Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN4B

Gene Name Gene ID Reads Annotation
SCN4B ENSGALG00000007409 22 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]











Genes with expression patterns similar to SCN4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN4B ENSGALG00000007409 22 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
2. STAR ENSGALG00000003242 4 2.814 - - - 0.814 - 1.000 - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
3. CUBN ENSGALG00000008704 21 2.639 - - - - 0.803 - 0.836 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
4. PPIL6 ENSGALG00000015237 11 2 - - - - - 1.000 - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
5. ZP2 ENSGALG00000002428 10 1.988 - - 0.988 1.000 - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
6. KNDC1 ENSGALG00000007007 31 1.964 - - 0.964 - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
7. MUT ENSGALG00000016697 43 1.941 - - - - - - 0.941 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
8. COL4A3 ENSGALG00000038612 41 1.941 - - - - - - 0.941 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
9. CBR4 ENSGALG00000009714 7 1.897 - - - - - - - 1.000 - 0.897 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
10. HDAC3 ENSGALG00000002634 130 1.883 - - 0.915 - - 0.968 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
11. SLC6A6 ENSGALG00000006425 31 1.879 - - - - 0.879 - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
12. BLB1 ENSGALG00000000141 13 1.879 - - - - 0.879 - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
13. BMPR1A ENSGALG00000002003 20 1.877 - - 0.877 - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
14. TPTE2 ENSGALG00000017031 29 1.837 - - 0.979 - - 0.858 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
15. ENSGALG00000001138 ENSGALG00000001138 21 1.836 - - - - - - 0.836 1.000 - -
16. PIK3CG ENSGALG00000008081 5 1.836 - - - 1.000 - - 0.836 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
17. CD99L2 ENSGALG00000009075 5 1.83 - - - - 0.830 - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
18. VEPH1 ENSGALG00000009682 51 1.824 - - 0.988 - - - 0.836 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
19. EIF4H ENSGALG00000001313 59 1.776 - - - - - 0.776 - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
20. RBM15 ENSGALG00000000401 22 1.771 - - - - - 0.771 - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
21. LONRF3 ENSGALG00000008860 55 1.761 - - 0.869 - - 0.892 - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
22. STMN2 ENSGALG00000039690 989 1.745 - - - - - 0.745 - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
23. MYO1D ENSGALG00000000674 14 1.731 - - - - - - - 1.000 - 0.731 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
24. CALCA CALCA 682 1.712 - - - - - 0.750 - 0.962 - -
25. ENSGALG00000001478 ENSGALG00000001478 23 1.677 - - - - - - 0.836 - - 0.841
26. ARHGEF18 ENSGALG00000003572 224 1.632 - - 0.765 - - 0.867 - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
27. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
28. PICALM ENSGALG00000039037 57 1 - - - - - - - 1.000 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
29. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
30. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
31. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
32. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
33. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
34. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
35. FRMD4A ENSGALG00000034992 6 1 - - - - - - - 1.000 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
36. TLX3 ENSGALG00000002191 4 1 - - - 1.000 - - - - - - T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532]
37. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
38. HELB ENSGALG00000009885 8 1 - - - - - 1.000 - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
39. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
40. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
41. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
42. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
43. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
44. BAFF BAFF 40 1 - - - - - - - 1.000 - -
45. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
46. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
47. NTRK2 ENSGALG00000012594 24 1 - - - - - 1.000 - - - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
48. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
49. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
50. GPR156 ENSGALG00000014973 4 1 - - - - - 1.000 - - - - G protein-coupled receptor 156, transcript variant X4
51. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
52. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
53. METTL24 ENSGALG00000041120 60 1 - - - 1.000 - - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
54. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
55. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
56. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
57. PIT-1 PIT-1 8 1 - - - 1.000 - - - - - -
58. PRSS55 ENSGALG00000016642 1 1 - - - 1.000 - - - - - - protease, serine 55
59. DNM3 ENSGALG00000033244 6 1 - - - 1.000 - - - - - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
60. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
61. PYROXD2 ENSGALG00000007014 14 1 - - - - - - - 1.000 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
62. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
63. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
64. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
65. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
66. MEX3D ENSGALG00000001106 2 1 - - - - - 1.000 - - - - mex-3 RNA binding family member D, transcript variant X3
67. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
68. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
69. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
70. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
71. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
72. TRAF6 ENSGALG00000007932 12 1 - - - - - - - 1.000 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
73. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
74. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
75. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
76. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
77. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
78. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
79. MST MST 9 1 - - - - - 1.000 - - - -
80. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
81. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
82. BNC1 ENSGALG00000006041 63 1 - - - - - 1.000 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
83. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
84. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
85. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
86. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
87. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
88. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
89. ENSGALG00000021517 ENSGALG00000021517 7 1 - - - 1.000 - - - - - -
90. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
91. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
92. AK7 ENSGALG00000011093 9 1 - - - - - 1.000 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
93. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
94. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
95. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
96. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
97. ENSGALG00000009123 ENSGALG00000009123 9 1 - - - 1.000 - - - - - -
98. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
99. ENSGALG00000000819 ENSGALG00000000819 13 1 - - - 1.000 - - - - - -
100. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA