Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCLT1

Gene Name Gene ID Reads Annotation
SCLT1 2397 sodium channel and clathrin linker 1, transcript variant X6











Genes with expression patterns similar to SCLT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCLT1 2397 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel and clathrin linker 1, transcript variant X6
2. SQLE ENSGALG00000036915 4172 1.806 - - - - - - 0.837 0.969 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
3. NECAP1 ENSGALG00000037656 5181 1.765 - - - - - - 0.776 0.989 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
4. KIAA0895L 1739 1 - - - - - - - 1.000 - - KIAA0895 like, transcript variant X4
5. CARKD CARKD 2914 1 - - - - - - - 1.000 - -
6. GGA3 ENSGALG00000007992 3566 1 - - - - - - - 1.000 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
7. FXN ENSGALG00000015108 1867 1 - - - - - - - 1.000 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
8. MADD ENSGALG00000008181 2273 1 - - - - - - - 1.000 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
9. RNF113A ENSGALG00000000538 3985 0.999 - - - - - - - 0.999 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
10. RRN3 ENSGALG00000041989 3934 0.999 - - - - - - - 0.999 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
11. UBALD1 ENSGALG00000007619 8536 0.999 - - - - - - - 0.999 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
12. YTHDC2 2266 0.999 - - - - - - - 0.999 - - YTH domain containing 2, transcript variant X3
13. FAM125B FAM125B 2953 0.999 - - - - - - - 0.999 - -
14. HBXIP HBXIP 8637 0.999 - - - - - - - 0.999 - -
15. JKAMP ENSGALG00000012009 5781 0.999 - - - - - - - 0.999 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
16. PDCD2L 4843 0.999 - - - - - - - 0.999 - - programmed cell death 2-like
17. ENSGALG00000010034 ENSGALG00000010034 3293 0.999 - - - - - - - 0.999 - -
18. NPFF1 NPFF1 3177 0.999 - - - - - - - 0.999 - -
19. ATL1 ENSGALG00000012339 3789 0.998 - - - - - - - 0.998 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
20. TMTC2 ENSGALG00000010975 7040 0.998 - - - - - - - 0.998 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
21. EIF3D ENSGALG00000012529 40887 0.997 - - - - - - - 0.997 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
22. CHMP5 ENSGALG00000013160 13347 0.997 - - - - - - - 0.997 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
23. RIC8A ENSGALG00000004191 6094 0.997 - - - - - - - 0.997 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
24. DDX24 ENSGALG00000010884 5485 0.997 - - - - - - - 0.997 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
25. PGM1 ENSGALG00000011016 3391 0.997 - - - - - - - 0.997 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
26. RBFA ENSGALG00000036067 6542 0.997 - - - - - - - 0.997 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
27. CHTOP ENSGALG00000042129 24112 0.991 - - - - - - - 0.991 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
28. CASP3 ENSGALG00000010638 11572 0.99 - - - - - - - 0.990 - - caspase 3 [Source:NCBI gene;Acc:395476]
29. ARHGAP11A ENSGALG00000009731 6817 0.989 - - - - - - - 0.989 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
30. MMADHC ENSGALG00000012473 9026 0.987 - - - - - - - 0.987 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
31. NDUFA2 ENSGALG00000040626 27899 0.978 - - - - - - - 0.978 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
32. MRPS17 ENSGALG00000002379 30243 0.972 - - - - - - - 0.972 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
33. NOC4L ENSGALG00000002272 9644 0.97 - - - - - - - 0.970 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
34. PRKG1 ENSGALG00000003805 4654 0.967 - - - - - - - 0.967 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
35. SMC3 ENSGALG00000008585 16618 0.966 - - - - - - - 0.966 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
36. BSDC1 ENSGALG00000003405 3701 0.963 - - - - - - - 0.963 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
37. CENPP ENSGALG00000004687 6707 0.955 - - - - - - - 0.955 - - centromere protein P [Source:NCBI gene;Acc:415952]
38. GCLM ENSGALG00000005782 15789 0.954 - - - - - - - 0.954 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
39. COL4A6 ENSGALG00000008266 6374 0.933 - - - - - - - 0.933 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
40. ALYREF ENSGALG00000007237 48479 0.93 - - - - - - - 0.930 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
41. MBNL1 ENSGALG00000029190 3953 0.923 - - - - - - 0.923 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
42. RBL1 ENSGALG00000001332 2568 0.905 - - - - - - 0.905 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
43. IFT74 ENSGALG00000001801 1932 0.903 - - - - - - 0.903 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
44. UTP11L UTP11L 11927 0.902 - - - - - - - 0.902 - -
45. DIEXF ENSGALG00000009887 4782 0.896 - - - - - - 0.896 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
46. MORC3 ENSGALG00000036556 2976 0.889 - - - - - - 0.889 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
47. IDI1 ENSGALG00000006723 7761 0.889 - - - - - - 0.889 - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
48. PALD1 ENSGALG00000004465 3553 0.886 - - - - - - 0.886 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
49. PEX6 ENSGALG00000045514 4582 0.885 - - - - - - 0.885 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
50. HMGN2 HMGN2 158543 0.884 - - - - - - - 0.884 - -
51. BMI1 ENSGALG00000041267 6618 0.884 - - - - - - 0.884 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
52. RCAN3 ENSGALG00000004282 7778 0.884 - - - - - - 0.884 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
53. FN3KRP ENSGALG00000028979 4160 0.88 - - - - - - 0.880 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
54. SEC11A ENSGALG00000037553 32123 0.879 - - - - - - - 0.879 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
55. CCDC59 ENSGALG00000028648 9272 0.879 - - - - - - - 0.879 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
56. EIF3I ENSGALG00000003337 28832 0.875 - - - - - - 0.875 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
57. SRPK1 ENSGALG00000037546 1849 0.872 - - - - - - 0.872 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
58. SUGP1 ENSGALG00000042132 2771 0.869 - - - - - - 0.869 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
59. MPST ENSGALG00000040840 2122 0.869 - - - - - - 0.869 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
60. CNOT10 ENSGALG00000011494 2614 0.867 - - - - - - 0.867 - - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
61. EFNB2 ENSGALG00000029175 5664 0.867 - - - - - - 0.867 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
62. ZCCHC2 ENSGALG00000012889 3163 0.866 - - - - - - 0.866 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
63. PGAP2 ENSGALG00000027762 2583 0.864 - - - - - - 0.864 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
64. CMSS1 ENSGALG00000015267 2954 0.864 - - - - - - 0.864 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
65. NPHP4 ENSGALG00000000966 1698 0.862 - - - - - - 0.862 - - - nephrocystin 4, transcript variant X5
66. RBM34 ENSGALG00000029915 5618 0.86 - - - - - - 0.860 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
67. USP54 ENSGALG00000005232 2749 0.859 - - - - - - 0.859 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
68. WDR47 ENSGALG00000002129 2624 0.859 - - - - - - 0.859 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
69. GAS2 ENSGALG00000003655 2672 0.858 - - - - - - 0.858 - - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
70. SMAD5 ENSGALG00000006309 1748 0.857 - - - - - - 0.857 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
71. HELLS ENSGALG00000005451 7094 0.856 - - - - - - 0.856 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
72. COPS8 ENSGALG00000033385 10166 0.855 - - - - - - 0.855 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
73. PIK3IP1 ENSGALG00000006942 8388 0.854 - - - - - - - 0.854 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
74. COQ5 ENSGALG00000007185 5614 0.854 - - - - - - 0.854 - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
75. CDC73 ENSGALG00000002469 4586 0.852 - - - - - - 0.852 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
76. HYOU1 ENSGALG00000007659 3555 0.851 - - - - - - 0.851 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
77. ZYX ENSGALG00000014688 8686 0.85 - - - - - - 0.850 - - - zyxin [Source:NCBI gene;Acc:418300]
78. PITX2 ENSGALG00000042492 20419 0.85 - - - - - - - 0.850 - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
79. PMPCB ENSGALG00000008280 6357 0.849 - - - - - - 0.849 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
80. AP1M1 ENSGALG00000003959 31761 0.849 - - - - - - - 0.849 - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
81. MBNL2 ENSGALG00000016890 3162 0.849 - - - - - - 0.849 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
82. WIPI1 ENSGALG00000004215 3359 0.849 - - - - - - 0.849 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
83. LYAR ENSGALG00000015000 10756 0.848 - - - - - - 0.848 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
84. MAPRE1 ENSGALG00000006657 64346 0.847 - - - - - - - 0.847 - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
85. SELT SELT 25524 0.846 - - - - - - - 0.846 - -
86. RNASEH1 ENSGALG00000016389 2694 0.846 - - - - - - 0.846 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
87. LZTFL1 ENSGALG00000033928 3493 0.845 - - - - - - 0.845 - - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
88. SUN1 ENSGALG00000003781 3442 0.844 - - - - - - 0.844 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
89. PAPD7 ENSGALG00000013061 2031 0.843 - - - - - - 0.843 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
90. FAM193A ENSGALG00000015667 3075 0.843 - - - - - - 0.843 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
91. PRPS1 ENSGALG00000004908 27994 0.842 - - - - - - - 0.842 - - phosphoribosyl pyrophosphate synthetase 1
92. RFT1 ENSGALG00000001945 2446 0.84 - - - - - - 0.840 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
93. MRPL10 ENSGALG00000014387 12386 0.838 - - - - - - 0.838 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
94. PARL ENSGALG00000002315 15943 0.837 - - - - - - 0.837 - - - presenilin associated rhomboid like
95. PLCE1 ENSGALG00000039528 151 0.836 - - - - - - 0.836 - - - phospholipase C epsilon 1
96. LONP1 ENSGALG00000040492 7133 0.836 - - - - - - 0.836 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
97. TM9SF4 ENSGALG00000006568 567 0.835 - - - - - - 0.835 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
98. USP8 ENSGALG00000005894 4499 0.834 - - - - - - 0.834 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
99. TOP3B ENSGALG00000030051 5953 0.832 - - - - - - 0.832 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
100. JMJD7 ENSGALG00000026846 1320 0.832 - - - - - - 0.832 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]

There are 251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA