 - - - - - - - 0.808 - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
15. ENSGALG00000009044 ENSGALG00000009044 14492 0.804 - - - - - - - - 0.804 -
16. AARS2 ENSGALG00000035337 1761 0.801 - - - - - - - - 0.801 - alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
17. SCAP ENSGALG00000035768 2511 0.796 - - - - - - - 0.796 - - SREBF chaperone [Source:HGNC Symbol;Acc:HGNC:30634]
18. LHFPL5 ENSGALG00000039170 247 0.796 - - - - - - - 0.796 - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
19. PSTPIP2 ENSGALG00000040136 37 0.793 - - - - - - - 0.793 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
20. KLHL20 ENSGALG00000036931 1789 0.793 - - - - - - - - 0.793 - kelch like family member 20 [Source:NCBI gene;Acc:425091]
21. PPP2CA_1 ENSGALG00000006462 3170 0.791 - - - - - - - 0.791 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
22. CUL3 ENSGALG00000005108 9571 0.789 - - - - - - - - 0.789 - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
23. DLL1 ENSGALG00000011182 1613 0.785 - - - - - - - 0.785 - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
24. TOR2A ENSGALG00000026424 1182 0.785 - - - - - - - 0.785 - - torsin family 2 member A [Source:HGNC Symbol;Acc:HGNC:11996]
25. SFI1 104 0.785 - - - - - - - 0.785 - - SFI1 centrin binding protein, transcript variant X6
26. PVALB1 PVALB1 267 0.784 - - - - - - - 0.784 - -
27. GCC2 ENSGALG00000016806 1085 0.782 - - - - - - - 0.782 - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
28. MCTP2 ENSGALG00000030157 579 0.781 - - - - - - - - 0.781 - multiple C2 and transmembrane domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25636]
29. CYTIP ENSGALG00000012545 25 0.78 - - - - - - - 0.780 - - cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
30. CCNY ENSGALG00000007076 3921 0.779 - - - - - - - - 0.779 - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
31. ENSGALG00000018499 ENSGALG00000018499 100 0.779 - - - - - - - 0.779 - -
32. DHX58 ENSGALG00000023821 15 0.778 - - - - - - - 0.778 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
33. CPB1 ENSGALG00000006834 25 0.778 - - - - - - - 0.778 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
34. TAGAP ENSGALG00000013747 34 0.778 - - - - - - - 0.778 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
35. UBE3C ENSGALG00000006461 57 0.778 - - - - - - - 0.778 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
36. KLF11 ENSGALG00000016440 65 0.778 - - - - - - - 0.778 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
37. gga-mir-454 ENSGALG00000033526 22 0.777 - - - - - - - 0.777 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
38. TNRC6C ENSGALG00000001725 215 0.776 - - - - - - - 0.776 - - trinucleotide repeat containing 6C [Source:HGNC Symbol;Acc:HGNC:29318]
39. TEAD4 ENSGALG00000014342 6123 0.776 - - - - - - - - 0.776 - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
40. IRF-4 IRF-4 19 0.773 - - - - - - - 0.773 - -
41. ZDHHC20 ENSGALG00000017126 58 0.771 - - - - - - - 0.771 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
42. SNX7 ENSGALG00000005478 4736 0.77 - - - - - - - - 0.770 - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
43. HMGXB3 ENSGALG00000005770 119 0.77 - - - - - - - 0.770 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
44. KCNG3 ENSGALG00000009919 243 0.769 - - - - - - - 0.769 - - potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
45. NSDHL ENSGALG00000007493 3126 0.767 - - - - - - - - 0.767 - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
46. C1orf216 ENSGALG00000002353 1886 0.766 - - - - - - - 0.766 - - chromosome 1 open reading frame 216 [Source:HGNC Symbol;Acc:HGNC:26800]
47. SACM1L ENSGALG00000040902 70 0.766 - - - - - - - 0.766 - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
48. SAMSN1 ENSGALG00000040926 88 0.764 - - - - - - - 0.764 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
49. gga-mir-125b gga-mir-125b 146 0.764 - - - - 0.764 - - - - -
50. ZFC3H1 ENSGALG00000010177 1326 0.762 - - - - - - - 0.762 - - zinc finger C3H1-type containing [Source:HGNC Symbol;Acc:HGNC:28328]
51. SERPINB6 ENSGALG00000012866 1582 0.762 - - - - - - - - 0.762 - serpin family B member 6 [Source:NCBI gene;Acc:420895]
52. GRPEL2 ENSGALG00000002673 105 0.762 - - - - - - - 0.762 - - GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
53. GINS1 ENSGALG00000008538 4786 0.761 - - - - - - - 0.761 - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
54. ZNF767 ENSGALG00000036870 933 0.758 - - - - - - - 0.758 - - zinc finger family member 767 [Source:NCBI gene;Acc:420372]
55. HAGH ENSGALG00000005398 168 0.758 - - - - - - - 0.758 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
56. TRMT12 ENSGALG00000006773 707 0.757 - - - - - - - 0.757 - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
57. FBXO22 ENSGALG00000039897 377 0.757 - - - - - - - 0.757 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
58. BPTF ENSGALG00000038222 7521 0.756 - - - - - - - - 0.756 - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
59. BTK ENSGALG00000004958 272 0.755 - - - - - - - 0.755 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
60. MDM1 ENSGALG00000009905 825 0.755 - - - - - - - 0.755 - - Mdm1 nuclear protein [Source:NCBI gene;Acc:417839]
61. RIPK1 ENSGALG00000012827 3405 0.754 - - - - - - - - 0.754 - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
62. CAPRIN1 ENSGALG00000013532 1699 0.754 - - - - - - - 0.754 - - cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
63. MSRA ENSGALG00000028032 2607 0.754 - - - - - - - - 0.754 - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
64. REV-ERBB REV-ERBB 331 0.753 - - - - 0.753 - - - - -
65. KIN ENSGALG00000030702 1608 0.752 - - - - - - - 0.752 - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
66. SMPD1 ENSGALG00000036106 2314 0.752 - - - - - - - 0.752 - - sphingomyelin phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:11120]
67. SH3GL1 ENSGALG00000001121 159 0.752 - - - - - - - 0.752 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
68. SENP7 ENSGALG00000044642 48 0.75 - - - - - - - 0.750 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
69. ALDH3A2 ENSGALG00000004763 3363 0.749 - - - - - - - - 0.749 - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
70. UBE2R2 ENSGALG00000001668 9234 0.749 - - - - - - - - 0.749 - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
71. DNAJA2 ENSGALG00000004115 1670 0.748 - - - - - - - 0.748 - - DnaJ heat shock protein family (Hsp40) member A2 [Source:NCBI gene;Acc:415744]
72. PARM1 ENSGALG00000010268 13 0.747 - - - - - - - 0.747 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
73. VIP ENSGALG00000013604 153 0.746 - - - - - - - 0.746 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
74. RAD54L2 ENSGALG00000003243 187 0.746 - - - - - - - - 0.746 - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
75. ANKZF1 ENSGALG00000011332 2247 0.746 - - - - - - - 0.746 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
76. DEPDC5 ENSGALG00000006766 1592 0.745 - - - - - - - 0.745 - - DEP domain containing 5, transcript variant X6
77. PDXK ENSGALG00000016205 26 0.745 - - - - - - - 0.745 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
78. SERINC2 ENSGALG00000021685 1581 0.742 - - - - - - - 0.742 - - serine incorporator 2 [Source:NCBI gene;Acc:419558]
79. IL11RA ENSGALG00000005848 1242 0.742 - - - - - - - - 0.742 - interleukin 11 receptor subunit alpha [Source:NCBI gene;Acc:693251]
80. BSDC1 ENSGALG00000003405 3701 0.741 - - - - - - - - 0.741 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
81. NRDE2 ENSGALG00000010677 3453 0.74 - - - - - - - - 0.740 - NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]
82. GJC1 ENSGALG00000000997 2279 0.738 - - - - - - - 0.738 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
83. XKR6 ENSGALG00000016646 326 0.738 - - - - - - - - 0.738 - XK related 6 [Source:HGNC Symbol;Acc:HGNC:27806]
84. MGEA5 116 0.738 - - - - - - - 0.738 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
85. PCASP2 ENSGALG00000027961 42 0.738 - - - - - - - 0.738 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
86. PLXND1 ENSGALG00000008473 21 0.737 - - - - - - - 0.737 - - plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
87. UTP6 ENSGALG00000003260 4909 0.737 - - - - - - - - 0.737 - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
88. PDE10A ENSGALG00000011537 642 0.736 - - - - - - - 0.736 - - phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
89. NOX4 ENSGALG00000017235 67 0.736 - - - - - - - - 0.736 - NADPH oxidase 4 [Source:NCBI gene;Acc:419012]
90. ZBTB34 ENSGALG00000023407 198 0.734 - - - - - - - 0.734 - - zinc finger and BTB domain containing 34 [Source:NCBI gene;Acc:417090]
91. ANKRD26 ENSGALG00000009104 71 0.734 - - - - - - - 0.734 - - ankyrin repeat domain 26 [Source:NCBI gene;Acc:417764]
92. SGSM3 ENSGALG00000012033 1839 0.734 - - - - - - - - 0.734 - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
93. SNTA1 ENSGALG00000029694 3177 0.733 - - - - - - - - 0.733 - syntrophin alpha 1 [Source:HGNC Symbol;Acc:HGNC:11167]
94. KPNA3 ENSGALG00000017009 17330 0.733 - - - - - - - - 0.733 - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
95. JMY ENSGALG00000014819 46 0.733 - - - - - - - - 0.733 - junction mediating and regulatory protein, p53 cofactor [Source:HGNC Symbol;Acc:HGNC:28916]
96. SLC6A2 ENSGALG00000003560 108 0.731 - - - - - - - 0.731 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
97. GPT2 ENSGALG00000033338 1054 0.731 - - - - - - - 0.731 - - glutamic--pyruvic transaminase 2 [Source:HGNC Symbol;Acc:HGNC:18062]
98. EPC1 ENSGALG00000007169 101 0.73 - - - - - - - 0.730 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
99. STYXL1 ENSGALG00000001963 327 0.73 - - - - - - - - 0.730 - serine/threonine/tyrosine interacting like 1
100. CEP68 ENSGALG00000008787 1591 0.73 - - - - - - - - 0.730 - centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]

There are 43 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA