Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCO1

Gene Name Gene ID Reads Annotation
SCO1 ENSDARG00000067593, ENSDARG00000113312 258 SCO1 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-140909-1]










Genes with expression patterns similar to SCO1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SCO1 ENSDARG00000067593, ENSDARG00000113312 258 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SCO1 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-140909-1]
2. gnptg ENSDARG00000038566 259 1.602 - 0.849 - - - - 0.753 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
3. si:dkey-243i1.1 ENSDARG00000034227 257 1.551 - - - - - 0.778 0.773 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
4. snx14 ENSDARG00000006332 435 1.548 - - - - - 0.739 0.809 - - sorting nexin 14 [Source:ZFIN;Acc:ZDB-GENE-040724-144]
5. slc2a1b ENSDARG00000007412 1028 1.508 0.777 - - - - - 0.731 - - solute carrier family 2 (facilitated glucose transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-090915-1]
6. ftr56 ENSDARG00000030954 23 1.503 0.748 - - - - - 0.755 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
7. esf1 ENSDARG00000008740 1206 1.499 0.798 - - - - 0.701 - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
8. slc35f2 ENSDARG00000069745, ENSDARG00000110521 260 1.483 - 0.756 - - - - 0.727 - - solute carrier family 35, member F2 [Source:ZFIN;Acc:ZDB-GENE-030131-5516]
9. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 1.476 0.719 - - - - 0.757 - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
10. rabl2 ENSDARG00000063321, ENSDARG00000109811, ENSDARG00000112447 301 1.422 0.709 - - - - 0.713 - - - RAB, member of RAS oncogene family-like 2 [Source:ZFIN;Acc:ZDB-GENE-060503-464]
11. SNORD35 SNORD35 245 0.936 - - - - - - 0.936 - -
12. brms1la ENSDARG00000006235 2011 0.896 - 0.896 - - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
13. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.892 - 0.892 - - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
14. CUTA CUTA 1149 0.891 - - - - - 0.891 - - -
15. si:ch211-209a2.1 250 0.885 - 0.885 - - - - - - - si:ch211-209a2.1, transcript variant X2
16. csrp2bp 2642 0.88 - 0.880 - - - - - - - csrp2 binding protein
17. C3H17orf53 C3H17orf53 191 0.879 0.879 - - - - - - - -
18. pias1b ENSDARG00000062445 538 0.877 - - - - - - 0.877 - - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
19. nup107 ENSDARG00000016010 1043 0.874 - 0.874 - - - - - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
20. TIMM22 ENSDARG00000091413 957 0.873 - 0.873 - - - - - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
21. aggf1 ENSDARG00000060109 574 0.864 - - - - - 0.864 - - - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
22. zgc:171310 ENSDARG00000110627 23 0.862 - - - - - - 0.862 - - zgc:171310 [Source:ZFIN;Acc:ZDB-GENE-070822-11]
23. CR392330.2 ENSDARG00000093391 62 0.859 - - - - - - 0.859 - -
24. zgc:114041 ENSDARG00000052109 76 0.858 0.858 - - - - - - - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
25. lifrb ENSDARG00000039863 102 0.857 0.857 - - - - - - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
26. brms1lb ENSDARG00000018047 453 0.856 - 0.856 - - - - - - - BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
27. CLDN23_1 CLDN23_1 198 0.853 0.853 - - - - - - - -
28. enthd2 481 0.853 0.853 - - - - - - - - ENTH domain containing 2
29. kdm8 ENSDARG00000102512 321 0.853 0.853 - - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
30. si:dkey-19h16.2 si:dkey-19h16.2 1077 0.852 - 0.852 - - - - - - -
31. C1S ENSDARG00000100599 20 0.849 - - - - - - 0.849 - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
32. kdm6al ENSDARG00000059794 545 0.849 - 0.849 - - - - - - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
33. ft1 ENSDARG00000059056 102 0.844 - - - - - - 0.844 - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
34. selo 879 0.832 - - - - - - 0.832 - - selenoprotein O
35. CABZ01043370.1 CABZ01043370.1 2013 0.831 0.831 - - - - - - - -
36. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.83 - - - - - - 0.830 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
37. STYK1 108 0.829 - - - - - - 0.829 - - serine/threonine/tyrosine kinase 1
38. TIAM1 TIAM1 837 0.826 0.826 - - - - - - - -
39. FP103059.1 FP103059.1 750 0.826 - - - - - - 0.826 - -
40. ZNF408 ENSDARG00000036043 232 0.825 - - - - - - 0.825 - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
41. eif3hb ENSDARG00000036116 203 0.825 - - - - - - 0.825 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
42. slc25a40 ENSDARG00000015856 359 0.824 0.824 - - - - - - - - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
43. KLHL35 ENSDARG00000063577 77 0.823 - - - - - - 0.823 - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
44. wipi2 ENSDARG00000037871 425 0.822 - 0.822 - - - - - - - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
45. CABZ01020188.2 CABZ01020188.2 114 0.822 - - - - - 0.822 - - -
46. CR385063.1 CR385063.1 590 0.822 - - - - - 0.822 - - -
47. CABZ01024770.1 CABZ01024770.1 150 0.821 - - - - - 0.821 - - -
48. pnpla3 ENSDARG00000102020 163 0.82 - 0.820 - - - - - - - patatin-like phospholipase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-27]
49. hic1l ENSDARG00000045660 1489 0.82 0.820 - - - - - - - - hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
50. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 0.818 - - - - - - 0.818 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
51. abhd14a ENSDARG00000058367 546 0.817 0.817 - - - - - - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
52. ap2m1b ENSDARG00000033899 317 0.817 - - - - - - 0.817 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
53. suz12a ENSDARG00000070256 2229 0.815 - 0.815 - - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
54. LONRF2 LONRF2 721 0.815 - 0.815 - - - - - - -
55. dync1li1 ENSDARG00000098317 729 0.815 - - - - - - 0.815 - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
56. PACS1_1 PACS1_1 1264 0.813 - 0.813 - - - - - - -
57. zgc:63831 ENSDARG00000009313 895 0.811 - - - - - - 0.811 - - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
58. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.811 0.811 - - - - - - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
59. dna2 ENSDARG00000078759 846 0.809 - - - - - 0.809 - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
60. chst12a ENSDARG00000028786 598 0.808 - - - - - - 0.808 - - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
61. carf ENSDARG00000019950 303 0.808 - - - - - - 0.808 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
62. CABZ01038494.1 ENSDARG00000088258 908 0.806 0.806 - - - - - - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
63. HS1BP3 ENSDARG00000034222 304 0.806 - - - - - - 0.806 - - HCLS1 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-391]
64. RFX7 885 0.806 - - - - - - 0.806 - - regulatory factor X, 7
65. mir22a-1 mir22a-1 192 0.806 - - - - - - 0.806 - -
66. si:dkey-10o6.2 ENSDARG00000074628 22 0.804 - - - - - - 0.804 - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
67. tmem101 ENSDARG00000114508 494 0.803 - - - - - - 0.803 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
68. si:dkey-75a21.2 ENSDARG00000093188 258 0.803 - - - - - - 0.803 - - si:dkey-75a21.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6823]
69. pik3ip1 ENSDARG00000003281 339 0.803 - 0.803 - - - - - - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
70. xrcc6bp1 662 0.802 - - - - - - 0.802 - - XRCC6 binding protein 1
71. si:dkey-102c8.1 si:dkey-102c8.1 85 0.802 - - - - - - 0.802 - -
72. kpna1 ENSDARG00000016360 1275 0.801 0.801 - - - - - - - - karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
73. rrp36 ENSDARG00000032516, ENSDARG00000109916 916 0.801 0.801 - - - - - - - - ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]
74. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.801 - - - - - - 0.801 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
75. si:dkey-190g11.3 ENSDARG00000025914 49 0.801 - - - - - 0.801 - - - si:dkey-190g11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-341]
76. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 0.8 0.800 - - - - - - - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
77. si:ch211-207c6.6 si:ch211-207c6.6 32 0.8 0.800 - - - - - - - -
78. TTBK2_1 TTBK2_1 649 0.8 0.800 - - - - - - - -
79. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 0.8 - - - - - - 0.800 - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
80. prkx ENSDARG00000060716 530 0.799 - - - - - 0.799 - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
81. CT867948.2 CT867948.2 131 0.798 - - - - - - 0.798 - -
82. mrps10 ENSDARG00000045913 1453 0.798 - 0.798 - - - - - - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
83. naglu ENSDARG00000030156 378 0.798 - - - - - - 0.798 - - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
84. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 0.798 - 0.798 - - - - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
85. lzts1 ENSDARG00000075565 23 0.797 0.797 - - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
86. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 0.796 - 0.796 - - - - - - - matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
87. gpn2 ENSDARG00000103127 304 0.796 - - - - - - 0.796 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
88. pink1 ENSDARG00000001929 320 0.795 - 0.795 - - - - - - - PTEN induced putative kinase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-53]
89. CR352225.2 CR352225.2 1138 0.795 0.795 - - - - - - - -
90. MTHFS ENSDARG00000104487 770 0.794 - - - - - - 0.794 - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
91. rwdd2b ENSDARG00000055426 294 0.794 - - - - - - 0.794 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
92. slc17a9a ENSDARG00000042954 36 0.793 0.793 - - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
93. srfbp1 ENSDARG00000075323 2262 0.792 - - - - - 0.792 - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
94. UTP14A UTP14A 1471 0.792 - 0.792 - - - - - - -
95. CU466279.1 CU466279.1 84 0.792 0.792 - - - - - - - -
96. DUSP26 ENSDARG00000103752 404 0.792 - 0.792 - - - - - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
97. si:ch211-162i8.5 ENSDARG00000111716 76 0.791 - - - - - - 0.791 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
98. mpc1 ENSDARG00000093448 382 0.79 - 0.790 - - - - - - - mitochondrial pyruvate carrier 1 [Source:ZFIN;Acc:ZDB-GENE-040718-94]
99. lace1a lace1a 561 0.79 - - - - - - 0.790 - -
100. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.79 - - - - - - 0.790 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]

There are 422 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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