Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCN5A

Gene Name Gene ID Reads Annotation
SCN5A ENSGALG00000006112 137 Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]











Genes with expression patterns similar to SCN5A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN5A ENSGALG00000006112 137 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
2. SIL1 ENSGALG00000002457 147 2.386 - - 0.819 - 0.809 - 0.758 - - - SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
3. LMOD2 ENSGALG00000008805 113 1.819 0.819 - - - - 1.000 - - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
4. ENSGALG00000028778 ENSGALG00000028778 47 1.712 - - 0.943 0.769 - - - - - -
5. SRRL ENSGALG00000002638 26 1.711 - - - - - 1.000 - 0.711 - - serine racemase-like, transcript variant X8
6. CHOBF-1 CHOBF-1 41 1.682 - - - - - 0.808 0.874 - - -
7. TBC1D8B ENSGALG00000009040 75 1.638 - - 0.914 - - - - 0.724 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
8. ENSGALG00000023485 ENSGALG00000023485 46 1.578 - - - 0.859 - - 0.719 - - -
9. A1CF ENSGALG00000003765 36 1.546 - - - 0.837 - - - 0.709 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
10. LOC418544 ENSGALG00000019175 19 1.533 - - - - - 0.813 - 0.720 - - cystathionine beta-synthase-like
11. TMEM251 ENSGALG00000017387 3423 1.488 - - 0.784 - 0.704 - - - - - transmembrane protein 251 [Source:NCBI gene;Acc:423422]
12. STC2 ENSGALG00000002893 2119 1.457 - - 0.704 0.753 - - - - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
13. BVES ENSGALG00000015410 435 1.444 0.724 - 0.720 - - - - - - - blood vessel epicardial substance [Source:NCBI gene;Acc:408032]
14. BACE2 ENSGALG00000034932 1570 1.421 - - 0.720 0.701 - - - - - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
15. FAM237A ENSGALG00000020836 21 1 - - - - - 1.000 - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
16. ENSGALG00000008404 ENSGALG00000008404 6 1 - - - - - 1.000 - - - -
17. PLAGL2 ENSGALG00000006586 3 1 - - - - - 1.000 - - - - PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
18. NCAM2 ENSGALG00000015737 5 1 - - - - - 1.000 - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
19. RGS6 ENSGALG00000009368 19 1 - - - - - 1.000 - - - - regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
20. AIM1 51 1 - - - - - 1.000 - - - - absent in melanoma 1, transcript variant X2
21. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - 1.000 - - - -
22. MCOLN2 ENSGALG00000008722 33 1 - - - - - 1.000 - - - - mucolipin 2 [Source:HGNC Symbol;Acc:HGNC:13357]
23. ENSGALG00000026544 ENSGALG00000026544 1 1 - - - - - 1.000 - - - -
24. ENSGALG00000014502 ENSGALG00000014502 2 1 - - - - - 1.000 - - - -
25. KNG1 ENSGALG00000046159 17 1 - - - - - 1.000 - - - - kininogen 1 [Source:HGNC Symbol;Acc:HGNC:6383]
26. ENSGALG00000011567 ENSGALG00000011567 2 1 - - - - - 1.000 - - - -
27. PPAP2C PPAP2C 1 1 - - - - - 1.000 - - - -
28. UBE2J1 ENSGALG00000015775 13 1 - - - - - 1.000 - - - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
29. NR2E1 ENSGALG00000015305 3 1 - - - - - 1.000 - - - - nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:396082]
30. VIT ENSGALG00000010583 16 1 - - - - - 1.000 - - - - vitrin [Source:NCBI gene;Acc:421471]
31. CDK6 ENSGALG00000009476 17 1 - - - - - 1.000 - - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
32. PLA2G5 ENSGALG00000018977 0 1 - - - - - 1.000 - - - - phospholipase A2 group V [Source:NCBI gene;Acc:771655]
33. TNN ENSGALG00000004538 21 1 - - - - - 1.000 - - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
34. TRPS1 ENSGALG00000031700 39 1 - - - - - 1.000 - - - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
35. GRM8 ENSGALG00000039403 17 1 - - - - - 1.000 - - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
36. SPIA5 ENSGALG00000020390 0 1 - - - - - 1.000 - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5, transcript variant X1
37. PPP1R9A 4 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 9A, transcript variant X6
38. SLC6A17 ENSGALG00000000394 10 1 - - - - - 1.000 - - - - solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
39. AQP12 AQP12 11 1 - - - - - 1.000 - - - -
40. CDH9 ENSGALG00000012923 10 1 - - - - - 1.000 - - - - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
41. UPK1B ENSGALG00000015079 1 1 - - - - - 1.000 - - - - uroplakin 1B [Source:HGNC Symbol;Acc:HGNC:12578]
42. ENSGALG00000009151 ENSGALG00000009151 6 1 - - - - - 1.000 - - - -
43. SNORA35 SNORA35 0 1 - - - - - 1.000 - - - -
44. DRG11 DRG11 32 1 - - - - - 1.000 - - - -
45. ENSGALG00000016493 ENSGALG00000016493 2 1 - - - - - 1.000 - - - -
46. ADAMTS8 ENSGALG00000001370 0 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
47. ENSGALG00000026657 ENSGALG00000026657 4 1 - - - - - 1.000 - - - -
48. PAH ENSGALG00000012754 15 1 - - - - - 1.000 - - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
49. SCMH1 ENSGALG00000000672 3 1 - - - - - 1.000 - - - - Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
50. MTMR11 ENSGALG00000035923 1 1 - - - - - 1.000 - - - - myotubularin related protein 11 [Source:HGNC Symbol;Acc:HGNC:24307]
51. SYNJ1 ENSGALG00000034317 7 1 - - - - - 1.000 - - - - synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]
52. IL19 ENSGALG00000000911 1 1 - - - - - 1.000 - - - - interleukin 19 [Source:HGNC Symbol;Acc:HGNC:5990]
53. LAD1 ENSGALG00000000309 2 1 - - - - - 1.000 - - - - ladinin 1 [Source:HGNC Symbol;Acc:HGNC:6472]
54. CPNE4 ENSGALG00000029235 32 1 - - - - - 1.000 - - - - copine 4 [Source:HGNC Symbol;Acc:HGNC:2317]
55. TRIM41 ENSGALG00000030569 5 1 - - - - - 1.000 - - - - tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
56. ABCC8 ENSGALG00000006172 41 1 - - - - - 1.000 - - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
57. DRD5 ENSGALG00000014975 1 1 - - - - - 1.000 - - - - dopamine receptor D5 [Source:HGNC Symbol;Acc:HGNC:3026]
58. ILDR2 ENSGALG00000015458 16 1 - - - - - 1.000 - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
59. WDR86 ENSGALG00000019690 113 1 - - - - - 1.000 - - - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]
60. ENSGALG00000013327 ENSGALG00000013327 16 1 - - - - - 1.000 - - - -
61. USP19 ENSGALG00000006824 44 1 - - - - - 1.000 - - - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
62. FAM46D 22 1 - - - - - 1.000 - - - - family with sequence similarity 46 member D
63. SLC16A3 ENSGALG00000002728 323 1 - - - - - 1.000 - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
64. AUTS2 ENSGALG00000001153 24 1 - - - - - 1.000 - - - - AUTS2, activator of transcription and developmental regulator [Source:HGNC Symbol;Acc:HGNC:14262]
65. DNER ENSGALG00000002958 3 1 - - - - - 1.000 - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
66. ENSGALG00000015429 ENSGALG00000015429 34 1 - - - - - 1.000 - - - -
67. ABHD2 ENSGALG00000006689 29 1 - - - - - 1.000 - - - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
68. FEM1A ENSGALG00000004168 14 1 - - - - - 1.000 - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
69. ENSGALG00000001004 ENSGALG00000001004 17 1 - - - - - 1.000 - - - -
70. AVP ENSGALG00000014117 19 1 - - - - - 1.000 - - - - arginine vasopressin [Source:NCBI gene;Acc:396101]
71. SLC10A2 ENSGALG00000016858 4 1 - - - - - 1.000 - - - - Gallus gallus solute carrier family 10 member 2 (SLC10A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319027]
72. SNORD95 SNORD95 6 1 - - - - - 1.000 - - - -
73. DSCAM ENSGALG00000016138 16 1 - - - - - 1.000 - - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
74. SLC26A9 ENSGALG00000000745 1 1 - - - - - 1.000 - - - - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
75. ZC2HC1B 15 1 - - - - - 1.000 - - - - zinc finger C2HC-type containing 1B
76. EXOC6B ENSGALG00000016098 3 1 - - - - - 1.000 - - - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
77. SYTL2L ENSGALG00000008326 5 1 - - - - - 1.000 - - - - synaptotagmin-like protein 2-like, transcript variant X4
78. ASB18 ENSGALG00000046564 7 1 - - - - - 1.000 - - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
79. CDO1 ENSGALG00000002358 74 1 - - - - - 1.000 - - - - cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]
80. MEP1A ENSGALG00000033033 2 1 - - - - - 1.000 - - - - meprin A subunit alpha [Source:NCBI gene;Acc:422060]
81. ATXN3 ENSGALG00000010766 48 0.962 - - 0.962 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
82. NCOA6 ENSGALG00000001182 83 0.961 - - - - - 0.961 - - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
83. AHR2 ENSGALG00000023742 21 0.96 - - 0.960 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
84. EML5 ENSGALG00000010639 25 0.958 - - 0.958 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
85. EPHA1 ENSGALG00000014687 174 0.954 - - 0.954 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
86. C15orf60 C15orf60 16 0.953 - - 0.953 - - - - - - -
87. PHTF2 ENSGALG00000008335 722 0.948 - - 0.948 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
88. FSCN2 ENSGALG00000023354 13 0.947 - - 0.947 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
89. KPNA5 ENSGALG00000014937 28 0.946 - - 0.946 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
90. DNALI1 ENSGALG00000001996 64 0.946 - - 0.946 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
91. PDZK1IP1 ENSGALG00000010473 551 0.945 - - 0.945 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
92. LLGL1 ENSGALG00000014408 15 0.943 - - 0.943 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
93. GALNT11 ENSGALG00000006233 210 0.942 - - 0.942 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
94. DLX6 ENSGALG00000023195 29 0.941 - - 0.941 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
95. ENSGALG00000005723 ENSGALG00000005723 36 0.939 - - 0.939 - - - - - - -
96. TOX3 ENSGALG00000034649 54 0.939 - - 0.939 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
97. FAM3B ENSGALG00000016140 111 0.938 - - 0.938 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
98. OTOA ENSGALG00000007070 94 0.936 - - 0.936 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
99. SCNM1 ENSGALG00000046607 665 0.934 - - 0.934 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
100. PRC1 ENSGALG00000012836 20 0.933 - - 0.933 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]

There are 429 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA