Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN3A

Gene Name Gene ID Reads Annotation
SCN3A ENSGALG00000011040 62 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]











Genes with expression patterns similar to SCN3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN3A ENSGALG00000011040 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
2. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - 1.000 - -
3. TDRD5 ENSGALG00000033634 40 1 - - - - - 1.000 - - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
4. ENSGALG00000022812 ENSGALG00000022812 0 1 - - - - - 1.000 - - - -
5. DLX6 ENSGALG00000023195 29 1 - - - - - 1.000 - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
6. PAPPA2 40 1 - - - - - 1.000 - - - - pappalysin 2
7. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - 1.000 - - - -
8. SI ENSGALG00000009511 5 1 - - - - - - - 1.000 - - sucrase-isomaltase
9. SRGN ENSGALG00000004167 77 1 - - - - - 1.000 - - - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
10. STS ENSGALG00000016622 11 1 - - - - - 1.000 - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
11. GPR183 ENSGALG00000016881 5 1 - - - - - - - 1.000 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
12. GRK7 ENSGALG00000002800 0 1 - - - - - - - 1.000 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
13. GAL9 GAL9 1 1 - - - - - - - 1.000 - -
14. CCDC85C 2 1 - - - - - 1.000 - - - - coiled-coil domain containing 85C, transcript variant X1
15. ENSGALG00000019864 ENSGALG00000019864 4 1 - - - - - 1.000 - - - -
16. PRA1 PRA1 2 1 - - - - - 1.000 - - - -
17. MEGF11 ENSGALG00000007631 0 1 - - - - - 1.000 - - - - multiple EGF like domains 11 [Source:HGNC Symbol;Acc:HGNC:29635]
18. HHIPL2 ENSGALG00000045729 9 1 - - - - - - - 1.000 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
19. FSD2 ENSGALG00000005996 2 1 - - - - - 1.000 - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
20. WDR64 ENSGALG00000010760 1 1 - - - - - 1.000 - - - - WD repeat domain 64 [Source:HGNC Symbol;Acc:HGNC:26570]
21. IGJ IGJ 26 1 - - - - - 1.000 - - - -
22. C11ORF61 C11ORF61 41 1 - - - - - - - 1.000 - -
23. LOC100859850 ENSGALG00000000803 3 1 - - - - - 1.000 - - - - lisH domain-containing protein C1711.05-like
24. LURAP1 ENSGALG00000031467 0 1 - - - - - 1.000 - - - - leucine rich adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:32327]
25. ANKRD44 ENSGALG00000007996 17 1 - - - - - 1.000 - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
26. PFKFB2 ENSGALG00000001117 2 1 - - - - - 1.000 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
27. CNTNAP4 ENSGALG00000023179 13 1 - - - - - 1.000 - - - - contactin associated protein like 4
28. ANKRD34B ENSGALG00000044727 9 1 - - - - - 1.000 - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
29. UPK3A ENSGALG00000014227 7 1 - - - - - - - 1.000 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
30. VDHAP ENSGALG00000010417 9 1 - - - - - - - 1.000 - - vitamin D3 hydroxylase associated protein [Source:NCBI gene;Acc:395824]
31. SLC17A8 ENSGALG00000041122 57 1 - - - - - - - 1.000 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
32. LAG3 ENSGALG00000044449 0 1 - - - - - 1.000 - - - - lymphocyte activating 3, transcript variant X1
33. E2F3 ENSGALG00000012680 21 1 - - - - - 1.000 - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
34. SNAPC1 ENSGALG00000011868 65 1 - - - - - - - 1.000 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
35. KNDC1 ENSGALG00000007007 31 1 - - - - - 1.000 - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
36. SNTN ENSGALG00000007288 0 1 - - - - - 1.000 - - - - sentan, cilia apical structure protein [Source:NCBI gene;Acc:416076]
37. CCDC157 ENSGALG00000007907 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
38. MAPK8IP1 2 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
39. SPARCL1 ENSGALG00000010929 10 1 - - - - - 1.000 - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
40. ADAMTS7 7 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
41. GRID2 ENSGALG00000010397 6 1 - - - - - - - 1.000 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
42. CNNM2 ENSGALG00000008160 3 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
43. ENSGALG00000001694 ENSGALG00000001694 3 1 - - - - - 1.000 - - - -
44. AGBL1 ENSGALG00000006819 7 1 - - - - - 1.000 - - - - ATP/GTP binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:26504]
45. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - - - 1.000 - - - -
46. C17orf105 C17orf105 11 1 - - - - - - - 1.000 - -
47. CMTR1 ENSGALG00000010149 12 1 - - - - - - - 1.000 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
48. ENSGALG00000016201 ENSGALG00000016201 1 1 - - - - - 1.000 - - - -
49. KREMEN1 ENSGALG00000005808 5 1 - - - - - - - 1.000 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
50. CRIP2 ENSGALG00000026471 4 1 - - - - - - - 1.000 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
51. KLHL33 ENSGALG00000027742 18 1 - - - - - 1.000 - - - - kelch like family member 33, transcript variant X2
52. D2HGDH ENSGALG00000039535 3 1 - - - - - 1.000 - - - - D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
53. GALNT10 ENSGALG00000004033 3 1 - - - - - 1.000 - - - - polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
54. SP5 ENSGALG00000034094 130 1 - - - - - 1.000 - - - - Sp5 transcription factor [Source:NCBI gene;Acc:693261]
55. OLFM4 ENSGALG00000016943 7 1 - - - - - - - 1.000 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
56. MLH1 ENSGALG00000039169 19 1 - - - - - - - 1.000 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
57. GAS2L1 ENSGALG00000036731 2 1 - - - - - 1.000 - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
58. KLF13 ENSGALG00000026590 13 1 - - - - - 1.000 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
59. MAVS ENSGALG00000040428 1 1 - - - - - - - 1.000 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
60. ENSGALG00000021838 ENSGALG00000021838 0 1 - - - - - 1.000 - - - -
61. SORCS2 ENSGALG00000015554 7 1 - - - - - 1.000 - - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
62. SLC15A1 ENSGALG00000016884 10 1 - - - - - 1.000 - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
63. GIPC2 ENSGALG00000008902 6 1 - - - - - - - 1.000 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
64. SCRT2 ENSGALG00000028912 0 1 - - - - - 1.000 - - - - scratch family transcriptional repressor 2 [Source:NCBI gene;Acc:100379662]
65. ENSGALG00000023460 ENSGALG00000023460 0 1 - - - - - 1.000 - - - -
66. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - 1.000 - -
67. FAM109B 1 1 - - - - - 1.000 - - - - family with sequence similarity 109 member B
68. TOR1BL ENSGALG00000023709 1 1 - - - - - - - 1.000 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
69. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - 1.000 - - - -
70. KCTD15 ENSGALG00000004907 8 1 - - - - - 1.000 - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
71. KLHL12 ENSGALG00000000518 5 1 - - - - - 1.000 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
72. PROM2 ENSGALG00000041347 6 1 - - - - - 1.000 - - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
73. TTC7B ENSGALG00000010680 4 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
74. ATG14 ENSGALG00000012148 2 1 - - - - - 1.000 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]
75. VPS29L ENSGALG00000005951 31 1 - - - - - 1.000 - - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
76. SLC28A3 ENSGALG00000012593 131 1 - - - - - 1.000 - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
77. LARGE LARGE 3 1 - - - - - 1.000 - - - -
78. LPGAT1 ENSGALG00000009848 33 1 - - - - - - - 1.000 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
79. EML5 ENSGALG00000010639 25 1 - - - - - 1.000 - - - - echinoderm microtubule associated protein like 5, transcript variant X1
80. BTBD17 ENSGALG00000023359 87 1 - - - - - - - 1.000 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
81. RBP1 ENSGALG00000037875 7 1 - - - - - 1.000 - - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
82. GGGT5L ENSGALG00000013762 0 1 - - - - - 1.000 - - - - protein-glutamine gamma-glutamyltransferase 5-like
83. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - 1.000 - - - -
84. LRRTM1 ENSGALG00000015967 85 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
85. SLCO1B1 ENSGALG00000019276 7 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
86. ABHD14A 174 1 - - - - - - - 1.000 - - abhydrolase domain containing 14A
87. ECT2 ENSGALG00000009157 31 1 - - - - - - - 1.000 - - epithelial cell transforming 2, transcript variant X7
88. EFHC2 ENSGALG00000016221 8 1 - - - - - - - 1.000 - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
89. KLHL25 ENSGALG00000006826 2 1 - - - - - 1.000 - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
90. RNase RNase 15 1 - - - - - 1.000 - - - -
91. RASGRP1 ENSGALG00000009740 15 1 - - - - - 1.000 - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
92. THSD7B ENSGALG00000012362 8 1 - - - - - 1.000 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
93. ENSGALG00000005960 ENSGALG00000005960 3 1 - - - - - 1.000 - - - -
94. ENSGALG00000019428 ENSGALG00000019428 1 1 - - - - - 1.000 - - - -
95. VIL1 ENSGALG00000037286 5 1 - - - - - - - 1.000 - - villin 1 [Source:NCBI gene;Acc:396423]
96. STEAP2 ENSGALG00000009017 10 1 - - - - - 1.000 - - - - STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
97. IMPG1 ENSGALG00000015897 4 1 - - - - - 1.000 - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
98. PHF19 ENSGALG00000001595 1 1 - - - - - 1.000 - - - - PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
99. STXBP1 ENSGALG00000040003 157 1 - - - - - 1.000 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
100. SERPING1 ENSGALG00000007381 144 1 - - - - - - - 1.000 - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA