Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN2A

Gene Name Gene ID Reads Annotation
SCN2A ENSGALG00000011009 15 sodium voltage-gated channel alpha subunit 2 [Source:NCBI gene;Acc:395945]











Genes with expression patterns similar to SCN2A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN2A ENSGALG00000011009 15 4 - - 1.000 1.000 1.000 - - - - 1.000 sodium voltage-gated channel alpha subunit 2 [Source:NCBI gene;Acc:395945]
2. TBXA2R ENSGALG00000037888 24 1.51 - - - 0.790 0.720 - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
3. OLFM4 ENSGALG00000016943 7 1 - - - 1.000 - - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
4. DSE ENSGALG00000014963 70 0.948 - - - - 0.948 - - - - - dermatan sulfate epimerase, transcript variant X1
5. ZDHHC16 ENSGALG00000007592 19 0.948 - - - - 0.948 - - - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
6. SEC23IP ENSGALG00000009466 29 0.948 - - - - 0.948 - - - - - SEC23 interacting protein [Source:HGNC Symbol;Acc:HGNC:17018]
7. ENSGALG00000028964 ENSGALG00000028964 46 0.948 - - - - 0.948 - - - - -
8. EGF ENSGALG00000012155 8 0.948 - - - - 0.948 - - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
9. MBLAC2 ENSGALG00000014649 16 0.948 - - - - 0.948 - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
10. PIM3 ENSGALG00000023576 30 0.948 - - - - 0.948 - - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:19310]
11. TRIM13 ENSGALG00000017011 92 0.922 - - - - 0.922 - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
12. CLCN6 ENSGALG00000004590 3 0.913 - - - 0.913 - - - - - - chloride voltage-gated channel 6 [Source:NCBI gene;Acc:419488]
13. ENSGALG00000005960 ENSGALG00000005960 3 0.913 - - - 0.913 - - - - - -
14. ZFYVE21 ENSGALG00000011534 7 0.913 - - - 0.913 - - - - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
15. ASPA ENSGALG00000004669 10 0.913 - - - 0.913 - - - - - - aspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]
16. EPHA2 ENSGALG00000039895 12 0.913 - - - 0.913 - - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
17. ZNF330 ENSGALG00000009868 257 0.913 - - - 0.913 - - - - - - zinc finger protein 330 [Source:NCBI gene;Acc:422453]
18. PSMD4 ENSGALG00000028505 16 0.913 - - - 0.913 - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
19. SNORA44 SNORA44 29 0.913 - - - 0.913 - - - - - -
20. ESR1 ENSGALG00000012973 3 0.913 - - - 0.913 - - - - - - estrogen receptor 1 [Source:NCBI gene;Acc:396099]
21. MAPKAPK3 ENSGALG00000002283 30 0.904 - - - 0.904 - - - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
22. PTPRO ENSGALG00000013085 26 0.903 - - - 0.903 - - - - - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
23. ARSA ENSGALG00000035824 299 0.894 - - - 0.894 - - - - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
24. MAST3 ENSGALG00000003499 21 0.89 - - - - 0.890 - - - - - microtubule associated serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:19036]
25. RALGPS1_1 ENSGALG00000000906 7 0.883 - - - 0.883 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
26. TPTE2 ENSGALG00000017031 29 0.883 - - - - 0.883 - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
27. VTG1 ENSGALG00000039354 17 0.874 - - - 0.874 - - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
28. FAR1 ENSGALG00000005353 12 0.868 - - - 0.868 - - - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
29. ATG7 ENSGALG00000004932 8 0.863 - - - - 0.863 - - - - - autophagy related 7 [Source:NCBI gene;Acc:415961]
30. U6atac U6atac 44 0.862 - - - 0.862 - - - - - -
31. FCHSD1 ENSGALG00000002622 6 0.86 - - - - 0.860 - - - - - FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:HGNC:25463]
32. FABP1 ENSGALG00000015937 12 0.858 - - - - 0.858 - - - - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
33. PODN ENSGALG00000021869 71 0.857 - - - - - - - - - 0.857 podocan [Source:HGNC Symbol;Acc:HGNC:23174]
34. BST1 ENSGALG00000014509 12 0.852 - - - - 0.852 - - - - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
35. KCNT2 ENSGALG00000041680 36 0.843 - - - - 0.843 - - - - - potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
36. RASSF7 ENSGALG00000044251 8 0.835 - - - - 0.835 - - - - - Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
37. ENSGALG00000020719 ENSGALG00000020719 25 0.834 - - - 0.834 - - - - - -
38. PIK3C3 ENSGALG00000035773 52 0.83 - - - 0.830 - - - - - - phosphatidylinositol 3-kinase catalytic subunit type 3 [Source:HGNC Symbol;Acc:HGNC:8974]
39. AJAP1 ENSGALG00000027265 11 0.825 - - - - 0.825 - - - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
40. FSTL4 ENSGALG00000031487 529 0.823 - - - 0.823 - - - - - - follistatin like 4 [Source:NCBI gene;Acc:395163]
41. DCP1A 22 0.822 - - - - 0.822 - - - - - decapping mRNA 1A, transcript variant X3
42. MAPK11 ENSGALG00000040023 15 0.821 - - - 0.821 - - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
43. MLH1 ENSGALG00000039169 19 0.82 - - - - 0.820 - - - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
44. ENSGALG00000022662 ENSGALG00000022662 17 0.819 - - 0.819 - - - - - - -
45. MASP2 ENSGALG00000003016 35 0.819 - - 0.819 - - - - - - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
46. KCND2 ENSGALG00000009066, ENSGALG00000043515 63 0.816 - - - - 0.816 - - - - - potassium voltage-gated channel subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:6238]
47. SOD3 ENSGALG00000018557 16 0.81 - - - 0.810 - - - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
48. GPR97 GPR97 16 0.806 - - - 0.806 - - - - - -
49. SNX25 ENSGALG00000010610 31 0.803 - - - 0.803 - - - - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
50. TMEFF2 ENSGALG00000007759 93 0.798 - - - - 0.798 - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
51. KCNB2 ENSGALG00000031693 31 0.796 - - - 0.796 - - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
52. SLC30A9 ENSGALG00000031415 36 0.796 - - - 0.796 - - - - - - solute carrier family 30 member 9
53. PLN ENSGALG00000027583 419 0.792 - - - 0.792 - - - - - - phospholamban [Source:NCBI gene;Acc:396378]
54. ENSGALG00000013110 ENSGALG00000013110 51 0.791 - - - 0.791 - - - - - -
55. CERKL ENSGALG00000008910 70 0.787 - - - 0.787 - - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
56. FBXO11 ENSGALG00000008944 95 0.778 - - - 0.778 - - - - - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
57. INPP4A ENSGALG00000029709 48 0.775 - - - - 0.775 - - - - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
58. FNDC4 ENSGALG00000016507 55 0.773 - - - - 0.773 - - - - - Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318412]
59. LOC426743 ENSGALG00000001242 248 0.771 - - - 0.771 - - - - - - probable beta-D-xylosidase 5-like
60. SH2D4B ENSGALG00000002370 10 0.762 - - - - - - - - - 0.762 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
61. FREM1 ENSGALG00000005426 61 0.761 - - - - 0.761 - - - - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
62. PODXL2 ENSGALG00000006009 4 0.76 - - - - - - - - - 0.760 podocalyxin like 2 [Source:HGNC Symbol;Acc:HGNC:17936]
63. B4GALT2 ENSGALG00000010094 36 0.758 - - - - 0.758 - - - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
64. ENSGALG00000012250 ENSGALG00000012250 581 0.752 - - - 0.752 - - - - - -
65. CLDN20 ENSGALG00000027634 25 0.751 - - - 0.751 - - - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
66. CRYBG3 7 0.745 - - 0.745 - - - - - - - crystallin beta-gamma domain containing 3, transcript variant X2
67. MSGN1 ENSGALG00000016469 17 0.742 - - - 0.742 - - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
68. NPAS2 ENSGALG00000016774 48 0.74 - - - 0.740 - - - - - - neuronal PAS domain protein 2 [Source:NCBI gene;Acc:395433]
69. ABCA1 ENSGALG00000015433 11 0.737 - - - - - - - - - 0.737 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
70. SLC35B3 ENSGALG00000012778 30 0.736 - - - - - - - - - 0.736 solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
71. CHADL ENSGALG00000011970 42 0.732 - - - - 0.732 - - - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
72. CAMK2A ENSGALG00000005621 3 0.732 - - - - - - - - - 0.732 calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
73. ENSGALG00000020376 ENSGALG00000020376 36 0.731 - - 0.731 - - - - - - -
74. IGFBP3 ENSGALG00000037940 852 0.731 - - - 0.731 - - - - - - insulin like growth factor binding protein 3 [Source:NCBI gene;Acc:420790]
75. FLVCR1 ENSGALG00000009807 21 0.727 - - - - 0.727 - - - - - feline leukemia virus subgroup C cellular receptor 1 [Source:HGNC Symbol;Acc:HGNC:24682]
76. CHRND ENSGALG00000007899 55 0.725 - - - - 0.725 - - - - - cholinergic receptor nicotinic delta subunit [Source:NCBI gene;Acc:424940]
77. PLCL1 ENSGALG00000008113 23 0.722 - - - 0.722 - - - - - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
78. ENSGALG00000009487 ENSGALG00000009487 1 0.719 - - - - - - - - - 0.719
79. ENSGALG00000024286 ENSGALG00000024286 2 0.719 - - - - - - - - - 0.719
80. FOSL2 ENSGALG00000010036 3 0.719 - - - - - - - - - 0.719 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
81. C6orf58 ENSGALG00000045522 2 0.719 - - - - - - - - - 0.719 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
82. ENSGALG00000004619 ENSGALG00000004619 3 0.719 - - - - - - - - - 0.719
83. ESR2 ENSGALG00000011801 7 0.719 - - - - - - - - - 0.719 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
84. TRIM36 ENSGALG00000008188 1 0.719 - - - - - - - - - 0.719 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
85. ACOT1L ENSGALG00000008752 6 0.719 - - - - - - - - - 0.719 acyl-CoA thioesterase 1-like
86. RS1 ENSGALG00000016523 11 0.719 - - - - - - - - - 0.719 retinoschisin 1 [Source:NCBI gene;Acc:772315]
87. RUFY4 2 0.719 - - - - - - - - - 0.719 RUN and FYVE domain containing 4, transcript variant X5
88. C8B ENSGALG00000010853 21 0.719 - - - - - - - - - 0.719 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
89. EXOC6B ENSGALG00000016098 3 0.719 - - - - - - - - - 0.719 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
90. CAMTA1 ENSGALG00000039525 1 0.719 - - - - - - - - - 0.719 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
91. TTC29 ENSGALG00000010009 4 0.719 - - - - - - - - - 0.719 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
92. GRAMD2 GRAMD2 3 0.719 - - - - - - - - - 0.719
93. SNX13 ENSGALG00000010840 13 0.719 - - - - - - - - - 0.719 sorting nexin 13 [Source:NCBI gene;Acc:420598]
94. gga-mir-22 ENSGALG00000024507 2 0.719 - - - - - - - - - 0.719 gga-mir-22 [Source:miRBase;Acc:MI0006982]
95. ENSGALG00000026496 ENSGALG00000026496 9 0.719 - - - - - - - - - 0.719
96. IFN-GAMMA IFN-GAMMA 1 0.719 - - - - - - - - - 0.719
97. POLR3G ENSGALG00000014650 7 0.719 - - - - - - - - - 0.719 RNA polymerase III subunit G, transcript variant X2
98. RBL2 ENSGALG00000003663 10 0.719 - - - - - - - - - 0.719 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
99. NT5E ENSGALG00000015833 5 0.719 - - - - - - - - - 0.719 5'-nucleotidase ecto
100. RAB9B ENSGALG00000004918 2 0.719 - - - - - - - - - 0.719 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA