Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCMH1

Gene Name Gene ID Reads Annotation
SCMH1 ENSGALG00000000672 3 Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]











Genes with expression patterns similar to SCMH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCMH1 ENSGALG00000000672 3 4 - - 1.000 1.000 - 1.000 - - - 1.000 Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
2. B3GALNT1 1 2 - - 1.000 - - - - - - 1.000 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), transcript variant X14
3. MTMR11 ENSGALG00000035923 1 2 - - - - - 1.000 - - - 1.000 myotubularin related protein 11 [Source:HGNC Symbol;Acc:HGNC:24307]
4. CDO1 ENSGALG00000002358 74 2 - - 1.000 - - 1.000 - - - - cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]
5. SYNJ1 ENSGALG00000034317 7 1.925 - - - 0.925 - 1.000 - - - - synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]
6. ENSGALG00000009209 ENSGALG00000009209 6 1.766 - - 1.000 - - 0.766 - - - -
7. CTRB2 ENSGALG00000000038 6 1.706 - - 0.706 - - - - - - 1.000 chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
8. ENSGALG00000014620 ENSGALG00000014620 7 1.505 - - - - - 0.751 - - - 0.754
9. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - - - - 1.000 zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
10. KIAA0247 KIAA0247 10 1 - - 1.000 - - - - - - -
11. ABHD2 ENSGALG00000006689 29 1 - - - - - 1.000 - - - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
12. TRIM41 ENSGALG00000030569 5 1 - - - - - 1.000 - - - - tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
13. GUCA1C ENSGALG00000015364 1 1 - - 1.000 - - - - - - - guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
14. DOK6 ENSGALG00000013753 2 1 - - 1.000 - - - - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
15. VIT ENSGALG00000010583 16 1 - - - - - 1.000 - - - - vitrin [Source:NCBI gene;Acc:421471]
16. ZC2HC1B 15 1 - - - - - 1.000 - - - - zinc finger C2HC-type containing 1B
17. SNORD98 SNORD98 1 1 - - - - - - - - - 1.000
18. SCN5A ENSGALG00000006112 137 1 - - - - - 1.000 - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
19. MTMR3 ENSGALG00000008051 9 1 - - - - - - - - - 1.000 myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
20. ENSGALG00000016493 ENSGALG00000016493 2 1 - - - - - 1.000 - - - -
21. CTSD ENSGALG00000006613 4 1 - - 1.000 - - - - - - - cathepsin D [Source:NCBI gene;Acc:396090]
22. PFN4 ENSGALG00000019866 53 1 - - 1.000 - - - - - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
23. DRD5 ENSGALG00000014975 1 1 - - - - - 1.000 - - - - dopamine receptor D5 [Source:HGNC Symbol;Acc:HGNC:3026]
24. NLGN3 ENSGALG00000005553 4 1 - - 1.000 - - - - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
25. HEPHL1 ENSGALG00000043027 14 1 - - - - - - - - - 1.000 hephaestin like 1 [Source:HGNC Symbol;Acc:HGNC:30477]
26. ENSGALG00000026544 ENSGALG00000026544 1 1 - - - - - 1.000 - - - -
27. PLA2G5 ENSGALG00000018977 0 1 - - - - - 1.000 - - - - phospholipase A2 group V [Source:NCBI gene;Acc:771655]
28. ENSGALG00000028269 ENSGALG00000028269 1 1 - - - - - - - - - 1.000
29. MEP1A ENSGALG00000033033 2 1 - - - - - 1.000 - - - - meprin A subunit alpha [Source:NCBI gene;Acc:422060]
30. ENSGALG00000011567 ENSGALG00000011567 2 1 - - - - - 1.000 - - - -
31. FAM237A ENSGALG00000020836 21 1 - - - - - 1.000 - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
32. MID2 ENSGALG00000003860 3 1 - - - 1.000 - - - - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
33. FEM1A ENSGALG00000004168 14 1 - - - - - 1.000 - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
34. ADAMTS8 ENSGALG00000001370 0 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
35. ATP6V1A ENSGALG00000014800 4 1 - - - - - - - - - 1.000 ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
36. WDR86 ENSGALG00000019690 113 1 - - - - - 1.000 - - - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]
37. DNER ENSGALG00000002958 3 1 - - - - - 1.000 - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
38. ENSGALG00000005785 ENSGALG00000005785 1570 1 - - 1.000 - - - - - - -
39. NR3C1 ENSGALG00000032992 4 1 - - - - - - - - - 1.000 nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
40. PAH ENSGALG00000012754 15 1 - - - - - 1.000 - - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
41. SNORA35 SNORA35 0 1 - - - - - 1.000 - - - -
42. AIM1 51 1 - - - - - 1.000 - - - - absent in melanoma 1, transcript variant X2
43. SYTL2L ENSGALG00000008326 5 1 - - - - - 1.000 - - - - synaptotagmin-like protein 2-like, transcript variant X4
44. PLAGL2 ENSGALG00000006586 3 1 - - - - - 1.000 - - - - PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
45. CREB3L3 ENSGALG00000001252 1 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 like 3 [Source:HGNC Symbol;Acc:HGNC:18855]
46. NR2E1 ENSGALG00000015305 3 1 - - - - - 1.000 - - - - nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:396082]
47. RASGEF1C ENSGALG00000006076 1 1 - - - - - - - - - 1.000 RasGEF domain family member 1C [Source:NCBI gene;Acc:416296]
48. SPIA5 ENSGALG00000020390 0 1 - - - - - 1.000 - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5, transcript variant X1
49. ASB18 ENSGALG00000046564 7 1 - - - - - 1.000 - - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
50. AUTS2 ENSGALG00000001153 24 1 - - - - - 1.000 - - - - AUTS2, activator of transcription and developmental regulator [Source:HGNC Symbol;Acc:HGNC:14262]
51. ENSGALG00000027704 ENSGALG00000027704 2 1 - - - - - - - - - 1.000
52. CPNE4 ENSGALG00000029235 32 1 - - - - - 1.000 - - - - copine 4 [Source:HGNC Symbol;Acc:HGNC:2317]
53. ENSGALG00000026657 ENSGALG00000026657 4 1 - - - - - 1.000 - - - -
54. SPEG ENSGALG00000043198 2 1 - - - - - - - - - 1.000 SPEG complex locus, transcript variant X12
55. SEMA4G ENSGALG00000026957 11 1 - - - 1.000 - - - - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
56. ENSGALG00000015429 ENSGALG00000015429 34 1 - - - - - 1.000 - - - -
57. ENSGALG00000014502 ENSGALG00000014502 2 1 - - - - - 1.000 - - - -
58. Sep-04 Sep-04 1 1 - - 1.000 - - - - - - -
59. ADAM5P ENSGALG00000009606 31 1 - - 1.000 - - - - - - - ADAM metallopeptidase domain 5, pseudogene, transcript variant X5
60. KLC4 ENSGALG00000030384 154 1 - - - 1.000 - - - - - - kinesin light chain 4, transcript variant X5
61. PPP1R9A 4 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 9A, transcript variant X6
62. TMEM184B ENSGALG00000012272 1 1 - - 1.000 - - - - - - - transmembrane protein 184B [Source:NCBI gene;Acc:418027]
63. SNX19 ENSGALG00000001425 2 1 - - - - - - - - - 1.000 sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
64. DSCAM ENSGALG00000016138 16 1 - - - - - 1.000 - - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
65. FAM46D 22 1 - - - - - 1.000 - - - - family with sequence similarity 46 member D
66. GRM8 ENSGALG00000039403 17 1 - - - - - 1.000 - - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
67. AQP12 AQP12 11 1 - - - - - 1.000 - - - -
68. ANKFN1 ENSGALG00000003105 15 1 - - 1.000 - - - - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
69. AK8 ENSGALG00000040923 10 1 - - 1.000 - - - - - - - adenylate kinase 8, transcript variant X1
70. ENSGALG00000009151 ENSGALG00000009151 6 1 - - - - - 1.000 - - - -
71. SLC16A3 ENSGALG00000002728 323 1 - - - - - 1.000 - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
72. SS4R SS4R 19 1 - - - - - - - - - 1.000
73. MCOLN2 ENSGALG00000008722 33 1 - - - - - 1.000 - - - - mucolipin 2 [Source:HGNC Symbol;Acc:HGNC:13357]
74. CDK6 ENSGALG00000009476 17 1 - - - - - 1.000 - - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
75. AVP ENSGALG00000014117 19 1 - - - - - 1.000 - - - - arginine vasopressin [Source:NCBI gene;Acc:396101]
76. GPRIN2 ENSGALG00000002048 17 1 - - - - - - - - - 1.000 G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
77. LOC769668 ENSGALG00000021450 31 1 - - - - - - - - - 1.000 estradiol 17-beta-dehydrogenase 2-like
78. B9D1 ENSGALG00000005096 760 1 - - - - - - - - - 1.000 B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
79. EAF1 ENSGALG00000033379 3 1 - - 1.000 - - - - - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
80. IL1R2 ENSGALG00000046326 1 1 - - - - - - - - - 1.000 interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]
81. ENSGALG00000013327 ENSGALG00000013327 16 1 - - - - - 1.000 - - - -
82. RBP3 ENSGALG00000005978 1 1 - - - - - - - - - 1.000 retinol binding protein 3 [Source:NCBI gene;Acc:395553]
83. MFSD4 MFSD4 1 1 - - - - - - - - - 1.000
84. TRPS1 ENSGALG00000031700 39 1 - - - - - 1.000 - - - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
85. ENSGALG00000023100 ENSGALG00000023100 12 1 - - 1.000 - - - - - - -
86. MYH13 4 1 - - - 1.000 - - - - - - myosin, heavy chain 13, skeletal muscle
87. NCAM2 ENSGALG00000015737 5 1 - - - - - 1.000 - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
88. CDK5R2 ENSGALG00000025729 1 1 - - - - - - - - - 1.000 cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]
89. CDH9 ENSGALG00000012923 10 1 - - - - - 1.000 - - - - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
90. PPAP2C PPAP2C 1 1 - - - - - 1.000 - - - -
91. CDC42EP1 ENSGALG00000038556 3 1 - - 1.000 - - - - - - - CDC42 effector protein 1 [Source:HGNC Symbol;Acc:HGNC:17014]
92. RGS6 ENSGALG00000009368 19 1 - - - - - 1.000 - - - - regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
93. ITPRIP ENSGALG00000025780 4 1 - - - 1.000 - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
94. CTLA4 ENSGALG00000008666 5 1 - - - - - - - - - 1.000 cytotoxic T-lymphocyte associated protein 4 [Source:NCBI gene;Acc:424106]
95. WDR16 WDR16 22 1 - - 1.000 - - - - - - -
96. SNORD95 SNORD95 6 1 - - - - - 1.000 - - - -
97. AGTR2 ENSGALG00000005936 3 1 - - - - - - - - - 1.000 angiotensin II receptor type 2 [Source:HGNC Symbol;Acc:HGNC:338]
98. SOCS1B SOCS1B 1 1 - - 1.000 - - - - - - -
99. CNP3 CNP3 10 1 - - - 1.000 - - - - - -
100. NR0B2 ENSGALG00000000887 2 1 - - - - - - - - - 1.000 nuclear receptor subfamily 0 group B member 2 [Source:NCBI gene;Acc:768353]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA