Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCN3A

Gene Name Gene ID Reads Annotation
SCN3A ENSGALG00000011040 62 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]











Genes with expression patterns similar to SCN3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN3A ENSGALG00000011040 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
2. GPR183 ENSGALG00000016881 5 1 - - - - - - - 1.000 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
3. FNIP1 ENSGALG00000017462 4 1 - - - - - - - 1.000 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
4. LAG3 ENSGALG00000044449 0 1 - - - - - 1.000 - - - - lymphocyte activating 3, transcript variant X1
5. RBP1 ENSGALG00000037875 7 1 - - - - - 1.000 - - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
6. DLX6 ENSGALG00000023195 29 1 - - - - - 1.000 - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
7. HHIPL2 ENSGALG00000045729 9 1 - - - - - - - 1.000 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
8. ADAMTS7 7 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
9. LRRTM1 ENSGALG00000015967 85 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
10. ANKRD44 ENSGALG00000007996 17 1 - - - - - 1.000 - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
11. GRID2 ENSGALG00000010397 6 1 - - - - - - - 1.000 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
12. CCDC85C 2 1 - - - - - 1.000 - - - - coiled-coil domain containing 85C, transcript variant X1
13. GALNT10 ENSGALG00000004033 3 1 - - - - - 1.000 - - - - polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
14. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - 1.000 - - - -
15. STXBP1 ENSGALG00000040003 157 1 - - - - - 1.000 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
16. KNDC1 ENSGALG00000007007 31 1 - - - - - 1.000 - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
17. KLF13 ENSGALG00000026590 13 1 - - - - - 1.000 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
18. CELSR1 ENSGALG00000043355 19 1 - - - - - - - 1.000 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
19. SLC28A3 ENSGALG00000012593 131 1 - - - - - 1.000 - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
20. SNAPC1 ENSGALG00000011868 65 1 - - - - - - - 1.000 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
21. THSD7B ENSGALG00000012362 8 1 - - - - - 1.000 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
22. TRMT61A ENSGALG00000011522 14 1 - - - - - 1.000 - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
23. SNTN ENSGALG00000007288 0 1 - - - - - 1.000 - - - - sentan, cilia apical structure protein [Source:NCBI gene;Acc:416076]
24. LOC395381 ENSGALG00000006717 10 1 - - - - - 1.000 - - - - ovomucin, alpha subunit, transcript variant X4
25. SS2R SS2R 3 1 - - - - - 1.000 - - - -
26. ARHGAP39 ENSGALG00000001536 15 1 - - - - - - - 1.000 - - Rho GTPase activating protein 39, transcript variant X2
27. FAM109B 1 1 - - - - - 1.000 - - - - family with sequence similarity 109 member B
28. CNTNAP4 ENSGALG00000023179 13 1 - - - - - 1.000 - - - - contactin associated protein like 4
29. GJA3 ENSGALG00000017137 0 1 - - - - - 1.000 - - - - gap junction protein alpha 3 [Source:NCBI gene;Acc:428084]
30. EFHC2 ENSGALG00000016221 8 1 - - - - - - - 1.000 - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
31. LURAP1 ENSGALG00000031467 0 1 - - - - - 1.000 - - - - leucine rich adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:32327]
32. ENSGALG00000005960 ENSGALG00000005960 3 1 - - - - - 1.000 - - - -
33. KLHL12 ENSGALG00000000518 5 1 - - - - - 1.000 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
34. MAVS ENSGALG00000040428 1 1 - - - - - - - 1.000 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
35. SI ENSGALG00000009511 5 1 - - - - - - - 1.000 - - sucrase-isomaltase
36. MEGF11 ENSGALG00000007631 0 1 - - - - - 1.000 - - - - multiple EGF like domains 11 [Source:HGNC Symbol;Acc:HGNC:29635]
37. GAL9 GAL9 1 1 - - - - - - - 1.000 - -
38. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - - - 1.000 - - - -
39. SPARCL1 ENSGALG00000010929 10 1 - - - - - 1.000 - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
40. STS ENSGALG00000016622 11 1 - - - - - 1.000 - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
41. SCRT2 ENSGALG00000028912 0 1 - - - - - 1.000 - - - - scratch family transcriptional repressor 2 [Source:NCBI gene;Acc:100379662]
42. GGGT5L ENSGALG00000013762 0 1 - - - - - 1.000 - - - - protein-glutamine gamma-glutamyltransferase 5-like
43. LPGAT1 ENSGALG00000009848 33 1 - - - - - - - 1.000 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
44. VPS29L ENSGALG00000005951 31 1 - - - - - 1.000 - - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
45. VIL1 ENSGALG00000037286 5 1 - - - - - - - 1.000 - - villin 1 [Source:NCBI gene;Acc:396423]
46. OLFM4 ENSGALG00000016943 7 1 - - - - - - - 1.000 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
47. MAPK8IP1 2 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
48. KLHL25 ENSGALG00000006826 2 1 - - - - - 1.000 - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
49. PAPPA2 40 1 - - - - - 1.000 - - - - pappalysin 2
50. UPK3A ENSGALG00000014227 7 1 - - - - - - - 1.000 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
51. EML5 ENSGALG00000010639 25 1 - - - - - 1.000 - - - - echinoderm microtubule associated protein like 5, transcript variant X1
52. ENSGALG00000018875 ENSGALG00000018875 6 1 - - - - - - - 1.000 - -
53. IMPG1 ENSGALG00000015897 4 1 - - - - - 1.000 - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
54. ENSGALG00000022812 ENSGALG00000022812 0 1 - - - - - 1.000 - - - -
55. GRK7 ENSGALG00000002800 0 1 - - - - - - - 1.000 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
56. SERPING1 ENSGALG00000007381 144 1 - - - - - - - 1.000 - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
57. PCGF5 ENSGALG00000006502 2 1 - - - - - 1.000 - - - - polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
58. SLC35A3 12 1 - - - - - - - 1.000 - - solute carrier family 35 member A3, transcript variant X7
59. ENSGALG00000021838 ENSGALG00000021838 0 1 - - - - - 1.000 - - - -
60. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - 1.000 - - - -
61. TOR1BL ENSGALG00000023709 1 1 - - - - - - - 1.000 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
62. AGBL1 ENSGALG00000006819 7 1 - - - - - 1.000 - - - - ATP/GTP binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:26504]
63. ST6GAL2 ENSGALG00000016803 24 1 - - - - - 1.000 - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
64. SLCO1B1 ENSGALG00000019276 7 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
65. GIPC2 ENSGALG00000008902 6 1 - - - - - - - 1.000 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
66. RNF215 ENSGALG00000040925 19 1 - - - - - - - 1.000 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
67. SLC17A8 ENSGALG00000041122 57 1 - - - - - - - 1.000 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
68. KCTD15 ENSGALG00000004907 8 1 - - - - - 1.000 - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
69. BTBD17 ENSGALG00000023359 87 1 - - - - - - - 1.000 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
70. PFKFB2 ENSGALG00000001117 2 1 - - - - - 1.000 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
71. SH3BP4 ENSGALG00000004140 4 1 - - - - - - - 1.000 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
72. C11ORF61 C11ORF61 41 1 - - - - - - - 1.000 - -
73. GABRA2 ENSGALG00000014206 19 1 - - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
74. IGJ IGJ 26 1 - - - - - 1.000 - - - -
75. F13B ENSGALG00000002369 1 1 - - - - - - - 1.000 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
76. CNNM2 ENSGALG00000008160 3 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
77. LOC100859850 ENSGALG00000000803 3 1 - - - - - 1.000 - - - - lisH domain-containing protein C1711.05-like
78. DPH1 ENSGALG00000003082 5 1 - - - - - 1.000 - - - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
79. TTC7B ENSGALG00000010680 4 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
80. CCDC157 ENSGALG00000007907 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
81. ENSGALG00000019428 ENSGALG00000019428 1 1 - - - - - 1.000 - - - -
82. TROJANZ ENSGALG00000027747 37 1 - - - - - 1.000 - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
83. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - 1.000 - - - -
84. SORCS2 ENSGALG00000015554 7 1 - - - - - 1.000 - - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
85. RBL2 ENSGALG00000003663 10 1 - - - - - 1.000 - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
86. C17orf105 C17orf105 11 1 - - - - - - - 1.000 - -
87. RNase RNase 15 1 - - - - - 1.000 - - - -
88. ADRA2C ENSGALG00000015608 42 1 - - - - - 1.000 - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
89. ECT2 ENSGALG00000009157 31 1 - - - - - - - 1.000 - - epithelial cell transforming 2, transcript variant X7
90. PROM2 ENSGALG00000041347 6 1 - - - - - 1.000 - - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
91. E2F3 ENSGALG00000012680 21 1 - - - - - 1.000 - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
92. VDHAP ENSGALG00000010417 9 1 - - - - - - - 1.000 - - vitamin D3 hydroxylase associated protein [Source:NCBI gene;Acc:395824]
93. TRIM42 ENSGALG00000005286 2 1 - - - - - 1.000 - - - - tripartite motif containing 42 [Source:HGNC Symbol;Acc:HGNC:19014]
94. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - 1.000 - -
95. ATG14 ENSGALG00000012148 2 1 - - - - - 1.000 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]
96. CMTR1 ENSGALG00000010149 12 1 - - - - - - - 1.000 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
97. ENSGALG00000019864 ENSGALG00000019864 4 1 - - - - - 1.000 - - - -
98. KREMEN1 ENSGALG00000005808 5 1 - - - - - - - 1.000 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
99. TECRL ENSGALG00000038771 126 1 - - - - - 1.000 - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
100. ENSGALG00000023460 ENSGALG00000023460 0 1 - - - - - 1.000 - - - -

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA