Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCT

Gene Name Gene ID Reads Annotation
SCT ENSGALG00000034822, ENSGALG00000037020 14 secretin, transcript variant X6











Genes with expression patterns similar to SCT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCT ENSGALG00000034822, ENSGALG00000037020 14 3 - - - 1.000 1.000 - - - - 1.000 secretin, transcript variant X6
2. DNAH7 ENSGALG00000007841 32 1.694 - - - 0.724 - - - - - 0.970 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
3. gga-mir-6585 ENSGALG00000027202 102 1.618 - - - 0.840 - - - - - 0.778 gga-mir-6585 [Source:miRBase;Acc:MI0022405]
4. SH2D4B ENSGALG00000002370 10 1.541 - - - 0.712 0.829 - - - - - SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
5. ARF1 ENSGALG00000005393 364 1.498 - - - - 0.764 - - - - 0.734 ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
6. IRF8 ENSGALG00000005757 5 1 - - - 1.000 - - - - - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
7. AMH ENSGALG00000036346 16 1 - - - 1.000 - - - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
8. TNNI3K ENSGALG00000011353 10 1 - - - 1.000 - - - - - - TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
9. GPR123 GPR123 3 1 - - - 1.000 - - - - - -
10. ENSGALG00000028102 ENSGALG00000028102 8 1 - - - 1.000 - - - - - -
11. EAF1 ENSGALG00000033379 3 1 - - - 1.000 - - - - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
12. CA7 ENSGALG00000033720 1 1 - - - 1.000 - - - - - - carbonic anhydrase 7 [Source:HGNC Symbol;Acc:HGNC:1381]
13. DLST ENSGALG00000010286 19 1 - - - 1.000 - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
14. CHST8 ENSGALG00000004903 16 1 - - - - - - - - - 1.000 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
15. ADORA3 ENSGALG00000001462 1 1 - - - 1.000 - - - - - - adenosine A3 receptor [Source:NCBI gene;Acc:373956]
16. TBX4 ENSGALG00000005285 3 1 - - - 1.000 - - - - - - T-box 4 [Source:NCBI gene;Acc:373989]
17. SLC5A9 ENSGALG00000010494 1 1 - - - 1.000 - - - - - - solute carrier family 5 member 9 [Source:HGNC Symbol;Acc:HGNC:22146]
18. KLHL12 ENSGALG00000000518 5 1 - - - 1.000 - - - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
19. NCX1 NCX1 9 1 - - - - - - - - - 1.000
20. NOX3 ENSGALG00000013659 4 1 - - - - - - - - - 1.000 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
21. ENSGALG00000002367 ENSGALG00000002367 10 1 - - - 1.000 - - - - - -
22. RS1 ENSGALG00000016523 11 1 - - - 1.000 - - - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
23. ENSGALG00000012920 ENSGALG00000012920 8 1 - - - - - - - - - 1.000
24. COL10A1 ENSGALG00000014965 1 1 - - - 1.000 - - - - - - collagen, type X, alpha 1, transcript variant X1
25. ROS1 ENSGALG00000014913 7 1 - - - - - - - - - 1.000 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
26. ENSGALG00000014720 ENSGALG00000014720 1 1 - - - 1.000 - - - - - -
27. IFNG ENSGALG00000009903 5 1 - - - - - - - - - 1.000 interferon gamma [Source:NCBI gene;Acc:396054]
28. ENSGALG00000029149 ENSGALG00000029149 7 1 - - - 1.000 - - - - - -
29. KIAA0319 ENSGALG00000041273 10 1 - - - 1.000 - - - - - - KIAA0319 [Source:HGNC Symbol;Acc:HGNC:21580]
30. C2 ENSGALG00000035721 5 1 - - - - - - - - - 1.000 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
31. BARX1 ENSGALG00000035557 2 1 - - - 1.000 - - - - - - BARX homeobox 1 [Source:NCBI gene;Acc:374017]
32. MUC4 4 1 - - - - - - - - - 1.000 mucin 4, cell surface associated, transcript variant X5
33. GPR12 ENSGALG00000017102 4 1 - - - - - - - - - 1.000 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
34. CHRNA6 ENSGALG00000015382 31 1 - - - 1.000 - - - - - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
35. SLC4A2 ENSGALG00000034284 3 1 - - - 1.000 - - - - - - solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
36. ENSGALG00000024489 ENSGALG00000024489 1 1 - - - 1.000 - - - - - -
37. STOML3 ENSGALG00000017039 6 0.997 - - - - - - - - - 0.997 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
38. CFH ENSGALG00000002431 31 0.997 - - - - - - - - - 0.997 complement factor H, transcript variant X1
39. CSF3 ENSGALG00000030907 11 0.997 - - - - - - - - - 0.997 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
40. DENND1B ENSGALG00000002246 6 0.993 - - - - - - - - - 0.993 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
41. CCR5 ENSGALG00000037077 23 0.993 - - - - - - - - - 0.993 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
42. gga-mir-1600 ENSGALG00000025438 248 0.988 - - - - - - - - - 0.988 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
43. LHX9 ENSGALG00000002223 12 0.985 - - - - - - - - - 0.985 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
44. ISPD ENSGALG00000010795 7 0.984 - - - - - - - - - 0.984 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
45. LOC100858777 ENSGALG00000027624 58 0.984 - - - - - - - - - 0.984 rhodopsin, GQ-coupled-like
46. ZNF770 ENSGALG00000009817 27 0.983 - - - - - - - - - 0.983 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
47. SERPINE3 ENSGALG00000017017 32 0.98 - - - - - - - - - 0.980 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
48. ZC3H7B ENSGALG00000011965 6 0.98 - - - - - - - - - 0.980 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
49. SPINK4 ENSGALG00000043964 50 0.975 - - - - - - - - - 0.975 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
50. CPNE7 ENSGALG00000000507 54 0.972 - - - - - - - - - 0.972 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
51. ECSCR ENSGALG00000024379 313 0.97 - - - - - - - - - 0.970 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
52. SUB1L1 ENSGALG00000027147 73 0.97 - - - - - - - - - 0.970 SUB1 homolog (S. cerevisiae)-like 1
53. ADAMTS5 ENSGALG00000015795 6 0.967 - - - - - - - - - 0.967 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
54. ENSGALG00000001629 ENSGALG00000001629 31 0.967 - - - - - - - - - 0.967
55. TTC9 ENSGALG00000017652 16 0.967 - - - - - - - - - 0.967 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
56. ESM1 ENSGALG00000027707 328 0.966 - - - - - - - - - 0.966 endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
57. PPTC7 ENSGALG00000004550 154 0.963 - - - - - - - - - 0.963 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
58. PLIN3 ENSGALG00000044632 370 0.961 - - - - - - - - - 0.961 perilipin 3, transcript variant X2
59. CTNNA3 ENSGALG00000002845 127 0.959 - - - - - - - - - 0.959 catenin alpha 3 [Source:NCBI gene;Acc:423648]
60. SDSL ENSGALG00000008317 55 0.957 - - - - - - - - - 0.957 serine dehydratase like [Source:NCBI gene;Acc:417030]
61. LRRC3B ENSGALG00000011314 26 0.955 - - - - - - - - - 0.955 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
62. AQP1 ENSGALG00000005209 111 0.955 - - - - - - - - - 0.955 aquaporin 1 [Source:NCBI gene;Acc:420384]
63. MISP 52 0.954 - - - - - - - - - 0.954 mitotic spindle positioning, transcript variant X2
64. LRRC49 ENSGALG00000004059 29 0.952 - - - - - - - - - 0.952 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
65. RBBP6_1 ENSGALG00000006043 26 0.945 - - - - - - - - - 0.945 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
66. RGS6 ENSGALG00000009368 19 0.945 - - - - - - - - - 0.945 regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
67. SNAPC1 ENSGALG00000011868 65 0.944 - - - - - - - - - 0.944 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
68. MMEL1 ENSGALG00000001115 46 0.943 - - - - - - - - - 0.943 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
69. TERF2IP ENSGALG00000000903 41 0.943 - - - - - - - - - 0.943 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
70. AK5 ENSGALG00000031652 12 0.929 - - - - - - - - - 0.929 adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
71. SPINK5 SPINK5 195 0.928 - - - - - - - - - 0.928
72. ATXN7L1 ENSGALG00000008115 84 0.922 - - - - - - - - - 0.922 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
73. FAM173A ENSGALG00000021364 4 0.915 - - - 0.915 - - - - - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
74. ZDHHC16 ENSGALG00000007592 19 0.915 - - - 0.915 - - - - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
75. SERINC4 ENSGALG00000042029 21 0.915 - - - 0.915 - - - - - - serine incorporator 4 [Source:HGNC Symbol;Acc:HGNC:32237]
76. C4orf33 ENSGALG00000010108 4 0.915 - - - 0.915 - - - - - - chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:27025]
77. PTPRZ1_1 ENSGALG00000040114 30 0.913 - - - 0.913 - - - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
78. ENSGALG00000023119 ENSGALG00000023119 156 0.906 - - - - - - - - - 0.906
79. ENSGALG00000026371 ENSGALG00000026371 106 0.903 - - - - - - - - - 0.903
80. STAB2 32 0.9 - - - - - - - - - 0.900 stabilin 2
81. CCDC112 ENSGALG00000045092 38 0.895 - - - - - - - - - 0.895 coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
82. SERTAD4 ENSGALG00000026359 400 0.887 - - - - - - - - - 0.887 SERTA domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25236]
83. XRCC4 ENSGALG00000015620 28 0.883 - - - - - - - - - 0.883 X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
84. HACD4 ENSGALG00000028142 395 0.881 - - - - - - - - - 0.881 3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
85. ZNF22 ZNF22 25 0.874 - - - - - - - - - 0.874
86. ADH6 ENSGALG00000020160 29 0.874 - - - - - - - - - 0.874 alcohol dehydrogenase 6 (class V) [Source:NCBI gene;Acc:395979]
87. CD93 ENSGALG00000008359 235 0.874 - - - - - - - - - 0.874 CD93 molecule [Source:NCBI gene;Acc:421234]
88. TCIRG1 ENSGALG00000036069 1117 0.873 - - - - - - - - - 0.873 T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
89. ENSGALG00000007055 ENSGALG00000007055 60 0.873 - - - - - - - - - 0.873
90. CFAP206 ENSGALG00000015810 16 0.87 - - - 0.870 - - - - - - cilia and flagella associated protein 206, transcript variant X3
91. SPTBN5 395 0.864 - - - 0.864 - - - - - - spectrin beta, non-erythrocytic 5
92. DCAKD ENSGALG00000000870 4 0.864 - - - 0.864 - - - - - - dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
93. PARVA ENSGALG00000005438 91 0.863 - - - - - - - - - 0.863 parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
94. MYH7 ENSGALG00000035594 188 0.861 - - - - - - - - - 0.861 myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
95. IQUB ENSGALG00000008823 65 0.861 - - - - - - - - - 0.861 IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
96. BICC1 ENSGALG00000036095 42 0.86 - - - - - - - - - 0.860 BicC family RNA binding protein 1 [Source:NCBI gene;Acc:423604]
97. ZFYVE26 ENSGALG00000028762 18 0.857 - - - - - - - - - 0.857 zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
98. EML5 ENSGALG00000010639 25 0.857 - - - - - - - - - 0.857 echinoderm microtubule associated protein like 5, transcript variant X1
99. NANOG ENSGALG00000027772 89 0.852 - - - - - - - - - 0.852 Nanog homeobox [Source:NCBI gene;Acc:100272166]
100. FUCA2 ENSGALG00000013773 67 0.845 - - - - - - - - - 0.845 alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA