Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN4B

Gene Name Gene ID Reads Annotation
SCN4B ENSGALG00000007409 22 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]











Genes with expression patterns similar to SCN4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN4B ENSGALG00000007409 22 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
2. STAR ENSGALG00000003242 4 2.814 - - - 0.814 - 1.000 - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
3. CUBN ENSGALG00000008704 21 2.639 - - - - 0.803 - 0.836 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
4. PPIL6 ENSGALG00000015237 11 2 - - - - - 1.000 - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
5. ZP2 ENSGALG00000002428 10 1.988 - - 0.988 1.000 - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
6. KNDC1 ENSGALG00000007007 31 1.964 - - 0.964 - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
7. COL4A3 ENSGALG00000038612 41 1.941 - - - - - - 0.941 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
8. MUT ENSGALG00000016697 43 1.941 - - - - - - 0.941 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
9. CBR4 ENSGALG00000009714 7 1.897 - - - - - - - 1.000 - 0.897 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
10. HDAC3 ENSGALG00000002634 130 1.883 - - 0.915 - - 0.968 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
11. SLC6A6 ENSGALG00000006425 31 1.879 - - - - 0.879 - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
12. BLB1 ENSGALG00000000141 13 1.879 - - - - 0.879 - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
13. BMPR1A ENSGALG00000002003 20 1.877 - - 0.877 - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
14. TPTE2 ENSGALG00000017031 29 1.837 - - 0.979 - - 0.858 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
15. ENSGALG00000001138 ENSGALG00000001138 21 1.836 - - - - - - 0.836 1.000 - -
16. PIK3CG ENSGALG00000008081 5 1.836 - - - 1.000 - - 0.836 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
17. CD99L2 ENSGALG00000009075 5 1.83 - - - - 0.830 - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
18. VEPH1 ENSGALG00000009682 51 1.824 - - 0.988 - - - 0.836 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
19. EIF4H ENSGALG00000001313 59 1.776 - - - - - 0.776 - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
20. RBM15 ENSGALG00000000401 22 1.771 - - - - - 0.771 - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
21. LONRF3 ENSGALG00000008860 55 1.761 - - 0.869 - - 0.892 - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
22. STMN2 ENSGALG00000039690 989 1.745 - - - - - 0.745 - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
23. MYO1D ENSGALG00000000674 14 1.731 - - - - - - - 1.000 - 0.731 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
24. CALCA CALCA 682 1.712 - - - - - 0.750 - 0.962 - -
25. ENSGALG00000001478 ENSGALG00000001478 23 1.677 - - - - - - 0.836 - - 0.841
26. ARHGEF18 ENSGALG00000003572 224 1.632 - - 0.765 - - 0.867 - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
27. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
28. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
29. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
30. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
31. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
32. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
33. FRMD4A ENSGALG00000034992 6 1 - - - - - - - 1.000 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
34. PICALM ENSGALG00000039037 57 1 - - - - - - - 1.000 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
35. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
36. C8orf22 C8orf22 37 1 - - - - - 1.000 - - - -
37. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
38. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
39. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
40. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
41. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
42. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
43. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
44. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
45. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
46. ENSGALG00000009123 ENSGALG00000009123 9 1 - - - 1.000 - - - - - -
47. SYNRG ENSGALG00000005468 27 1 - - - - - 1.000 - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
48. JAKMIP3 ENSGALG00000010486 2 1 - - - 1.000 - - - - - - Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
49. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
50. SLC5A12 ENSGALG00000013304 1 1 - - - - - 1.000 - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
51. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
52. PVRL1 PVRL1 3 1 - - - 1.000 - - - - - -
53. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
54. MST MST 9 1 - - - - - 1.000 - - - -
55. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
56. CMBL ENSGALG00000013033 3 1 - - - - - 1.000 - - - - carboxymethylenebutenolidase homolog, transcript variant X4
57. PIT-1 PIT-1 8 1 - - - 1.000 - - - - - -
58. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
59. uc_2 uc_2 3 1 - - - 1.000 - - - - - -
60. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
61. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
62. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
63. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
64. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
65. CFTII CFTII 6 1 - - - - - - - 1.000 - -
66. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
67. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
68. CECR5 3 1 - - - - - 1.000 - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X2
69. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
70. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
71. AK7 ENSGALG00000011093 9 1 - - - - - 1.000 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
72. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
73. GPR160 ENSGALG00000039989 1 1 - - - - - 1.000 - - - - G protein-coupled receptor 160 [Source:NCBI gene;Acc:424992]
74. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
75. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
76. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
77. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
78. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
79. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
80. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
81. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
82. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
83. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
84. PAPPA ENSGALG00000007079 6 1 - - - - - - - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
85. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
86. CDYL2 ENSGALG00000012978 6 1 - - - 1.000 - - - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
87. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
88. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
89. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
90. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
91. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
92. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
93. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
94. SLC47A2 ENSGALG00000004778 2 1 - - - - - 1.000 - - - - solute carrier family 47 member 2 [Source:NCBI gene;Acc:417616]
95. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
96. TLX3 ENSGALG00000002191 4 1 - - - 1.000 - - - - - - T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532]
97. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
98. DPF3 ENSGALG00000009352 7 1 - - - 1.000 - - - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
99. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
100. DENND5A ENSGALG00000005840 54 1 - - - - - - - 1.000 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA