Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCARNA8

Gene Name Gene ID Reads Annotation
SCARNA8 ENSG00000251733 52 small Cajal body-specific RNA 8 [Source:HGNC Symbol;Acc:HGNC:32564]



Genes with expression patterns similar to SCARNA8

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCARNA8 ENSG00000251733 52 2 1.000 1.000 small Cajal body-specific RNA 8 [Source:HGNC Symbol;Acc:HGNC:32564]
2. DEFA6 ENSG00000164822, ENSG00000285136 9 0.982 - 0.982 defensin alpha 6 [Source:HGNC Symbol;Acc:HGNC:2765]
3. L3MBTL4 ENSG00000154655 22 0.979 - 0.979 L3MBTL4, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:26677]
4. ANXA9 ENSG00000143412 31 0.975 - 0.975 annexin A9 [Source:HGNC Symbol;Acc:HGNC:547]
5. SDR9C7 ENSG00000170426 14 0.975 - 0.975 short chain dehydrogenase/reductase family 9C member 7 [Source:HGNC Symbol;Acc:HGNC:29958]
6. WARS2-IT1 ENSG00000224238 16 0.972 - 0.972 WARS2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41393]
7. HR ENSG00000168453 12 0.971 - 0.971 HR, lysine demethylase and nuclear receptor corepressor [Source:HGNC Symbol;Acc:HGNC:5172]
8. LOC101927668 13 0.97 - 0.970 uncharacterized LOC101927668
9. NGF ENSG00000134259 49 0.968 - 0.968 nerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]
10. MAGIX ENSG00000269313 23 0.967 - 0.967 MAGI family member, X-linked [Source:HGNC Symbol;Acc:HGNC:30006]
11. POU6F2 ENSG00000106536 18 0.955 - 0.955 POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21694]
12. LOC101928002 15 0.949 - 0.949 uncharacterized LOC101928002
13. HBB ENSG00000244734 67 0.948 - 0.948 hemoglobin subunit beta [Source:HGNC Symbol;Acc:HGNC:4827]
14. SCARNA11 ENSG00000251898 18 0.945 - 0.945 small Cajal body-specific RNA 11 [Source:HGNC Symbol;Acc:HGNC:32568]
15. ZNF141 ENSG00000131127 19 0.943 - 0.943 zinc finger protein 141 [Source:HGNC Symbol;Acc:HGNC:12926]
16. RAG1 ENSG00000166349 33 0.935 - 0.935 recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]
17. B3GALT4 ENSG00000206285, ENSG00000226936, ENSG00000235155, ENSG00000235863, ENSG00000236802 27 0.933 - 0.933 beta-1,3-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:919]
18. LOC101927196 5 0.923 0.923 - uncharacterized LOC101927196, transcript variant 4
19. NLRP9 ENSG00000185792 17 0.923 0.923 - NLR family pyrin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:22941]
20. CD55 ENSG00000196352 465 0.918 - 0.918 CD55 molecule (Cromer blood group) [Source:HGNC Symbol;Acc:HGNC:2665]
21. DNAH5 ENSG00000039139 39 0.918 - 0.918 dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
22. LOC101928100 181 0.916 - 0.916 uncharacterized LOC101928100
23. FUZ ENSG00000010361 30 0.908 - 0.908 fuzzy planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:26219]
24. XRRA1 ENSG00000166435 135 0.908 - 0.908 X-ray radiation resistance associated 1 [Source:HGNC Symbol;Acc:HGNC:18868]
25. CFAP46 ENSG00000171811 26 0.908 - 0.908 cilia and flagella associated protein 46 [Source:HGNC Symbol;Acc:HGNC:25247]
26. ENPP6 ENSG00000164303 28 0.907 - 0.907 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
27. LINC00276 ENSG00000230448 31 0.904 - 0.904 long intergenic non-protein coding RNA 276 [Source:HGNC Symbol;Acc:HGNC:38663]
28. SLX4IP ENSG00000149346 124 0.894 - 0.894 SLX4 interacting protein [Source:HGNC Symbol;Acc:HGNC:16225]
29. CSNK2A2 ENSG00000070770 251 0.893 - 0.893 casein kinase 2 alpha 2 [Source:HGNC Symbol;Acc:HGNC:2459]
30. NPFFR2 ENSG00000056291 43 0.885 - 0.885 neuropeptide FF receptor 2 [Source:HGNC Symbol;Acc:HGNC:4525]
31. ARPP21 ENSG00000172995 67 0.883 - 0.883 cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
32. ZNF165 ENSG00000197279 322 0.883 - 0.883 zinc finger protein 165 [Source:HGNC Symbol;Acc:HGNC:12953]
33. FOXD4 ENSG00000170122 60 0.879 - 0.879 forkhead box D4 [Source:HGNC Symbol;Acc:HGNC:3805]
34. OR4F13P ENSG00000214344 26 0.879 - 0.879 olfactory receptor family 4 subfamily F member 13 pseudogene [Source:HGNC Symbol;Acc:HGNC:15076]
35. SCARNA18 ENSG00000238835 56 0.877 - 0.877 small Cajal body-specific RNA 18 [Source:HGNC Symbol;Acc:HGNC:32559]
36. SLC5A7 ENSG00000115665 184 0.871 - 0.871 solute carrier family 5 member 7 [Source:HGNC Symbol;Acc:HGNC:14025]
37. LOC149684 55 0.87 - 0.870 uncharacterized LOC149684
38. PRKG2 ENSG00000138669 84 0.87 - 0.870 protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
39. CARD6 ENSG00000132357 27 0.868 - 0.868 caspase recruitment domain family member 6 [Source:HGNC Symbol;Acc:HGNC:16394]
40. ZNF536 ENSG00000198597 124 0.865 - 0.865 zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]
41. DRAXIN ENSG00000162490 121 0.857 - 0.857 dorsal inhibitory axon guidance protein [Source:HGNC Symbol;Acc:HGNC:25054]
42. SNAP25-AS1 ENSG00000227906 28 0.854 - 0.854 SNAP25 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44312]
43. LOC102724623 53 0.853 - 0.853 uncharacterized LOC102724623
44. SECTM1 ENSG00000141574 32 0.853 - 0.853 secreted and transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:10707]
45. FAM63A 254 0.849 - 0.849 family with sequence similarity 63 member A, transcript variant X14
46. SH2B2 ENSG00000160999 74 0.848 - 0.848 SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
47. DPEP3 ENSG00000141096 28 0.839 - 0.839 dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]
48. PSAPL1 ENSG00000178597 9 0.837 0.837 - prosaposin like 1 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:33131]
49. EHD4-AS1 ENSG00000259883 3 0.837 0.837 - EHD4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51418]
50. IL10RB-AS1 4 0.837 0.837 - IL10RB antisense RNA 1 (head to head)
51. WBP11P1 ENSG00000260389 15 0.837 0.837 - WW domain binding protein 11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26250]
52. CYP2A6 ENSG00000255974 13 0.837 0.837 - cytochrome P450 family 2 subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:2610]
53. SNX15 ENSG00000110025 5 0.837 0.837 - sorting nexin 15 [Source:HGNC Symbol;Acc:HGNC:14978]
54. HAMP ENSG00000105697 9 0.837 0.837 - hepcidin antimicrobial peptide [Source:HGNC Symbol;Acc:HGNC:15598]
55. FAM71A ENSG00000162771 3 0.837 0.837 - family with sequence similarity 71 member A [Source:HGNC Symbol;Acc:HGNC:26541]
56. SLC2A2 ENSG00000163581 35 0.837 0.837 - solute carrier family 2 member 2 [Source:HGNC Symbol;Acc:HGNC:11006]
57. THRSP ENSG00000151365 13 0.837 0.837 - thyroid hormone responsive [Source:HGNC Symbol;Acc:HGNC:11800]
58. SLC9C2 ENSG00000162753 4 0.837 0.837 - solute carrier family 9 member C2 (putative) [Source:HGNC Symbol;Acc:HGNC:28664]
59. PLCZ1 ENSG00000139151 3 0.837 0.837 - phospholipase C zeta 1 [Source:HGNC Symbol;Acc:HGNC:19218]
60. NUDT3 ENSG00000272325 3 0.837 0.837 - nudix hydrolase 3 [Source:HGNC Symbol;Acc:HGNC:8050]
61. LOC101929162 4 0.837 0.837 - uncharacterized LOC101929162
62. CD8B ENSG00000172116 34 0.835 - 0.835 CD8b molecule [Source:HGNC Symbol;Acc:HGNC:1707]
63. TPTE2P5 ENSG00000168852 53 0.833 - 0.833 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42356]
64. NECAB1 ENSG00000123119 291 0.833 - 0.833 N-terminal EF-hand calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20983]
65. LRCH4 ENSG00000077454 269 0.831 - 0.831 leucine rich repeats and calponin homology domain containing 4 [Source:HGNC Symbol;Acc:HGNC:6691]
66. P2RY12 ENSG00000169313 32 0.831 - 0.831 purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
67. VPS9D1 ENSG00000075399 267 0.829 - 0.829 VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
68. ADPRHL1 ENSG00000153531 170 0.82 - 0.820 ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
69. CELF5 ENSG00000161082 441 0.82 - 0.820 CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
70. CLEC3A ENSG00000166509 86 0.819 - 0.819 C-type lectin domain family 3 member A [Source:HGNC Symbol;Acc:HGNC:2052]
71. DOK7 ENSG00000175920 54 0.819 - 0.819 docking protein 7 [Source:HGNC Symbol;Acc:HGNC:26594]
72. ABCA3 ENSG00000167972 111 0.813 - 0.813 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
73. RASGRP4 ENSG00000171777 11 0.812 0.812 - RAS guanyl releasing protein 4 [Source:HGNC Symbol;Acc:HGNC:18958]
74. ATP13A4 ENSG00000127249 15 0.809 0.809 - ATPase 13A4 [Source:HGNC Symbol;Acc:HGNC:25422]
75. LINC01301 ENSG00000251396 57 0.805 - 0.805 long intergenic non-protein coding RNA 1301 [Source:HGNC Symbol;Acc:HGNC:50464]
76. PIK3R6 ENSG00000276231 99 0.799 - 0.799 phosphoinositide-3-kinase regulatory subunit 6 [Source:HGNC Symbol;Acc:HGNC:27101]
77. LINC00889 135 0.797 - 0.797 long intergenic non-protein coding RNA 889
78. NCMAP ENSG00000184454 90 0.796 - 0.796 non-compact myelin associated protein [Source:HGNC Symbol;Acc:HGNC:29332]
79. ZNF204P ENSG00000204789 309 0.796 - 0.796 zinc finger protein 204, pseudogene [Source:HGNC Symbol;Acc:HGNC:12995]
80. NPPA ENSG00000175206 27 0.795 - 0.795 natriuretic peptide A [Source:HGNC Symbol;Acc:HGNC:7939]
81. ACKR4 ENSG00000129048 11 0.793 0.793 - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
82. CCKBR ENSG00000110148 45 0.789 0.789 - cholecystokinin B receptor [Source:HGNC Symbol;Acc:HGNC:1571]
83. CTXN3 ENSG00000205279 84 0.786 - 0.786 cortexin 3 [Source:HGNC Symbol;Acc:HGNC:31110]
84. TMPRSS5 ENSG00000166682 65 0.777 - 0.777 transmembrane serine protease 5 [Source:HGNC Symbol;Acc:HGNC:14908]
85. PKHD1L1 ENSG00000205038 26 0.777 0.777 - PKHD1 like 1 [Source:HGNC Symbol;Acc:HGNC:20313]
86. EPHA1-AS1 ENSG00000229153, ENSG00000285468 118 0.776 - 0.776 EPHA1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27799]
87. ARMC2 ENSG00000118690 78 0.774 - 0.774 armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
88. HGC6.3 ENSG00000235994 15 0.773 0.773 - uncharacterized LOC100128124 [Source:NCBI gene;Acc:100128124]
89. LOC101928402 51 0.764 - 0.764 uncharacterized LOC101928402
90. SPINK5 ENSG00000133710 24 0.764 0.764 - serine peptidase inhibitor, Kazal type 5 [Source:HGNC Symbol;Acc:HGNC:15464]
91. LHX9 ENSG00000143355 13 0.759 0.759 - LIM homeobox 9 [Source:HGNC Symbol;Acc:HGNC:14222]
92. ZNF540 ENSG00000171817 349 0.757 - 0.757 zinc finger protein 540 [Source:HGNC Symbol;Acc:HGNC:25331]
93. LOC644554 4 0.753 0.753 - uncharacterized LOC644554
94. SLC43A1 ENSG00000149150 78 0.752 - 0.752 solute carrier family 43 member 1 [Source:HGNC Symbol;Acc:HGNC:9225]
95. AQP4 ENSG00000171885 28 0.75 0.750 - aquaporin 4 [Source:HGNC Symbol;Acc:HGNC:637]
96. BANK1 ENSG00000153064 67 0.749 - 0.749 B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
97. AARSD1 ENSG00000266967 6 0.744 0.744 - alanyl-tRNA synthetase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28417]
98. PSMB7 ENSG00000136930 925 0.738 - 0.738 proteasome subunit beta 7 [Source:HGNC Symbol;Acc:HGNC:9544]
99. ZNF660 ENSG00000144792, ENSG00000280661 174 0.737 - 0.737 zinc finger protein 660 [Source:HGNC Symbol;Acc:HGNC:26720]
100. CEP44 ENSG00000164118 969 0.736 - 0.736 centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA