Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCUBE3

Gene Name Gene ID Reads Annotation
SCUBE3 ENSGALG00000002675 12 signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]











Genes with expression patterns similar to SCUBE3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCUBE3 ENSGALG00000002675 12 5 - - 1.000 - - 1.000 1.000 1.000 - 1.000 signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
2. CBLN4 ENSGALG00000030821 9 1.557 - - - - - - 0.839 - - 0.718 cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
3. TMEM200B ENSGALG00000024318 117 1.497 - - 0.721 - - 0.776 - - - - transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
4. GPRC5B ENSGALG00000002028 28 1.446 - - 0.705 - - - 0.741 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
5. HBEGF ENSGALG00000000949 15 1 - - 1.000 - - - - - - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
6. SHOX2 ENSGALG00000039728 2 1 - - 1.000 - - - - - - - short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]
7. BAI1 BAI1 235 1 - - - - - - - 1.000 - -
8. CCDC177 ENSGALG00000026215 10 1 - - - - - - 1.000 - - - coiled-coil domain containing 177
9. NCF2 ENSGALG00000004700 9 1 - - 1.000 - - - - - - - neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]
10. TDH ENSGALG00000016651 3 1 - - 1.000 - - - - - - - L-threonine dehydrogenase (pseudogene)
11. GFI1 ENSGALG00000043650 2 1 - - 1.000 - - - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
12. ANO10 ENSGALG00000042371 2 1 - - 1.000 - - - - - - - anoctamin 10 [Source:HGNC Symbol;Acc:HGNC:25519]
13. ENSGALG00000012435 ENSGALG00000012435 3 1 - - 1.000 - - - - - - -
14. CTDSP1 ENSGALG00000027768 2 1 - - 1.000 - - - - - - - CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
15. RCAN2 ENSGALG00000016709 8 1 - - 1.000 - - - - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
16. CDC42EP3 ENSGALG00000010551 15 1 - - 1.000 - - - - - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
17. CHIA ENSGALG00000023760 1 1 - - 1.000 - - - - - - - chitinase, acidic [Source:NCBI gene;Acc:395072]
18. RUFY4 2 1 - - 1.000 - - - - - - - RUN and FYVE domain containing 4, transcript variant X5
19. ENSGALG00000007032 ENSGALG00000007032 1 1 - - 1.000 - - - - - - -
20. SNORD47 SNORD47 61 1 - - 1.000 - - - - - - -
21. ETNK1 ENSGALG00000013205 18 0.988 - - 0.988 - - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
22. CCNA1 ENSGALG00000017052 23 0.981 - - - - - - - 0.981 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
23. POMGNT1 ENSGALG00000010351 3 0.971 - - - - - - - 0.971 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
24. PACRG ENSGALG00000011560 67 0.971 - - - - - - - 0.971 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
25. ENSGALG00000027203 ENSGALG00000027203 2 0.971 - - - - - - - 0.971 - -
26. TTC29 ENSGALG00000010009 4 0.971 - - - - - - - 0.971 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
27. RUNX1 ENSGALG00000016022 2 0.971 - - - - - - - 0.971 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
28. ENSGALG00000014888 ENSGALG00000014888 3 0.971 - - - - - - - 0.971 - -
29. ADPRH ENSGALG00000015473 7 0.971 - - - - - - - 0.971 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
30. GUCY1B3 29 0.971 - - - - - - - 0.971 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
31. PGF ENSGALG00000026557 33 0.97 - - - - - - - 0.970 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
32. FRMPD3 ENSGALG00000028975 3 0.97 - - - - - - - 0.970 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
33. DENND2A ENSGALG00000012857 350 0.97 - - - - - - - 0.970 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
34. NRG3 ENSGALG00000042812 10 0.97 - - - - - - - 0.970 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
35. BDKRB2 ENSGALG00000011080 12 0.967 - - - - - - - 0.967 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
36. TSPAN10 ENSGALG00000004525 6 0.966 - - - - - - - 0.966 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
37. SERGEF ENSGALG00000006231 35 0.956 - - - - - - - 0.956 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
38. EXOC6 ENSGALG00000006763 119 0.955 - - - - - - - 0.955 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
39. BAI2 BAI2 11 0.952 - - 0.952 - - - - - - -
40. C12orf50 ENSGALG00000045093 9 0.952 - - - - - - - 0.952 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
41. CLCNKB ENSGALG00000003713 27 0.949 - - 0.949 - - - - - - - chloride voltage-gated channel Kb, transcript variant X3
42. NRROS 72 0.948 - - - - - - - 0.948 - - negative regulator of reactive oxygen species, transcript variant X2
43. HBP1 ENSGALG00000008050 19 0.948 - - - - - - - - - 0.948 HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
44. TTC25 ENSGALG00000003464 70 0.942 - - - - - - - 0.942 - - tetratricopeptide repeat domain 25
45. IGFBP2 ENSGALG00000011469 26 0.942 - - - - - - - 0.942 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
46. ENSGALG00000008594 ENSGALG00000008594 54 0.941 - - - - - - - 0.941 - -
47. UBAP1 ENSGALG00000021378 11 0.938 - - - - - - - 0.938 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
48. SS2 ENSGALG00000003034 277 0.937 - - - - - - - 0.937 - - somatostatin II [Source:NCBI gene;Acc:395106]
49. ENSGALG00000019793 ENSGALG00000019793 198 0.927 - - - - - - - 0.927 - -
50. PTPRR ENSGALG00000010148 93 0.922 - - - - - - - 0.922 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
51. ZFYVE20 ZFYVE20 132 0.914 - - - - - - - 0.914 - -
52. STAM2 ENSGALG00000012513 9 0.911 - - 0.911 - - - - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
53. RANBP3L 19 0.906 - - 0.906 - - - - - - - RAN binding protein 3 like, transcript variant X2
54. ENSGALG00000000193 ENSGALG00000000193 19 0.898 - - - - - - - 0.898 - -
55. FETUB ENSGALG00000008608 38 0.897 - - - - - 0.897 - - - - fetuin B [Source:NCBI gene;Acc:395404]
56. C9orf96 C9orf96 43 0.893 - - - - - - - 0.893 - -
57. P2RY12 ENSGALG00000036470 20 0.891 - - - - - - - 0.891 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
58. GRIA2 ENSGALG00000009405 275 0.889 - - - - - - - 0.889 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
59. SLC6A17 ENSGALG00000000394 10 0.888 - - 0.888 - - - - - - - solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
60. WDR19 ENSGALG00000014064 49 0.883 - - - - - - - 0.883 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
61. ZNF827 ENSGALG00000009982 7 0.88 - - 0.880 - - - - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
62. LOC422926 ENSGALG00000027090 16 0.879 - - 0.879 - - - - - - - uncharacterized LOC422926
63. LRRC7 ENSGALG00000011284 13 0.879 - - 0.879 - - - - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
64. EEF2K ENSGALG00000006982 12 0.872 - - - - - - - - - 0.872 eukaryotic elongation factor 2 kinase [Source:HGNC Symbol;Acc:HGNC:24615]
65. PPP1R16B ENSGALG00000003568 25 0.87 - - 0.870 - - - - - - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
66. MAP3K2 42 0.867 - - - - - 0.867 - - - - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
67. TEC ENSGALG00000014124 70 0.862 - - - - - - 0.862 - - - tec protein tyrosine kinase [Source:NCBI gene;Acc:396407]
68. ENSGALG00000019568 ENSGALG00000019568 25 0.862 - - - - - 0.862 - - - -
69. KIF5C ENSGALG00000012462 167 0.859 - - - - - - - 0.859 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
70. LRRK2 ENSGALG00000007161 66 0.859 - - - - - - - 0.859 - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
71. COL15A1 ENSGALG00000034119 9 0.859 - - 0.859 - - - - - - - collagen type XV alpha 1 chain, transcript variant X6
72. TSC2 ENSGALG00000005646 489 0.858 - - - - - - - 0.858 - - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
73. CPO ENSGALG00000008516 3 0.853 - - 0.853 - - - - - - - carboxypeptidase O [Source:HGNC Symbol;Acc:HGNC:21011]
74. TRERF1 ENSGALG00000009896 42 0.847 - - 0.847 - - - - - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
75. LOC428714 ENSGALG00000007530 41 0.846 - - - - - - - 0.846 - - LOC428714, transcript variant X2
76. TUBE1 ENSGALG00000015017 39 0.846 - - 0.846 - - - - - - - tubulin epsilon 1, transcript variant X1
77. SLC4A10 ENSGALG00000030032 56 0.843 - - - - - - - 0.843 - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
78. EPHX1 ENSGALG00000009291 46 0.842 - - - - - - - 0.842 - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
79. TCP11 ENSGALG00000002692 11 0.842 - - - - - - - 0.842 - - t-complex 11, transcript variant X3
80. ABCG2 ENSGALG00000030677 88 0.84 - - - - - - - 0.840 - - Gallus gallus ATP binding cassette subfamily G member 2 (Junior blood group) (ABCG2), mRNA. [Source:RefSeq mRNA;Acc:NM_001328490]
81. GABRG4 GABRG4 16 0.839 - - 0.839 - - - - - - -
82. P2RY13 ENSGALG00000039432 16 0.839 - - - - - - 0.839 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
83. LZTS2 ENSGALG00000023612 9 0.839 - - - - - - 0.839 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
84. COL4A3BP ENSGALG00000014952 96 0.839 - - - - - - 0.839 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
85. FOXP1 127 0.839 - - - - - - 0.839 - - - forkhead box P1, transcript variant X14
86. HPS3 ENSGALG00000040089 44 0.839 - - - - - - 0.839 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
87. FGF13 ENSGALG00000006508 8 0.839 - - - - - - 0.839 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
88. SNORD79 SNORD79 12 0.839 - - - - - - 0.839 - - -
89. ENSGALG00000010218 ENSGALG00000010218 12 0.839 - - - - - - 0.839 - - -
90. RD RD 99 0.839 - - - - - - 0.839 - - -
91. MMP13 ENSGALG00000017183 7 0.839 - - - - - - 0.839 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
92. EGR4 ENSGALG00000016086 4 0.839 - - - - - - 0.839 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
93. POLR1A ENSGALG00000038160 236 0.839 - - - - - - 0.839 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
94. SPERT ENSGALG00000016981 145 0.839 - - - - - - 0.839 - - - spermatid associated [Source:NCBI gene;Acc:418848]
95. PLA2G1BL ENSGALG00000007236 4 0.839 - - - - - - 0.839 - - - phospholipase A2, major isoenzyme-like
96. FGA ENSGALG00000009266 291 0.839 - - - - - - 0.839 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
97. ADAM23 ENSGALG00000008582 28 0.839 - - - - - - 0.839 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
98. KCNV1 ENSGALG00000031449 64 0.839 - - - - - - 0.839 - - - potassium voltage-gated channel modifier subfamily V member 1
99. DIRAS2 ENSGALG00000005323 11 0.839 - - - - - - 0.839 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
100. GLRA2 ENSGALG00000016571 10 0.839 - - - - - - 0.839 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA