Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCFD2

Gene Name Gene ID Reads Annotation
SCFD2 ENSDARG00000040005, ENSDARG00000116272 1 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]










Genes with expression patterns similar to SCFD2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SCFD2 ENSDARG00000040005, ENSDARG00000116272 1 1 - - 1.000 - - - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
2. pde4d ENSDARG00000032761 8 0.941 - - 0.941 - - - - - - phosphodiesterase 4D, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-081105-16]
3. psmb11 psmb11 5 0.941 - - 0.941 - - - - - -
4. si:ch211-161n3.3 ENSDARG00000092989 9 0.941 - - 0.941 - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
5. adh8a ENSDARG00000091211, ENSDARG00000113750 19 0.941 - - 0.941 - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
6. CR352328.3 CR352328.3 9 0.936 - - 0.936 - - - - - -
7. LPHN2_1 LPHN2_1 3 0.887 - - 0.887 - - - - - -
8. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 0.876 - - 0.876 - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
9. tagln ENSDARG00000045408 48 0.875 - - 0.875 - - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
10. ENSDARG00000086653 ENSDARG00000086653 14 0.875 - - 0.875 - - - - - -
11. KCNQ4 ENSDARG00000089490 1 0.875 - - 0.875 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-120215-132]
12. si:dkey-11e23.3 si:dkey-11e23.3 3 0.875 - - 0.875 - - - - - -
13. si:dkey-13n15.11 ENSDARG00000078002 8 0.875 - - 0.875 - - - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
14. THBD ENSDARG00000092470 1 0.875 - - 0.875 - - - - - - thrombomodulin [Source:ZFIN;Acc:ZDB-GENE-110411-281]
15. si:ch211-255f4.11 ENSDARG00000102099, ENSDARG00000117185 2 0.875 - - 0.875 - - - - - - si:ch211-255f4.11 [Source:ZFIN;Acc:ZDB-GENE-050208-387]
16. si:ch211-106h4.4 ENSDARG00000093629 9 0.875 - - 0.875 - - - - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
17. znf804b ENSDARG00000103396 11 0.875 - - 0.875 - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
18. si:rp71-68n21.9 ENSDARG00000067751 7 0.875 - - 0.875 - - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
19. TNPO1 ENSDARG00000035390 1 0.875 - - 0.875 - - - - - - transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
20. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.875 - - 0.875 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
21. allc ENSDARG00000042562 12 0.875 - - 0.875 - - - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
22. BX571823.1 BX571823.1 2 0.875 - - 0.875 - - - - - -
23. serinc2l ENSDARG00000053425 5 0.875 - - 0.875 - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
24. CR759920.1 CR759920.1 4 0.875 - - 0.875 - - - - - -
25. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 0.875 - - 0.875 - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
26. si:dkey-287f10.2 si:dkey-287f10.2 3 0.875 - - 0.875 - - - - - -
27. FAM120B ENSDARG00000030804 1 0.875 - - 0.875 - - - - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
28. CABZ01102040.1 CABZ01102040.1 1 0.875 - - 0.875 - - - - - -
29. CABZ01053592.1 ENSDARG00000117388 6 0.875 - - 0.875 - - - - - -
30. GABRA3 ENSDARG00000090883 5 0.875 - - 0.875 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
31. BX927369.2 BX927369.2 9 0.875 - - 0.875 - - - - - -
32. ptgfr ENSDARG00000074016 1 0.875 - - 0.875 - - - - - - prostaglandin F receptor (FP) [Source:ZFIN;Acc:ZDB-GENE-120919-6]
33. si:dkey-11o1.2 ENSDARG00000095772 1 0.875 - - 0.875 - - - - - - si:dkey-11o1.2 [Source:ZFIN;Acc:ZDB-GENE-100921-76]
34. ttc25 ENSDARG00000058140 2 0.875 - - 0.875 - - - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
35. BX276122.1 BX276122.1 1 0.875 - - 0.875 - - - - - -
36. fars2 ENSDARG00000091247 1 0.875 - - 0.875 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
37. pcsk5a ENSDARG00000067537 44 0.875 - - 0.875 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
38. CABZ01031738.1 CABZ01031738.1 1 0.875 - - 0.875 - - - - - -
39. rgs9a ENSDARG00000037925 3 0.875 - - 0.875 - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
40. si:dkey-27f16.4 si:dkey-27f16.4 4 0.875 - - 0.875 - - - - - -
41. HTR7 17 0.875 - - 0.875 - - - - - - 5-hydroxytryptamine receptor 7
42. PEG3_24 PEG3_24 5 0.875 - - 0.875 - - - - - -
43. cacna1aa ENSDARG00000037905 4 0.875 - - 0.875 - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
44. si:dkey-13m3.2 ENSDARG00000103424 15 0.875 - - 0.875 - - - - - - si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
45. CPEB4_1 CPEB4_1 1 0.875 - - 0.875 - - - - - -
46. LRFN4_1 LRFN4_1 5 0.875 - - 0.875 - - - - - -
47. BX005294.1 ENSDARG00000101338 1 0.875 - - 0.875 - - - - - -
48. znf1112 ENSDARG00000095997 2 0.875 - - 0.875 - - - - - - zinc finger protein 1112 [Source:ZFIN;Acc:ZDB-GENE-110913-179]
49. CR388164.2 ENSDARG00000096885 1 0.875 - - 0.875 - - - - - -
50. cep170b ENSDARG00000074636 4 0.875 - - 0.875 - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
51. LBH ENSDARG00000111701 1 0.875 - - 0.875 - - - - - - limb bud and heart development [Source:ZFIN;Acc:ZDB-GENE-040426-1613]
52. CABZ01115881.1 ENSDARG00000086539 2 0.875 - - 0.875 - - - - - - SH2 domain containing 3A [Source:NCBI gene;Acc:100331568]
53. si:ch211-267j24.2 si:ch211-267j24.2 7 0.875 - - 0.875 - - - - - -
54. CABZ01059421.1 CABZ01059421.1 1 0.875 - - 0.875 - - - - - -
55. si:ch73-92e20.2 si:ch73-92e20.2 2 0.875 - - 0.875 - - - - - -
56. si:dkey-281i15.9 si:dkey-281i15.9 1 0.875 - - 0.875 - - - - - -
57. MYO7B MYO7B 8 0.875 - - 0.875 - - - - - -
58. CABZ01048675.1 CABZ01048675.1 4 0.875 - - 0.875 - - - - - -
59. ighd ENSDARG00000096248 1 0.875 - - 0.875 - - - - - - immunoglobulin heavy constant delta [Source:ZFIN;Acc:ZDB-GENE-040513-9]
60. si:dkeyp-41f9.3 ENSDARG00000075600 2 0.875 - - 0.875 - - - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
61. CU984579.1 ENSDARG00000116863 15 0.875 - - 0.875 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
62. pdzrn3a ENSDARG00000073757 1 0.875 - - 0.875 - - - - - - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
63. PHKA1 PHKA1 10 0.875 - - 0.875 - - - - - -
64. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.875 - - 0.875 - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
65. zgc:194659 ENSDARG00000079347 17 0.875 - - 0.875 - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
66. sh3bp1 ENSDARG00000078119 5 0.875 - - 0.875 - - - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
67. itih6 ENSDARG00000056037 3 0.875 - - 0.875 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
68. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 0.875 - - 0.875 - - - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
69. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.875 - - 0.875 - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
70. si:dkey-114b16.5 si:dkey-114b16.5 5 0.875 - - 0.875 - - - - - -
71. RGS13 ENSDARG00000100835 29 0.873 - - 0.873 - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
72. ctrl ENSDARG00000068680 18 0.871 - - 0.871 - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
73. st6galnac1.2 ENSDARG00000043816 51 0.866 - - 0.866 - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
74. si:ch211-79g12.1 ENSDARG00000116692 2 0.866 - - 0.866 - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
75. ca10b ENSDARG00000009568 8 0.866 - - 0.866 - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
76. itln1 ENSDARG00000007534 8 0.863 - - 0.863 - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
77. si:ch73-155e10.1 si:ch73-155e10.1 13 0.859 - - 0.859 - - - - - -
78. si:dkey-247i3.1 ENSDARG00000076252 11 0.856 - - 0.856 - - - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
79. chd5 ENSDARG00000105083 132 0.835 - - 0.835 - - - - - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
80. si:ch211-209l18.4 ENSDARG00000090847 1 0.831 - - 0.831 - - - - - - si:ch211-209l18.4 [Source:ZFIN;Acc:ZDB-GENE-110411-221]
81. stoml3b ENSDARG00000057035 15 0.831 - - 0.831 - - - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
82. akap8l ENSDARG00000099635 2 0.831 - - 0.831 - - - - - - A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]
83. myo5b_1 ENSDARG00000062003 6 0.831 - - 0.831 - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
84. im:6903943 im:6903943 26 0.831 - - 0.831 - - - - - -
85. si:dkey-81i14.3 si:dkey-81i14.3 1 0.831 - - 0.831 - - - - - -
86. znf536 ENSDARG00000103648 6 0.828 - - 0.828 - - - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
87. BIN1 BIN1 11 0.825 - - 0.825 - - - - - -
88. BX682558.1 ENSDARG00000101975 30 0.823 - - 0.823 - - - - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
89. pkp1a ENSDARG00000090598 6 0.823 - - 0.823 - - - - - - plakophilin 1a [Source:ZFIN;Acc:ZDB-GENE-110411-77]
90. ptger2a ENSDARG00000011434 6 0.823 - - 0.823 - - - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
91. si:dkey-264f17.1 ENSDARG00000100219 1 0.823 - - 0.823 - - - - - - si:dkey-264f17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-6]
92. mylk3 ENSDARG00000076348 19 0.823 - - 0.823 - - - - - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
93. NACC1 NACC1 9 0.823 - - 0.823 - - - - - -
94. rtel1 ENSDARG00000035074 17 0.81 - - 0.810 - - - - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
95. gfra1a ENSDARG00000099732 33 0.809 - - 0.809 - - - - - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
96. CU104697.1 CU104697.1 19 0.809 - - 0.809 - - - - - -
97. si:ch211-10p21.1 si:ch211-10p21.1 6 0.809 - - 0.809 - - - - - -
98. aspscr1_1 ENSDARG00000105321 4 0.809 - - 0.809 - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
99. TMC2 TMC2 5 0.803 - - 0.803 - - - - - -
100. si:ch211-67e16.3 ENSDARG00000078193 11 0.803 - - 0.803 - - - - - - si:ch211-67e16.3 [Source:ZFIN;Acc:ZDB-GENE-070912-310]

There are 44 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA