Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN4B

Gene Name Gene ID Reads Annotation
SCN4B ENSGALG00000007409 22 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]











Genes with expression patterns similar to SCN4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN4B ENSGALG00000007409 22 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
2. STAR ENSGALG00000003242 4 2.814 - - - 0.814 - 1.000 - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
3. CUBN ENSGALG00000008704 21 2.639 - - - - 0.803 - 0.836 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
4. PPIL6 ENSGALG00000015237 11 2 - - - - - 1.000 - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
5. ZP2 ENSGALG00000002428 10 1.988 - - 0.988 1.000 - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
6. KNDC1 ENSGALG00000007007 31 1.964 - - 0.964 - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
7. MUT ENSGALG00000016697 43 1.941 - - - - - - 0.941 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
8. COL4A3 ENSGALG00000038612 41 1.941 - - - - - - 0.941 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
9. CBR4 ENSGALG00000009714 7 1.897 - - - - - - - 1.000 - 0.897 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
10. HDAC3 ENSGALG00000002634 130 1.883 - - 0.915 - - 0.968 - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
11. SLC6A6 ENSGALG00000006425 31 1.879 - - - - 0.879 - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
12. BLB1 ENSGALG00000000141 13 1.879 - - - - 0.879 - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
13. BMPR1A ENSGALG00000002003 20 1.877 - - 0.877 - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
14. TPTE2 ENSGALG00000017031 29 1.837 - - 0.979 - - 0.858 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
15. PIK3CG ENSGALG00000008081 5 1.836 - - - 1.000 - - 0.836 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
16. ENSGALG00000001138 ENSGALG00000001138 21 1.836 - - - - - - 0.836 1.000 - -
17. CD99L2 ENSGALG00000009075 5 1.83 - - - - 0.830 - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
18. VEPH1 ENSGALG00000009682 51 1.824 - - 0.988 - - - 0.836 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
19. EIF4H ENSGALG00000001313 59 1.776 - - - - - 0.776 - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
20. RBM15 ENSGALG00000000401 22 1.771 - - - - - 0.771 - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
21. LONRF3 ENSGALG00000008860 55 1.761 - - 0.869 - - 0.892 - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
22. STMN2 ENSGALG00000039690 989 1.745 - - - - - 0.745 - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
23. MYO1D ENSGALG00000000674 14 1.731 - - - - - - - 1.000 - 0.731 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
24. CALCA CALCA 682 1.712 - - - - - 0.750 - 0.962 - -
25. ENSGALG00000001478 ENSGALG00000001478 23 1.677 - - - - - - 0.836 - - 0.841
26. ARHGEF18 ENSGALG00000003572 224 1.632 - - 0.765 - - 0.867 - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
27. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
28. TG ENSGALG00000039509 19 1 - - - - - 1.000 - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
29. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
30. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
31. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
32. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
33. BNC1 ENSGALG00000006041 63 1 - - - - - 1.000 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
34. ENSGALG00000022810 ENSGALG00000022810 1 1 - - - - - 1.000 - - - -
35. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
36. PTPRT ENSGALG00000037889 5 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
37. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
38. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
39. BAFF BAFF 40 1 - - - - - - - 1.000 - -
40. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
41. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
42. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
43. LOC417973 ENSGALG00000019325 9 1 - - - - - 1.000 - - - - uncharacterized LOC417973, transcript variant X1
44. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
45. RMST RMST 2 1 - - - - - - - 1.000 - -
46. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
47. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
48. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
49. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
50. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
51. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
52. DPF3 ENSGALG00000009352 7 1 - - - 1.000 - - - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
53. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
54. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
55. CAD19 CAD19 17 1 - - - - - 1.000 - - - -
56. MST MST 9 1 - - - - - 1.000 - - - -
57. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
58. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
59. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
60. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
61. MEX3D ENSGALG00000001106 2 1 - - - - - 1.000 - - - - mex-3 RNA binding family member D, transcript variant X3
62. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
63. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
64. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
65. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
66. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
67. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
68. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
69. ENSGALG00000027371 ENSGALG00000027371 1 1 - - - - - 1.000 - - - -
70. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
71. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
72. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
73. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
74. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
75. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
76. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
77. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
78. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
79. LICOS LICOS 13 1 - - - - - - - 1.000 - -
80. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
81. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
82. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
83. CFTII CFTII 6 1 - - - - - - - 1.000 - -
84. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
85. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
86. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
87. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
88. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
89. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
90. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
91. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
92. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
93. PLCD4 ENSGALG00000026687 24 1 - - - - 1.000 - - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
94. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
95. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
96. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
97. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
98. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
99. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
100. gga-mir-218-1 ENSGALG00000018327 3 1 - - - - - - - 1.000 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA