Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCUBE1

Gene Name Gene ID Reads Annotation
SCUBE1 ENSGALG00000014178 91 signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4











Genes with expression patterns similar to SCUBE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCUBE1 ENSGALG00000014178 91 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
2. gga-mir-99a ENSGALG00000018242 192 1.722 - - 0.755 - 0.967 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
3. LOC100857745 ENSGALG00000027114 118 1.72 - - 0.849 - 0.871 - - - - - collagen alpha-1(I) chain-like
4. MYO7A ENSGALG00000031450 16 1.499 - - 0.776 - - 0.723 - - - - myosin VIIA [Source:HGNC Symbol;Acc:HGNC:7606]
5. HBE1 ENSGALG00000028273 189 1.494 - - 0.771 - - 0.723 - - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
6. PRPS2 ENSGALG00000016592 165 1.435 - - 0.712 - - 0.723 - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
7. METTL24 ENSGALG00000041120 60 0.999 - - - - - - 0.999 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
8. MXRA5 ENSGALG00000016635 352 0.999 - - - - - - 0.999 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
9. GRB14 ENSGALG00000020703 42 0.999 - - - - - - 0.999 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
10. ENSGALG00000026925 ENSGALG00000026925 119 0.999 - - - - - - 0.999 - - -
11. HEMK1 ENSGALG00000002253 40 0.999 - - - - - - 0.999 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
12. TCTE1 ENSGALG00000010165 65 0.999 - - - - - - 0.999 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
13. ENSGALG00000003619 ENSGALG00000003619 58 0.997 - - - - - - 0.997 - - -
14. PTN ENSGALG00000040493 864 0.996 - - - - - - 0.996 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
15. ENSGALG00000016099 ENSGALG00000016099 138 0.995 - - - - - - 0.995 - - -
16. SNORA31 SNORA31 183 0.994 - - - - - - 0.994 - - -
17. POMGNT2 ENSGALG00000011518 36 0.993 - - - - - - - 0.993 - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
18. FAM183A 242 0.989 - - - - - - 0.989 - - - family with sequence similarity 183 member A, transcript variant 2
19. NSRP1 ENSGALG00000004186 1683 0.988 - - - - - - 0.988 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
20. ENTPD8L ENSGALG00000008936 731 0.988 - - - - - - 0.988 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
21. PIK3R3 ENSGALG00000010335 374 0.987 - - - - - - 0.987 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
22. WDSUB1 ENSGALG00000012574 2038 0.987 - - - - - - 0.987 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
23. DNAJC16 ENSGALG00000032832 750 0.985 - - - - - - 0.985 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
24. MESDC1 1013 0.984 - - - - - - 0.984 - - - mesoderm development candidate 1
25. UPK3BL ENSGALG00000001885 1650 0.981 - - - - - - 0.981 - - - uroplakin 3B-like
26. HESX1 ENSGALG00000005506 203 0.981 - - - - - - 0.981 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
27. ENSGALG00000013233 ENSGALG00000013233 3265 0.979 - - - - - - 0.979 - - -
28. PLCE1 ENSGALG00000039528 151 0.979 - - - - - - 0.979 - - - phospholipase C epsilon 1
29. SLC25A21 ENSGALG00000010117 536 0.977 - - - - - - 0.977 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
30. GAS6 ENSGALG00000016820 481 0.972 - - - - - - 0.972 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
31. CEP290 ENSGALG00000011177 1559 0.971 - - - - - - 0.971 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
32. THRB ENSGALG00000011294 7 0.967 - - - - 0.967 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
33. IL22RA1 ENSGALG00000004221 71 0.967 - - - - 0.967 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
34. TRIM14 ENSGALG00000015315 22 0.967 - - - - 0.967 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
35. PRKAR2B ENSGALG00000008060 40 0.967 - - - - 0.967 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
36. SLCO1B1 ENSGALG00000019276 7 0.962 - - - - 0.962 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
37. ZNFX1 ENSGALG00000004859 33 0.962 - - - - 0.962 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
38. LFNG ENSGALG00000038515 5178 0.961 - - - - - - 0.961 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
39. TUBA4A ENSGALG00000000433 1367 0.96 - - - - - - 0.960 - - - tubulin alpha 4a
40. SGSM3 ENSGALG00000012033 1839 0.96 - - - - - - 0.960 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
41. C14orf80 C14orf80 1921 0.958 - - - - - - 0.958 - - -
42. MBNL2 ENSGALG00000016890 3162 0.958 - - - - - - 0.958 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
43. RAB1A ENSGALG00000031582 6929 0.958 - - - - - - 0.958 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
44. ZNF142 ENSGALG00000011393 2078 0.956 - - - - - - 0.956 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
45. TM9SF4 ENSGALG00000006568 567 0.956 - - - - - - 0.956 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
46. SPNS3 ENSGALG00000001410 173 0.956 - - - - - - - 0.956 - - sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]
47. TAB3 ENSGALG00000016284 40 0.956 - - - - - - - 0.956 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
48. MST1 ENSGALG00000002722 994 0.955 - - - - - - 0.955 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
49. XPO7 ENSGALG00000001838 1875 0.955 - - - - - - 0.955 - - - exportin 7 [Source:NCBI gene;Acc:426925]
50. UBE3B ENSGALG00000013851 1672 0.955 - - - - - - 0.955 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
51. FAM57A ENSGALG00000004820 1492 0.955 - - - - - - 0.955 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
52. ZFYVE19 ENSGALG00000008460 2750 0.954 - - - - - - 0.954 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
53. ENSGALG00000028164 ENSGALG00000028164 3325 0.953 - - - - - - 0.953 - - -
54. TM2D3 ENSGALG00000026271 2566 0.953 - - - - - - 0.953 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
55. KANK4 ENSGALG00000010953 726 0.953 - - - - - - 0.953 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
56. ENSGALG00000027427 ENSGALG00000027427 16 0.952 - - - - 0.952 - - - - -
57. RAB37 ENSGALG00000027789 17 0.951 - - - - 0.951 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
58. PKN3 532 0.95 - - - - - - 0.950 - - - protein kinase N3, transcript variant X2
59. NDUFV3 ENSGALG00000022813 4456 0.949 - - - - - - 0.949 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
60. SDK2 ENSGALG00000031895 2682 0.949 - - - - - - 0.949 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
61. NUP205 ENSGALG00000011662 4157 0.948 - - - - - - 0.948 - - - nucleoporin 205
62. TPR ENSGALG00000005105 2924 0.947 - - - - - - 0.947 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
63. NCAPG2 ENSGALG00000006525 2319 0.946 - - - - - - 0.946 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
64. SCAF4 ENSGALG00000033965 2027 0.945 - - - - - - 0.945 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
65. MGLL ENSGALG00000032736 612 0.945 - - - - - - 0.945 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
66. SUGP1 ENSGALG00000042132 2771 0.945 - - - - - - 0.945 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
67. BPHL ENSGALG00000029659 501 0.944 - - - - - - 0.944 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
68. MALSU1 ENSGALG00000010954 51 0.943 - - - - 0.943 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
69. CCNL1 ENSGALG00000009699 1033 0.94 - - - - - - 0.940 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
70. FAM193A ENSGALG00000015667 3075 0.939 - - - - - - 0.939 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
71. PGAP2 ENSGALG00000027762 2583 0.937 - - - - - - 0.937 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
72. SPG11 ENSGALG00000008180 1890 0.936 - - - - - - 0.936 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
73. CEP170B ENSGALG00000011639 71 0.934 - - - - 0.934 - - - - - centrosomal protein 170B, transcript variant X13
74. NT5C2 ENSGALG00000008179 1760 0.934 - - - - - - 0.934 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
75. ENSGALG00000020616 ENSGALG00000020616 3 0.932 - - - - - - - 0.932 - -
76. LRRC34 ENSGALG00000009402 3 0.932 - - - - - - - 0.932 - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
77. ENSGALG00000005344 ENSGALG00000005344 6 0.932 - - - - - - - 0.932 - -
78. ALPI ENSGALG00000023866 19 0.932 - - - - - - - 0.932 - - alkaline phosphatase, intestinal, transcript variant X2
79. CMC4 ENSGALG00000023937 15 0.932 - - - - - - - 0.932 - - C-X9-C motif containing 4 [Source:HGNC Symbol;Acc:HGNC:35428]
80. ZNF814 ZNF814 13 0.932 - - - - - - - 0.932 - -
81. ENSGALG00000023475 ENSGALG00000023475 19 0.932 - - - - - - - 0.932 - -
82. STEAP4 ENSGALG00000008997 8 0.932 - - - - - - - 0.932 - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
83. ATHL1 ATHL1 16 0.932 - - - - - - - 0.932 - -
84. ADSSL1 ENSGALG00000011618 85 0.932 - - - - - - - 0.932 - - adenylosuccinate synthase like 1 [Source:HGNC Symbol;Acc:HGNC:20093]
85. RGR ENSGALG00000002299 17 0.932 - - - - - - - 0.932 - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
86. SH3BP5 ENSGALG00000039337 17 0.932 - - - - - - - 0.932 - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
87. SESN3 ENSGALG00000017204 7 0.932 - - - - - - - 0.932 - - sestrin 3, transcript variant X2
88. ENSGALG00000024306 ENSGALG00000024306 0 0.932 - - - - - - - 0.932 - -
89. gga-mir-1801 ENSGALG00000025241 13 0.932 - - - - - - - 0.932 - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
90. TTC7B ENSGALG00000010680 4 0.932 - - - - - - - 0.932 - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
91. CIB3 ENSGALG00000003978 2 0.932 - - - - - - - 0.932 - - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
92. LNX1 ENSGALG00000013940 2 0.932 - - - - - - - 0.932 - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
93. ENSGALG00000026668 ENSGALG00000026668 34 0.932 - - - - - - - 0.932 - -
94. ENSGALG00000001483 ENSGALG00000001483 215 0.932 - - - - - - - 0.932 - -
95. TNN ENSGALG00000004538 21 0.932 - - - - - - - 0.932 - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
96. FBXO43 ENSGALG00000038940 7 0.932 - - - - - - - 0.932 - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
97. SNX18 ENSGALG00000014914 7 0.932 - - - - - - - 0.932 - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
98. PRLL ENSGALG00000009603 30 0.932 - - - - - - - 0.932 - - prolactin-like protein [Source:NCBI gene;Acc:417800]
99. ENSGALG00000007003 ENSGALG00000007003 2 0.932 - - - - - - - 0.932 - -
100. PARD3B ENSGALG00000042645 2893 0.931 - - - - - - 0.931 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]

There are 328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA