Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCRIB

Gene Name Gene ID Reads Annotation
SCRIB ENSGALG00000032790 4 scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]











Genes with expression patterns similar to SCRIB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCRIB ENSGALG00000032790 4 4 - - 1.000 - 1.000 1.000 - - - 1.000 scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
2. HAPLN4 ENSGALG00000026563 9 1.677 - - - - - 0.791 - - - 0.886 hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
3. MSANTD1 ENSGALG00000015628 154 1.644 - - 0.749 - 0.895 - - - - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
4. HTR7 ENSGALG00000040549 1 1 - - - - - - - - - 1.000 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
5. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - - - 1.000
6. ENSGALG00000023305 ENSGALG00000023305 168 1 - - - - 1.000 - - - - -
7. THSD7B ENSGALG00000012362 8 1 - - - - 1.000 - - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
8. TRPC7 ENSGALG00000006297 1 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]
9. FUK ENSGALG00000002648 9 1 - - - - - - - - - 1.000 fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
10. DTX1 ENSGALG00000027897 1 1 - - - - - - - - - 1.000 deltex E3 ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:3060]
11. ELFN2 ENSGALG00000012446 11 1 - - - - - - - - - 1.000 extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
12. OPN3 ENSGALG00000010762 1 1 - - - - 1.000 - - - - - opsin 3 [Source:HGNC Symbol;Acc:HGNC:14007]
13. TRAF1 ENSGALG00000001583 3 1 - - - - - - - - - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
14. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - - - 1.000
15. TRHDE ENSGALG00000010200 4 1 - - - - - - - - - 1.000 thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
16. ILDR2 ENSGALG00000015458 16 1 - - - - 1.000 - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
17. ABCC8 ENSGALG00000006172 41 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
18. ENSGALG00000023094 ENSGALG00000023094 15 1 - - - - 1.000 - - - - -
19. CLDN12 ENSGALG00000009038 16 1 - - - - 1.000 - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
20. PLEKHG3 ENSGALG00000036199 1 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
21. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - - - 1.000
22. BRF2 ENSGALG00000003124 1 1 - - - - - - - - - 1.000 BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
23. GAL12 GAL12 2 1 - - - - - - - - - 1.000
24. ENSGALG00000009237 ENSGALG00000009237 3 1 - - - - - - - - - 1.000
25. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - - - - 1.000 translin associated factor X interacting protein 1, transcript variant X2
26. STRA8 ENSGALG00000011722 4 1 - - - - - - - - - 1.000 stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
27. DNM3 ENSGALG00000033244 6 1 - - - - - - - - - 1.000 dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
28. FOLR1 ENSGALG00000017343 1 1 - - - - - - - - - 1.000 folate receptor 1 [Source:NCBI gene;Acc:395638]
29. WDR41 ENSGALG00000004350 16 1 - - - - 1.000 - - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
30. ENSGALG00000015966 ENSGALG00000015966 4 1 - - - - 1.000 - - - - -
31. LOC423752 ENSGALG00000020899 17 1 - - - - - - - - - 1.000 uncharacterized LOC423752, transcript variant X1
32. ELF5 ENSGALG00000035867 6 1 - - - - - - - - - 1.000 E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
33. FAM173B ENSGALG00000013043 4 1 - - - - 1.000 - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
34. ENSGALG00000020649 ENSGALG00000020649 2 1 - - - - - - - - - 1.000
35. MOGAT1 ENSGALG00000005217 12 1 - - - - - - - - - 1.000 monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
36. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - - - 1.000
37. KCNRG ENSGALG00000017012 4 1 - - - - - - - - - 1.000 potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
38. COG3 ENSGALG00000016980 15 1 - - - - - - - - - 1.000 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
39. FOXN1 ENSGALG00000043868 3 1 - - - - - - - - - 1.000 forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
40. TLR1LB TLR1LB 65 1 - - - - - - - - - 1.000
41. FASTK ENSGALG00000033058 21 1 - - - - 1.000 - - - - - Fas activated serine/threonine kinase
42. ENSGALG00000016141 ENSGALG00000016141 10 1 - - - - 1.000 - - - - -
43. LRRC19 ENSGALG00000045028 2 1 - - - - - - - - - 1.000 leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
44. EFHC2 ENSGALG00000016221 8 1 - - - - - - - - - 1.000 EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
45. ENTPD2 ENSGALG00000039696 3 1 - - - - - - - - - 1.000 ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
46. ZHX3 ENSGALG00000039155 5 1 - - - - - - - - - 1.000 zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
47. PIGR ENSGALG00000000919 3 1 - - - - - - - - - 1.000 polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
48. PBEF1 PBEF1 25 1 - - - - - - - - - 1.000
49. RAB4A ENSGALG00000036218 20 1 - - - - - - - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
50. TBPL2 ENSGALG00000012145 1 1 - - - - - - - - - 1.000 TATA-box binding protein like 2 [Source:NCBI gene;Acc:776269]
51. CCL17 ENSGALG00000024466 10 0.975 - - - - - - - - - 0.975 C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
52. RNP ENSGALG00000028991 10 0.972 - - - - - - - - - 0.972 renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
53. KIAA0247 KIAA0247 10 0.971 - - - - 0.971 - - - - -
54. CLDN16 ENSGALG00000025821 14 0.967 - - - - - - - - - 0.967 claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
55. GC ENSGALG00000011612 53 0.949 - - - - - - - - - 0.949 GC, vitamin D binding protein [Source:NCBI gene;Acc:395696]
56. SNORA44 SNORA44 29 0.937 - - - - - - - - - 0.937
57. SERGEF ENSGALG00000006231 35 0.936 - - - - - - - - - 0.936 secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
58. NTRK1 ENSGALG00000019019 17 0.934 - - - - 0.934 - - - - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
59. ENSGALG00000027143 ENSGALG00000027143 23 0.929 - - - - - - - - - 0.929
60. AMPD1 ENSGALG00000002082 228 0.928 - - - - - 0.928 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
61. TMEM161B ENSGALG00000010896 36 0.914 - - - - 0.914 - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
62. CCDC181 ENSGALG00000015221 10 0.913 - - - - - - - - - 0.913 coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
63. MTR ENSGALG00000014464 90 0.908 - - - - - 0.908 - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
64. FMN2 ENSGALG00000031427 77 0.895 - - - - 0.895 - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
65. RASGRP3 ENSGALG00000010435 19 0.886 - - - - - - - - - 0.886 RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
66. CR1L ENSGALG00000023950 98 0.871 - - - - - 0.871 - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
67. SULT6B1 ENSGALG00000046375 23 0.856 - - - - - - - - - 0.856 sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
68. snoMBII-202 snoMBII-202 4 0.851 - - 0.851 - - - - - - -
69. R3HDML ENSGALG00000046204 145 0.851 - - - - 0.851 - - - - - R3H domain containing like [Source:HGNC Symbol;Acc:HGNC:16249]
70. PSEN1 ENSGALG00000009320 15 0.847 - - - - 0.847 - - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
71. CRYAA ENSGALG00000016199 12 0.842 - - - - - - - - - 0.842 crystallin alpha A [Source:NCBI gene;Acc:418546]
72. ZNF654 ENSGALG00000022866 14 0.842 - - - - - - - - - 0.842 zinc finger protein 654 [Source:HGNC Symbol;Acc:HGNC:25612]
73. CNNM2 ENSGALG00000008160 3 0.842 - - - - - - - - - 0.842 cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
74. ENC1 ENSGALG00000014930 10 0.838 - - - - - - - - - 0.838 ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
75. LPHN3 LPHN3 41 0.834 - - - - 0.834 - - - - -
76. INSC ENSGALG00000032558 74 0.832 - - - - - 0.832 - - - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
77. AANAT ENSGALG00000001955 23 0.83 - - - - - - - - - 0.830 aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
78. TMEM82 16 0.83 - - - - - - - - - 0.830 transmembrane protein 82, transcript variant X2
79. MAATS1 ENSGALG00000014980 14 0.83 - - - - - - - - - 0.830 MYCBP-associated, testis expressed 1, transcript variant X1
80. INTS3 8 0.83 - - - - 0.830 - - - - - integrator complex subunit 3, transcript variant X2
81. FAM190B FAM190B 165 0.805 - - - - 0.805 - - - - -
82. CCDC125 ENSGALG00000015572 51 0.804 - - - - 0.804 - - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
83. ZP1 ENSGALG00000031916 122 0.801 - - - - - - - - - 0.801 zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
84. HPRTL ENSGALG00000005361 31 0.796 - - - - 0.796 - - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
85. TIMP2 ENSGALG00000027070 33 0.794 - - - - 0.794 - - - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
86. TAS1R1 ENSGALG00000046030 8 0.792 - - - - 0.792 - - - - - taste 1 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14448]
87. RBM47 ENSGALG00000014267 6 0.791 - - - - - 0.791 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
88. FXYD2 ENSGALG00000007320 168 0.791 - - - - - 0.791 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
89. GPR114 GPR114 46 0.791 - - - - - 0.791 - - - -
90. SPTBN5 395 0.791 - - - - - 0.791 - - - - spectrin beta, non-erythrocytic 5
91. GGT5 ENSGALG00000040504 24 0.791 - - - - - 0.791 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
92. gga-mir-6579-2 ENSGALG00000035346 7 0.791 - - - - - 0.791 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
93. PTPN23 ENSGALG00000038522 93 0.791 - - - - - 0.791 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
94. CNGA3 ENSGALG00000039826 3 0.791 - - - - - 0.791 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
95. LDLRAD3 ENSGALG00000038913 4 0.791 - - - - - 0.791 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
96. NKX2-5 ENSGALG00000002886 81 0.791 - - - - - 0.791 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
97. TRAIL-LIKE ENSGALG00000007240 8 0.791 - - - - - 0.791 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
98. ENSGALG00000018528 ENSGALG00000018528 1 0.791 - - - - - 0.791 - - - -
99. RASSF6 ENSGALG00000011664 7 0.791 - - - - - 0.791 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
100. KLHL1 ENSGALG00000016907 21 0.791 - - - - - 0.791 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]

There are 98 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA