Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCFD1

Gene Name Gene ID Reads Annotation
SCFD1 ENSGALG00000009916 5756 sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]











Genes with expression patterns similar to SCFD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCFD1 ENSGALG00000009916 5756 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
2. ORC4 ENSGALG00000012448 8405 2.3 - - - - 0.804 - 0.704 0.792 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
3. MOSPD1 ENSGALG00000006132 8503 1.68 - - - - 0.834 - 0.846 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
4. CTNNBL1 ENSGALG00000006817 6765 1.624 - - - - 0.779 - - 0.845 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
5. DPP7 ENSGALG00000038145 4888 1.618 - - - - 0.827 - - 0.791 - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
6. CDC16 ENSGALG00000016816 2162 1.579 - - - - 0.821 - - 0.758 - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
7. ACP6 ENSGALG00000015485 3147 1.578 - - - - 0.865 - - 0.713 - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
8. PPP1CC ENSGALG00000004571 14748 1.575 - - - - 0.818 - 0.757 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
9. ARPC1A ENSGALG00000004693 11583 1.559 - - - - 0.752 - 0.807 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
10. PRMT10 PRMT10 1169 1.55 - - - - 0.827 - - 0.723 - -
11. RNF219 ENSGALG00000016911 4458 1.539 - - - - - - 0.765 0.774 - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
12. RIT1 ENSGALG00000014647 7174 1.536 - - - - - - 0.775 0.761 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
13. FAM178A FAM178A 2738 1.534 - - - - 0.722 - - 0.812 - -
14. UTP14A ENSGALG00000024039 8532 1.533 - - - - 0.785 - - 0.748 - - UTP14A small subunit processome component
15. SDF2L1 ENSGALG00000031982 6084 1.533 - - - - - - 0.774 0.759 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
16. MRPL47 ENSGALG00000013759 9044 1.531 - - - - 0.766 - - 0.765 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
17. UFD1L 12964 1.52 - - - - 0.716 - 0.804 - - - ubiquitin fusion degradation 1 like (yeast)
18. UTP18 ENSGALG00000002985 7129 1.511 - - - - 0.804 - - 0.707 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
19. CANX ENSGALG00000032148 11297 1.482 - - - - 0.762 - 0.720 - - - calnexin [Source:NCBI gene;Acc:416288]
20. MRPL2 ENSGALG00000008597 16500 1.48 - - - - 0.778 - - 0.702 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
21. DERL1 ENSGALG00000033950 15074 1.479 - - 0.717 - - - 0.762 - - - derlin 1 [Source:NCBI gene;Acc:420350]
22. NCBP2_1 ENSGALG00000006843 7170 1.473 - - - - 0.718 - - 0.755 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
23. SYS1 ENSGALG00000003929 4487 1.468 - - - - - - 0.721 0.747 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
24. MRPS22 ENSGALG00000005367 8307 1.463 - - - - 0.739 - - 0.724 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
25. SLMO2 SLMO2 9207 1.462 - - - - - - 0.721 0.741 - -
26. RRP1B ENSGALG00000035696 12309 1.455 - - - - - - 0.726 0.729 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
27. NUP37 ENSGALG00000012759 9985 1.454 - - - - - - 0.723 0.731 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
28. NUBPL ENSGALG00000009983 3328 1.449 - - - - 0.708 - - 0.741 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
29. R3HCC1 ENSGALG00000036854 1882 1.446 - - - - 0.730 - - 0.716 - - R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]
30. PMPCB ENSGALG00000008280 6357 1.441 - - - - 0.713 - 0.728 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
31. CPOX ENSGALG00000015240 5292 1.421 - - - - - - 0.709 0.712 - - coproporphyrinogen oxidase
32. RCN2 ENSGALG00000039284 17848 1.411 - - - - - - 0.706 0.705 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
33. SCARB2 ENSGALG00000011499 2763 0.89 - - - - 0.890 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
34. LYPLA1 ENSGALG00000040421 14720 0.881 - - - - - - 0.881 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
35. XPO1 ENSGALG00000029476 9526 0.869 - - - - - - 0.869 - - - exportin 1 [Source:NCBI gene;Acc:421192]
36. CACYBP ENSGALG00000004554 7320 0.864 - - - - - - 0.864 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
37. CSPP1 1756 0.864 - - - - 0.864 - - - - - centrosome and spindle pole associated protein 1
38. SPSB3 ENSGALG00000002285 1329 0.862 - - - - 0.862 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
39. RNF126 ENSGALG00000042948 4724 0.859 - - - - 0.859 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
40. RIOK3 ENSGALG00000015004 4249 0.858 - - - - 0.858 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
41. ENSGALG00000006865 ENSGALG00000006865 307 0.854 - - - - 0.854 - - - - -
42. STON2 ENSGALG00000010579 76 0.854 - - - - 0.854 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
43. APLP2 ENSGALG00000001250 22253 0.854 - - - - - - 0.854 - - - amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
44. CCDC6 ENSGALG00000003165 93 0.854 - - - - 0.854 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
45. GLT8D1 ENSGALG00000001642 4232 0.854 - - - - 0.854 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
46. WDR70 ENSGALG00000003708 5835 0.853 - - - - - - 0.853 - - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
47. ENSGALG00000001591 ENSGALG00000001591 784 0.853 - - - - 0.853 - - - - -
48. PAQR8 ENSGALG00000016675 85 0.853 - - - - 0.853 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
49. PCNP ENSGALG00000015330 15750 0.853 - - - - 0.853 - - - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
50. TMEM87A ENSGALG00000009018 8027 0.853 - - - - - - 0.853 - - - transmembrane protein 87A [Source:HGNC Symbol;Acc:HGNC:24522]
51. SCAF4 ENSGALG00000033965 2027 0.852 - - - - 0.852 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
52. GLRX5 ENSGALG00000011079 28943 0.851 - - - - - - 0.851 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
53. ASTE1 ENSGALG00000036171 155 0.85 - - - - 0.850 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
54. CECR1 336 0.85 - - - - 0.850 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
55. CMTM3 ENSGALG00000000424 393 0.849 - - - - 0.849 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
56. DCTD ENSGALG00000010674 8396 0.848 - - - - - - - 0.848 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
57. CLIC3 ENSGALG00000038789 233 0.847 - - - - 0.847 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
58. TPGS2 ENSGALG00000026547 1967 0.846 - - - - 0.846 - - - - - tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
59. FAM171B ENSGALG00000002646 837 0.846 - - - - 0.846 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
60. AASDHPPT ENSGALG00000027981 1017 0.846 - - - - 0.846 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
61. IPO9 ENSGALG00000000397 9263 0.845 - - - - - - 0.845 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
62. PPTC7 ENSGALG00000004550 154 0.844 - - - - 0.844 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
63. HSDL2 ENSGALG00000015663 8966 0.844 - - - - - - 0.844 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
64. ATAD2 ENSGALG00000034348 4440 0.844 - - - - - - 0.844 - - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
65. CEP44 ENSGALG00000020201 1060 0.843 - - - - 0.843 - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
66. KDM5B ENSGALG00000038948 50645 0.843 - - - - - - 0.843 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
67. CNN2 ENSGALG00000027777 512 0.843 - - - - 0.843 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
68. CANT1 ENSGALG00000011822 2218 0.842 - - - - 0.842 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
69. LBR 6686 0.842 - - - - - - - 0.842 - - lamin B receptor, transcript variant X4
70. METRN ENSGALG00000035634 1871 0.842 - - - - 0.842 - - - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
71. CCDC88A ENSGALG00000043587 2208 0.842 - - - - 0.842 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
72. GGA.10540 GGA.10540 3324 0.842 - - - - 0.842 - - - - -
73. SRSF4 1200 0.841 - - - - 0.841 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
74. KCNC4 ENSGALG00000000400 129 0.84 - - - - 0.840 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
75. KIFC3 ENSGALG00000043034 802 0.84 - - - - 0.840 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
76. GSPT1 15580 0.838 - - - - - - 0.838 - - - G1 to S phase transition 1, transcript variant X1
77. MED18 ENSGALG00000028149 2684 0.838 - - - - 0.838 - - - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
78. LRRC6 ENSGALG00000042548 227 0.838 - - - - 0.838 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
79. CHCHD1 ENSGALG00000028809 9955 0.837 - - - - - - 0.837 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
80. NAT9 ENSGALG00000007723 2098 0.837 - - - - 0.837 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
81. CASP3 ENSGALG00000010638 11572 0.836 - - - - - - 0.836 - - - caspase 3 [Source:NCBI gene;Acc:395476]
82. MOCS3 ENSGALG00000007986 308 0.835 - - - - 0.835 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
83. TMEM115 ENSGALG00000026965 13050 0.835 - - - - - - 0.835 - - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
84. MED7 ENSGALG00000003870 4244 0.834 - - - - 0.834 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
85. BBX ENSGALG00000015353 1281 0.834 - - - - 0.834 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
86. ENSGALG00000022967 ENSGALG00000022967 240 0.833 - - - - 0.833 - - - - -
87. EXOSC9 ENSGALG00000011884 3403 0.83 - - - - - - - 0.830 - - exosome component 9 [Source:NCBI gene;Acc:619530]
88. TEF ENSGALG00000011958 375 0.83 - - - - 0.830 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
89. DNAJC17 ENSGALG00000036432 2828 0.83 - - - - 0.830 - - - - - DnaJ heat shock protein family (Hsp40) member C17 [Source:NCBI gene;Acc:770519]
90. PRPF6 ENSGALG00000006001 8572 0.829 - - - - - - 0.829 - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
91. FANCL ENSGALG00000030022 7423 0.828 - - - - - - - 0.828 - - FA complementation group L [Source:NCBI gene;Acc:421202]
92. B3GAT2 ENSGALG00000031590 615 0.828 - - - - 0.828 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
93. RAE1 ENSGALG00000007653 8930 0.828 - - - - - - 0.828 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
94. CAPN5 ENSGALG00000040478 2414 0.828 - - - - 0.828 - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
95. OAT ENSGALG00000031158 10249 0.827 - - - - - - 0.827 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
96. PNRC2 ENSGALG00000004122 19228 0.827 - - - - - - 0.827 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
97. TAC1 ENSGALG00000009737 2211 0.826 - - - - 0.826 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
98. PHF14 ENSGALG00000038041 13687 0.826 - - - - - - - 0.826 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
99. KDELR2 ENSGALG00000040793 29669 0.825 - - - - - - 0.825 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
100. SSU72 ENSGALG00000001489 7589 0.825 - - - - - - 0.825 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]

There are 548 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA