Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCG3

Gene Name Gene ID Reads Annotation
SCG3 ENSGALG00000043583 1247 secretogranin III [Source:NCBI gene;Acc:415424]











Genes with expression patterns similar to SCG3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCG3 ENSGALG00000043583 1247 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secretogranin III [Source:NCBI gene;Acc:415424]
2. DEPDC5 ENSGALG00000006766 1592 1.566 - - - 0.817 - - - 0.749 - - DEP domain containing 5, transcript variant X6
3. SLMO1 SLMO1 4357 1.526 - - - - - - 0.735 - - 0.791
4. NPAS3 ENSGALG00000029022 1950 1.503 - - - - - 0.730 0.773 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
5. GPR89 GPR89 2253 1.503 - - - 0.778 - - 0.725 - - -
6. SYT4 ENSGALG00000042626 384 1.461 - - - - - - - - 0.701 0.760 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
7. SAP130 ENSGALG00000002070 9814 1.435 - - - 0.718 - - 0.717 - - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
8. MCCC2L ENSGALG00000011255 889 0.872 - - - 0.872 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
9. CYP20A1 ENSGALG00000008730 930 0.867 - - - 0.867 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
10. SRSF11 ENSGALG00000011305 10435 0.858 - - - 0.858 - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
11. ENSGALG00000004132 ENSGALG00000004132 9287 0.857 - - - 0.857 - - - - - -
12. KIF6 ENSGALG00000010057 84 0.856 - - - 0.856 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
13. EIF2AK4 ENSGALG00000009611 2164 0.855 - - - 0.855 - - - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
14. MLH3 ENSGALG00000010304 231 0.855 - - - 0.855 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
15. NCOA3 ENSGALG00000004570 243 0.854 - - - 0.854 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
16. SNORA31 SNORA31 183 0.854 - - - 0.854 - - - - - -
17. ENSGALG00000027412 ENSGALG00000027412 202 0.854 - - - 0.854 - - - - - -
18. RGS7BP ENSGALG00000027389 1414 0.852 - - - 0.852 - - - - - - regulator of G protein signaling 7 binding protein [Source:HGNC Symbol;Acc:HGNC:23271]
19. ZBTB17 ENSGALG00000035352 280 0.851 - - - 0.851 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
20. DBN1 ENSGALG00000033405 216 0.851 - - - 0.851 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
21. TGS1 ENSGALG00000015340 5897 0.849 - - - 0.849 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
22. TBK1 ENSGALG00000009840 1650 0.849 - - - 0.849 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
23. NUDT4 ENSGALG00000011285 2998 0.849 - - - 0.849 - - - - - - nudix hydrolase 4, transcript variant X5
24. RNPC3 ENSGALG00000005162 269 0.847 - - - 0.847 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
25. GUF1 ENSGALG00000014217 211 0.847 - - - 0.847 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
26. GFPT2 ENSGALG00000039705 562 0.847 - - - 0.847 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
27. NPL ENSGALG00000004614 617 0.846 - - - 0.846 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
28. TRIM62 ENSGALG00000028437 5124 0.845 - - - 0.845 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
29. C12orf45 C12orf45 2445 0.845 - - - 0.845 - - - - - -
30. PANK1 ENSGALG00000006431 2910 0.844 - - - 0.844 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
31. VWDE ENSGALG00000042443 160 0.844 - - - 0.844 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
32. CA3 CA3 200 0.844 - - - 0.844 - - - - - -
33. ADCY9 ENSGALG00000007779 766 0.843 - - - 0.843 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
34. FRRS1 ENSGALG00000005418 332 0.839 - - - 0.839 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
35. WDR96 WDR96 255 0.839 - - - 0.839 - - - - - -
36. LRRCC1 ENSGALG00000039499 480 0.839 - - - 0.839 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
37. KIAA1432 KIAA1432 1792 0.838 - - - 0.838 - - - - - -
38. VPS13B 2293 0.837 - - - 0.837 - - - - - - vacuolar protein sorting 13 homolog B
39. GTF3C4 ENSGALG00000031016 1221 0.835 - - - 0.835 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
40. HPS5 ENSGALG00000027716 2466 0.833 - - - 0.833 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
41. ELMOD1 ENSGALG00000017169 2303 0.831 - - - 0.831 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
42. PRKD1 ENSGALG00000009900 2094 0.83 - - - 0.830 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
43. ASRGL1 ENSGALG00000015949 403 0.83 - - - 0.830 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
44. C17H9ORF114 C17H9ORF114 2500 0.829 - - - 0.829 - - - - - -
45. ITGA9 ENSGALG00000029378 415 0.825 - - - 0.825 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
46. UTP18 ENSGALG00000002985 7129 0.825 - - - 0.825 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
47. DHRS11 ENSGALG00000005403 2936 0.825 - - - 0.825 - - - - - - dehydrogenase/reductase 11 [Source:NCBI gene;Acc:395172]
48. DLL1 ENSGALG00000011182 1613 0.824 - - - - - - - 0.824 - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
49. OVCA2 ENSGALG00000045371 2862 0.823 - - - 0.823 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
50. MRPL40 ENSGALG00000001587 20893 0.822 - - - 0.822 - - - - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
51. OFD1 ENSGALG00000016576 1916 0.822 - - - - - - 0.822 - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
52. BAG5 ENSGALG00000031062 4498 0.821 - - - 0.821 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
53. PRDM4 ENSGALG00000012619 876 0.821 - - - 0.821 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
54. DPY30 ENSGALG00000010621 6818 0.821 - - - 0.821 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
55. ENTPD4 ENSGALG00000000390 1394 0.82 - - - 0.820 - - - - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
56. ZBTB16 ENSGALG00000038540 5544 0.819 - - - 0.819 - - - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
57. DBNDD2 ENSGALG00000003921 8301 0.818 - - - 0.818 - - - - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
58. CUL5 ENSGALG00000017165 2480 0.818 - - - 0.818 - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
59. NCF1 ENSGALG00000001189 334 0.818 - - - - - - - 0.818 - - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
60. HINT3 ENSGALG00000044342 5674 0.817 - - - 0.817 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
61. ASCC1 ENSGALG00000026019 3583 0.815 - - - 0.815 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
62. PFKL ENSGALG00000006543 4361 0.815 - - - 0.815 - - - - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
63. UBALD1 ENSGALG00000007619 8536 0.814 - - - 0.814 - - - - - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
64. PPFIA1 ENSGALG00000035774 5258 0.814 - - - 0.814 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
65. MFSD2A ENSGALG00000003879 5455 0.814 - - - 0.814 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
66. RSBN1 ENSGALG00000001860 761 0.814 - - - 0.814 - - - - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
67. PASK ENSGALG00000006016 3096 0.813 - - - 0.813 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
68. IFT43 ENSGALG00000020415 1218 0.813 - - - 0.813 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
69. COPA ENSGALG00000009153 11618 0.813 - - - 0.813 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
70. NECAB3 ENSGALG00000003065 417 0.812 - - - 0.812 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
71. HDHD3 ENSGALG00000044101 6333 0.812 - - - 0.812 - - - - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
72. TMOD1 ENSGALG00000002125 933 0.81 - - - 0.810 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
73. MRPS30 ENSGALG00000014874 3416 0.809 - - - 0.809 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
74. RBFOX1 ENSGALG00000034325 2133 0.809 - - - 0.809 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
75. NUP205 ENSGALG00000011662 4157 0.809 - - - 0.809 - - - - - - nucleoporin 205
76. CDON ENSGALG00000035419 2240 0.809 - - - 0.809 - - - - - - cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17104]
77. ITPKB ENSGALG00000009068 324 0.808 - - - 0.808 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
78. PDE4B ENSGALG00000011094 1871 0.808 - - - 0.808 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
79. SLC27A4 ENSGALG00000004965 3278 0.807 - - - 0.807 - - - - - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
80. CHCHD3 ENSGALG00000006489 18592 0.807 - - - 0.807 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
81. MOSPD1 ENSGALG00000006132 8503 0.807 - - - 0.807 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
82. CHM ENSGALG00000006906 4953 0.806 - - - 0.806 - - - - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
83. UTP3 ENSGALG00000011553 8814 0.806 - - - 0.806 - - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
84. WHSC2 WHSC2 3673 0.804 - - - - - - 0.804 - - -
85. NDUFAF6 ENSGALG00000040366 1647 0.803 - - - 0.803 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
86. KIAA1143 ENSGALG00000035952 6735 0.801 - - - 0.801 - - - - - - KIAA1143 [Source:NCBI gene;Acc:420709]
87. LARS ENSGALG00000007494 13966 0.801 - - - 0.801 - - - - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
88. ARIH1 ENSGALG00000001901 2033 0.8 - - - 0.800 - - - - - - ariadne RBR E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:415319]
89. TMEFF1 ENSGALG00000013212 4222 0.799 - - - 0.799 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1
90. KCNK5 ENSGALG00000034077 3233 0.799 - - - 0.799 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
91. SLC39A9 ENSGALG00000009438 4838 0.798 - - - 0.798 - - - - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
92. ENSGALG00000023608 ENSGALG00000023608 1538 0.798 - - - 0.798 - - - - - -
93. AKT1 ENSGALG00000011620 4089 0.798 - - - 0.798 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
94. CXorf23 1582 0.797 - - - 0.797 - - - - - - chromosome X open reading frame 23, transcript variant X3
95. METTL21A ENSGALG00000008493 3188 0.797 - - - 0.797 - - - - - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
96. KIAA1462 1612 0.797 - - - 0.797 - - - - - - KIAA1462, transcript variant X4
97. NME6 ENSGALG00000038044 1231 0.795 - - - 0.795 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
98. GLRX3 ENSGALG00000010464 22578 0.795 - - - 0.795 - - - - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
99. PHF6 ENSGALG00000006094 1748 0.795 - - - 0.795 - - - - - - PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]
100. ABCD2 ENSGALG00000042554 1607 0.795 - - - 0.795 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]

There are 217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA