Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN4B

Gene Name Gene ID Reads Annotation
SCN4B ENSGALG00000007409 22 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]











Genes with expression patterns similar to SCN4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN4B ENSGALG00000007409 22 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
2. STAR ENSGALG00000003242 4 2.814 - - - 0.814 - 1.000 - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
3. CUBN ENSGALG00000008704 21 2.639 - - - - 0.803 - 0.836 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
4. PPIL6 ENSGALG00000015237 11 2 - - - - - 1.000 - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
5. ZP2 ENSGALG00000002428 10 1.988 - - 0.988 1.000 - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
6. KNDC1 ENSGALG00000007007 31 1.964 - - 0.964 - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
7. MUT ENSGALG00000016697 43 1.941 - - - - - - 0.941 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
8. COL4A3 ENSGALG00000038612 41 1.941 - - - - - - 0.941 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
9. CBR4 ENSGALG00000009714 7 1.897 - - - - - - - 1.000 - 0.897 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
10. HDAC3 ENSGALG00000002634 130 1.883 - - 0.915 - - 0.968 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
11. SLC6A6 ENSGALG00000006425 31 1.879 - - - - 0.879 - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
12. BLB1 ENSGALG00000000141 13 1.879 - - - - 0.879 - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
13. BMPR1A ENSGALG00000002003 20 1.877 - - 0.877 - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
14. TPTE2 ENSGALG00000017031 29 1.837 - - 0.979 - - 0.858 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
15. ENSGALG00000001138 ENSGALG00000001138 21 1.836 - - - - - - 0.836 1.000 - -
16. PIK3CG ENSGALG00000008081 5 1.836 - - - 1.000 - - 0.836 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
17. CD99L2 ENSGALG00000009075 5 1.83 - - - - 0.830 - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
18. VEPH1 ENSGALG00000009682 51 1.824 - - 0.988 - - - 0.836 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
19. EIF4H ENSGALG00000001313 59 1.776 - - - - - 0.776 - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
20. RBM15 ENSGALG00000000401 22 1.771 - - - - - 0.771 - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
21. LONRF3 ENSGALG00000008860 55 1.761 - - 0.869 - - 0.892 - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
22. STMN2 ENSGALG00000039690 989 1.745 - - - - - 0.745 - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
23. MYO1D ENSGALG00000000674 14 1.731 - - - - - - - 1.000 - 0.731 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
24. CALCA CALCA 682 1.712 - - - - - 0.750 - 0.962 - -
25. ENSGALG00000001478 ENSGALG00000001478 23 1.677 - - - - - - 0.836 - - 0.841
26. ARHGEF18 ENSGALG00000003572 224 1.632 - - 0.765 - - 0.867 - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
27. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
28. KCNK9 ENSGALG00000037285 1 1 - - - - - 1.000 - - - - potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
29. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
30. PVRL1 PVRL1 3 1 - - - 1.000 - - - - - -
31. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
32. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
33. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
34. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
35. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
36. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
37. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
38. ARHGEF37 ENSGALG00000039652 28 1 - - - 1.000 - - - - - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
39. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
40. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
41. CFTII CFTII 6 1 - - - - - - - 1.000 - -
42. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
43. CFD ENSGALG00000040832 222 1 - - - - - - - 1.000 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
44. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
45. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
46. OSTN ENSGALG00000007226 33 1 - - - 1.000 - - - - - - osteocrin [Source:NCBI gene;Acc:424907]
47. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
48. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
49. ENSGALG00000021517 ENSGALG00000021517 7 1 - - - 1.000 - - - - - -
50. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
51. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
52. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
53. AK7 ENSGALG00000011093 9 1 - - - - - 1.000 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
54. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
55. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
56. ENSGALG00000009123 ENSGALG00000009123 9 1 - - - 1.000 - - - - - -
57. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
58. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
59. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
60. ENSGALG00000000819 ENSGALG00000000819 13 1 - - - 1.000 - - - - - -
61. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
62. LOC417973 ENSGALG00000019325 9 1 - - - - - 1.000 - - - - uncharacterized LOC417973, transcript variant X1
63. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
64. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
65. WDR63 ENSGALG00000008696 15 1 - - - 1.000 - - - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
66. SPARCL1 ENSGALG00000010929 10 1 - - - 1.000 - - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
67. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
68. TVB TVB 11 1 - - - 1.000 - - - - - -
69. FKHR FKHR 1 1 - - - 1.000 - - - - - -
70. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
71. SLC47A2 ENSGALG00000004778 2 1 - - - - - 1.000 - - - - solute carrier family 47 member 2 [Source:NCBI gene;Acc:417616]
72. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
73. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
74. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
75. HEPACAM2 ENSGALG00000009482 3 1 - - - - - 1.000 - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
76. KLHL28 ENSGALG00000012489 2 1 - - - - - 1.000 - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
77. SLC26A9 ENSGALG00000000745 1 1 - - - 1.000 - - - - - - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
78. IP3KA IP3KA 4 1 - - - - - 1.000 - - - -
79. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
80. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
81. ABCG1 ENSGALG00000016164 10 1 - - - - - - - 1.000 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
82. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
83. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
84. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
85. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
86. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
87. C8orf22 C8orf22 37 1 - - - - - 1.000 - - - -
88. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
89. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
90. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
91. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
92. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
93. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
94. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
95. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
96. PTPRT ENSGALG00000037889 5 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
97. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
98. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
99. MYO7B ENSGALG00000001936 1 1 - - - 1.000 - - - - - - myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
100. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA