Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN3A

Gene Name Gene ID Reads Annotation
SCN3A ENSGALG00000011040 62 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]











Genes with expression patterns similar to SCN3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN3A ENSGALG00000011040 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
2. RNF215 ENSGALG00000040925 19 1 - - - - - - - 1.000 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
3. PABPN1L ENSGALG00000006242 3 1 - - - - - - - 1.000 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
4. FAM109B 1 1 - - - - - 1.000 - - - - family with sequence similarity 109 member B
5. ST6GAL2 ENSGALG00000016803 24 1 - - - - - 1.000 - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
6. GIPC2 ENSGALG00000008902 6 1 - - - - - - - 1.000 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
7. GALNT10 ENSGALG00000004033 3 1 - - - - - 1.000 - - - - polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
8. C17orf105 C17orf105 11 1 - - - - - - - 1.000 - -
9. ANKRD34B ENSGALG00000044727 9 1 - - - - - 1.000 - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
10. SLC17A8 ENSGALG00000041122 57 1 - - - - - - - 1.000 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
11. ENSGALG00000005960 ENSGALG00000005960 3 1 - - - - - 1.000 - - - -
12. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - 1.000 - -
13. LPGAT1 ENSGALG00000009848 33 1 - - - - - - - 1.000 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
14. ADRA2C ENSGALG00000015608 42 1 - - - - - 1.000 - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
15. ENSGALG00000021838 ENSGALG00000021838 0 1 - - - - - 1.000 - - - -
16. ADAMTS7 7 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
17. PDLIM3 ENSGALG00000013414 52 1 - - - - - 1.000 - - - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
18. ANKRD44 ENSGALG00000007996 17 1 - - - - - 1.000 - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
19. PHF19 ENSGALG00000001595 1 1 - - - - - 1.000 - - - - PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
20. OLFM4 ENSGALG00000016943 7 1 - - - - - - - 1.000 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
21. FNIP1 ENSGALG00000017462 4 1 - - - - - - - 1.000 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
22. LOC395381 ENSGALG00000006717 10 1 - - - - - 1.000 - - - - ovomucin, alpha subunit, transcript variant X4
23. ENSGALG00000001694 ENSGALG00000001694 3 1 - - - - - 1.000 - - - -
24. KLF13 ENSGALG00000026590 13 1 - - - - - 1.000 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
25. SLC15A1 ENSGALG00000016884 10 1 - - - - - 1.000 - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
26. SLCO1B1 ENSGALG00000019276 7 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
27. CMTR1 ENSGALG00000010149 12 1 - - - - - - - 1.000 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
28. BTBD17 ENSGALG00000023359 87 1 - - - - - - - 1.000 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
29. SNORA41 SNORA41 4 1 - - - - - 1.000 - - - -
30. STS ENSGALG00000016622 11 1 - - - - - 1.000 - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
31. IMPG1 ENSGALG00000015897 4 1 - - - - - 1.000 - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
32. CRIP2 ENSGALG00000026471 4 1 - - - - - - - 1.000 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
33. KCTD15 ENSGALG00000004907 8 1 - - - - - 1.000 - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
34. RBP1 ENSGALG00000037875 7 1 - - - - - 1.000 - - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
35. VIL1 ENSGALG00000037286 5 1 - - - - - - - 1.000 - - villin 1 [Source:NCBI gene;Acc:396423]
36. AGBL1 ENSGALG00000006819 7 1 - - - - - 1.000 - - - - ATP/GTP binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:26504]
37. ABHD14A 174 1 - - - - - - - 1.000 - - abhydrolase domain containing 14A
38. SH3BP4 ENSGALG00000004140 4 1 - - - - - - - 1.000 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
39. LURAP1 ENSGALG00000031467 0 1 - - - - - 1.000 - - - - leucine rich adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:32327]
40. TMEM179 ENSGALG00000011590 0 1 - - - - - 1.000 - - - - transmembrane protein 179 [Source:NCBI gene;Acc:423491]
41. KLHL12 ENSGALG00000000518 5 1 - - - - - 1.000 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
42. ENSGALG00000022812 ENSGALG00000022812 0 1 - - - - - 1.000 - - - -
43. D2HGDH ENSGALG00000039535 3 1 - - - - - 1.000 - - - - D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
44. STXBP1 ENSGALG00000040003 157 1 - - - - - 1.000 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
45. TRIM42 ENSGALG00000005286 2 1 - - - - - 1.000 - - - - tripartite motif containing 42 [Source:HGNC Symbol;Acc:HGNC:19014]
46. TRMT61A ENSGALG00000011522 14 1 - - - - - 1.000 - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
47. TOR1BL ENSGALG00000023709 1 1 - - - - - - - 1.000 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
48. THSD7B ENSGALG00000012362 8 1 - - - - - 1.000 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
49. LOC100859850 ENSGALG00000000803 3 1 - - - - - 1.000 - - - - lisH domain-containing protein C1711.05-like
50. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - - - 1.000 - - - -
51. SP5 ENSGALG00000034094 130 1 - - - - - 1.000 - - - - Sp5 transcription factor [Source:NCBI gene;Acc:693261]
52. ATG14 ENSGALG00000012148 2 1 - - - - - 1.000 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]
53. SORCS2 ENSGALG00000015554 7 1 - - - - - 1.000 - - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
54. ECT2 ENSGALG00000009157 31 1 - - - - - - - 1.000 - - epithelial cell transforming 2, transcript variant X7
55. WDR64 ENSGALG00000010760 1 1 - - - - - 1.000 - - - - WD repeat domain 64 [Source:HGNC Symbol;Acc:HGNC:26570]
56. MAVS ENSGALG00000040428 1 1 - - - - - - - 1.000 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
57. SS2R SS2R 3 1 - - - - - 1.000 - - - -
58. PAPPA2 40 1 - - - - - 1.000 - - - - pappalysin 2
59. DYDC1 ENSGALG00000002432 54 1 - - - - - 1.000 - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
60. SLC28A3 ENSGALG00000012593 131 1 - - - - - 1.000 - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
61. SNAPC1 ENSGALG00000011868 65 1 - - - - - - - 1.000 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
62. E2F3 ENSGALG00000012680 21 1 - - - - - 1.000 - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
63. ENSGALG00000016201 ENSGALG00000016201 1 1 - - - - - 1.000 - - - -
64. DLX6 ENSGALG00000023195 29 1 - - - - - 1.000 - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
65. RASGRP1 ENSGALG00000009740 15 1 - - - - - 1.000 - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
66. FSD2 ENSGALG00000005996 2 1 - - - - - 1.000 - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
67. GJA3 ENSGALG00000017137 0 1 - - - - - 1.000 - - - - gap junction protein alpha 3 [Source:NCBI gene;Acc:428084]
68. TROJANZ ENSGALG00000027747 37 1 - - - - - 1.000 - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
69. ICOS ENSGALG00000008656 27 1 - - - - - 1.000 - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
70. ENSGALG00000019428 ENSGALG00000019428 1 1 - - - - - 1.000 - - - -
71. LRIT3 ENSGALG00000026627 6 1 - - - - - 1.000 - - - - leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]
72. KLHL25 ENSGALG00000006826 2 1 - - - - - 1.000 - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
73. NOX2 NOX2 2 1 - - - - - 1.000 - - - -
74. TTC7B ENSGALG00000010680 4 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
75. SPARCL1 ENSGALG00000010929 10 1 - - - - - 1.000 - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
76. TECRL ENSGALG00000038771 126 1 - - - - - 1.000 - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
77. CELSR1 ENSGALG00000043355 19 1 - - - - - - - 1.000 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
78. F13B ENSGALG00000002369 1 1 - - - - - - - 1.000 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
79. ENSGALG00000023460 ENSGALG00000023460 0 1 - - - - - 1.000 - - - -
80. SRGN ENSGALG00000004167 77 1 - - - - - 1.000 - - - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
81. LARGE LARGE 3 1 - - - - - 1.000 - - - -
82. KNDC1 ENSGALG00000007007 31 1 - - - - - 1.000 - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
83. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - 1.000 - -
84. CCDC157 ENSGALG00000007907 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
85. CCDC85C 2 1 - - - - - 1.000 - - - - coiled-coil domain containing 85C, transcript variant X1
86. KLHL33 ENSGALG00000027742 18 1 - - - - - 1.000 - - - - kelch like family member 33, transcript variant X2
87. UPK3A ENSGALG00000014227 7 1 - - - - - - - 1.000 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
88. SCRT2 ENSGALG00000028912 0 1 - - - - - 1.000 - - - - scratch family transcriptional repressor 2 [Source:NCBI gene;Acc:100379662]
89. ENSGALG00000018875 ENSGALG00000018875 6 1 - - - - - - - 1.000 - -
90. ARHGAP39 ENSGALG00000001536 15 1 - - - - - - - 1.000 - - Rho GTPase activating protein 39, transcript variant X2
91. LAG3 ENSGALG00000044449 0 1 - - - - - 1.000 - - - - lymphocyte activating 3, transcript variant X1
92. PROM2 ENSGALG00000041347 6 1 - - - - - 1.000 - - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
93. DPH1 ENSGALG00000003082 5 1 - - - - - 1.000 - - - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
94. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - 1.000 - - - -
95. SLC35A3 12 1 - - - - - - - 1.000 - - solute carrier family 35 member A3, transcript variant X7
96. C11ORF61 C11ORF61 41 1 - - - - - - - 1.000 - -
97. PCGF5 ENSGALG00000006502 2 1 - - - - - 1.000 - - - - polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
98. GAS2L1 ENSGALG00000036731 2 1 - - - - - 1.000 - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
99. GPR183 ENSGALG00000016881 5 1 - - - - - - - 1.000 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
100. RNase RNase 15 1 - - - - - 1.000 - - - -

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA