Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCO1

Gene Name Gene ID Reads Annotation
SCO1 ENSGALG00000030475 7304 SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]











Genes with expression patterns similar to SCO1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCO1 ENSGALG00000030475 7304 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
2. HNRNPD ENSGALG00000011184 10686 2.323 - - 0.747 - - - 0.701 0.875 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
3. CHMP6 ENSGALG00000026428 18026 1.759 - - - - - - 0.823 0.936 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
4. UBE2D1 ENSGALG00000021213 5876 1.757 - - - - - - 0.814 0.943 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
5. ERGIC2 ENSGALG00000007183 12870 1.687 - - - - - - 0.758 0.929 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
6. CHMP3 ENSGALG00000015805 11581 1.685 - - - - - - 0.728 0.957 - - charged multivesicular body protein 3
7. MRPL20 ENSGALG00000001542 28764 1.683 - - - - - - 0.786 0.897 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
8. AHCTF1 ENSGALG00000010630 4809 1.648 - - - - - - 0.740 0.908 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
9. TSC22D2 ENSGALG00000027591 6594 1.644 - - - - - - 0.716 0.928 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
10. MED24 ENSGALG00000013506 5403 1.637 - - - - - - 0.723 0.914 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
11. CARS2 ENSGALG00000016847 3814 1.632 - - - - - - - 0.884 0.748 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
12. RUVBL1 ENSGALG00000005931 9379 1.629 - - - - - - 0.792 0.837 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
13. DMB2 ENSGALG00000038393 1257 1.626 - - - - - - - 0.896 0.730 - major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
14. TBL1XR1 ENSGALG00000039182 16983 1.625 - - - - - - 0.739 0.886 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
15. SPG21 ENSGALG00000007262 8050 1.625 - - - - - - 0.786 0.839 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
16. ATG4C ENSGALG00000010985 6102 1.616 - - - - - - 0.707 0.909 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
17. RDM1 ENSGALG00000000243 3388 1.615 - - - - - - - 0.910 0.705 - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
18. CTDP1 ENSGALG00000031461 4818 1.588 - - - - - - 0.829 - 0.759 - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
19. KCTD6 ENSGALG00000007111 3557 1.579 - - - - - - 0.743 0.836 - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
20. NIFK ENSGALG00000011650 14990 1.566 - - - - - - 0.710 0.856 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
21. RRP1B ENSGALG00000035696 12309 1.551 - - - - - - 0.769 - 0.782 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
22. TRIP13 ENSGALG00000033834 6590 1.53 - - - - - - 0.768 - 0.762 - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
23. UTP6 ENSGALG00000003260 4909 1.53 - - - - - - 0.703 0.827 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
24. PDHA1 ENSGALG00000016430 7070 1.516 - - - - - - 0.713 0.803 - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
25. MED28 ENSGALG00000007138 7686 1.495 - - - - - - 0.704 0.791 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
26. NAA38 ENSGALG00000045783 11229 1.478 - - - - - - 0.736 0.742 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
27. RNPS1 ENSGALG00000009288 13588 1.439 - - - - - - 0.713 0.726 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
28. GFPT1 ENSGALG00000036391 14025 0.959 - - - - - - - 0.959 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
29. SLC35E3 ENSGALG00000009940 8560 0.951 - - - - - - - 0.951 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
30. NDUFB3 ENSGALG00000008239 15511 0.95 - - - - - - - 0.950 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
31. DPYD ENSGALG00000005509 4115 0.939 - - - - - - - 0.939 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
32. BAG3 ENSGALG00000009433 6152 0.939 - - - - - - - 0.939 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
33. FBXO33 ENSGALG00000010192 2917 0.937 - - - - - - - 0.937 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
34. MRPS23 ENSGALG00000005559 10360 0.937 - - - - - - - 0.937 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
35. BCLAF1 ENSGALG00000013935 7596 0.936 - - - - - - - 0.936 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
36. SNAI2 ENSGALG00000030902 8201 0.936 - - - - - - - 0.936 - - snail family transcriptional repressor 2
37. CAMSAP2 ENSGALG00000002145 6109 0.934 - - - - - - - 0.934 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
38. LATS2 4776 0.934 - - - - - - - 0.934 - - large tumor suppressor kinase 2
39. CTSC ENSGALG00000017239 7651 0.934 - - - - - - - 0.934 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
40. WASH1 WASH1 3240 0.931 - - - - - - - 0.931 - -
41. ENSGALG00000003150 ENSGALG00000003150 10001 0.93 - - - - - - - 0.930 - -
42. SRP72 ENSGALG00000011403 13666 0.927 - - - - - - - 0.927 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
43. TMEM59 ENSGALG00000010746 4669 0.927 - - - - - - - 0.927 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
44. TRIM24 ENSGALG00000012823 2725 0.926 - - - - - - - 0.926 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
45. PWWP2A ENSGALG00000038202 3686 0.926 - - - - - - - 0.926 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
46. MRPL18 ENSGALG00000011625 7855 0.926 - - - - - - - 0.926 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
47. EFHD1 ENSGALG00000001428 2831 0.923 - - - - - - - 0.923 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
48. CDC42BPA ENSGALG00000009158 3926 0.923 - - - - - - - 0.923 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
49. MTERFD1 MTERFD1 3640 0.922 - - - - - - - 0.922 - -
50. NDUFAF1 ENSGALG00000008587 14779 0.922 - - - - - - - 0.922 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
51. CKAP2 ENSGALG00000017025 25020 0.922 - - - - - - - 0.922 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
52. PPCS ENSGALG00000004882 5759 0.921 - - - - - - - 0.921 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
53. MARC1 ENSGALG00000009453 5675 0.921 - - - - - - - 0.921 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
54. BRCC3 ENSGALG00000005383 4844 0.92 - - - - - - - 0.920 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
55. ARFRP1 ENSGALG00000006101 3743 0.919 - - - - - - - 0.919 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
56. MAPK9 ENSGALG00000039099 5467 0.919 - - - - - - - 0.919 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
57. CCDC61 ENSGALG00000006714 8066 0.919 - - - - - - - 0.919 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
58. MLLT10 ENSGALG00000007928 4022 0.918 - - - - - - - 0.918 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
59. SMDT1 ENSGALG00000011897 9360 0.917 - - - - - - - 0.917 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
60. LIG3 ENSGALG00000002288 7198 0.917 - - - - - - - 0.917 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
61. SNAP29 ENSGALG00000040128 3581 0.916 - - - - - - - 0.916 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
62. VGLL4 ENSGALG00000004937 3762 0.915 - - - - - - - 0.915 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
63. PIGK ENSGALG00000009015 7942 0.914 - - - - - - - 0.914 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
64. PGAM5 ENSGALG00000002137 7700 0.914 - - - - - - - 0.914 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
65. GLG1 ENSGALG00000039818 6221 0.914 - - - - - - - 0.914 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
66. TXNDC5 ENSGALG00000012784 4678 0.913 - - - - - - - 0.913 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
67. NDUFS6 ENSGALG00000013191 15874 0.913 - - - - - - - 0.913 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
68. HPCAL1 ENSGALG00000016443 6633 0.912 - - - - - - - 0.912 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
69. SLC25A1 ENSGALG00000041760 4744 0.911 - - - - - - - 0.911 - - solute carrier family 25 member 1, transcript variant X2
70. ECHS1 ENSGALG00000024271 9364 0.909 - - - - - - - 0.909 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
71. BID ENSGALG00000013039 12427 0.909 - - - - - - - 0.909 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
72. NET1 ENSGALG00000008437 9850 0.907 - - - - - - - 0.907 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
73. TCEA1 ENSGALG00000015274 2706 0.907 - - - - - - - 0.907 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
74. MAST2 ENSGALG00000010313 2975 0.907 - - - - - - - 0.907 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
75. CHAF1A ENSGALG00000001126 6506 0.905 - - - - - - - 0.905 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
76. CPQ ENSGALG00000030866 3962 0.904 - - - - - - - 0.904 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
77. SMIM12 ENSGALG00000030261 5860 0.904 - - - - - - - 0.904 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
78. KDM4A ENSGALG00000010074 7219 0.902 - - - - - - - 0.902 - - lysine demethylase 4A
79. PYCR1 ENSGALG00000007300 7987 0.902 - - - - - - - 0.902 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
80. EFTUD2 ENSGALG00000000988 17913 0.901 - - - - - - - 0.901 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
81. gga-mir-1306 ENSGALG00000025271 1231 0.9 - - - - - - - 0.900 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
82. CENPH ENSGALG00000014788 10601 0.9 - - - - - - - 0.900 - - centromere protein H [Source:NCBI gene;Acc:395316]
83. RNF214 ENSGALG00000036993 3729 0.899 - - - - - - - 0.899 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
84. UCK2 ENSGALG00000003510 2512 0.899 - - - - - - - 0.899 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
85. TUBAL3 ENSGALG00000008444 2979 0.898 - - - - - - - 0.898 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
86. DCTN5 ENSGALG00000006088 3113 0.897 - - - - - - - 0.897 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
87. NAE1 ENSGALG00000038957 13777 0.897 - - - - - - - 0.897 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
88. ACSL1 ENSGALG00000010628 2560 0.897 - - - - - - - 0.897 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
89. DUSP14 ENSGALG00000027641 3662 0.897 - - - - - - - 0.897 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
90. CEP170 ENSGALG00000010733 4177 0.896 - - - - - - - 0.896 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
91. VCAN ENSGALG00000015624 11489 0.895 - - - - - - - 0.895 - - versican [Source:NCBI gene;Acc:395565]
92. FGFR1OP ENSGALG00000011423 2418 0.895 - - - - - - - 0.895 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
93. NR2F2 ENSGALG00000007000 4911 0.895 - - - - - - - 0.895 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
94. GOLGB1 ENSGALG00000041494 2376 0.894 - - - - - - - 0.894 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
95. gga-mir-1772 ENSGALG00000025300 2892 0.894 - - - - - - - 0.894 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
96. ARHGEF4 ENSGALG00000002193 558 0.893 - - - - - - - 0.893 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
97. ZC3H3 ENSGALG00000043265 1638 0.892 - - - - - - - 0.892 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
98. DNAJA1 ENSGALG00000023066 3820 0.892 - - - - - - - 0.892 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
99. SMARCC1 ENSGALG00000032642 4842 0.891 - - - - - - - 0.891 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
100. PEO1 PEO1 6747 0.89 - - - - - - - 0.890 - -

There are 683 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA