Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARNA18

Gene Name Gene ID Reads Annotation
SCARNA18 ENSG00000238835 56 small Cajal body-specific RNA 18 [Source:HGNC Symbol;Acc:HGNC:32559]



Genes with expression patterns similar to SCARNA18

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCARNA18 ENSG00000238835 56 2 1.000 1.000 small Cajal body-specific RNA 18 [Source:HGNC Symbol;Acc:HGNC:32559]
2. DEFA6 ENSG00000164822, ENSG00000285136 9 0.888 - 0.888 defensin alpha 6 [Source:HGNC Symbol;Acc:HGNC:2765]
3. SDR9C7 ENSG00000170426 14 0.881 - 0.881 short chain dehydrogenase/reductase family 9C member 7 [Source:HGNC Symbol;Acc:HGNC:29958]
4. HR ENSG00000168453 12 0.881 - 0.881 HR, lysine demethylase and nuclear receptor corepressor [Source:HGNC Symbol;Acc:HGNC:5172]
5. ANXA9 ENSG00000143412 31 0.881 - 0.881 annexin A9 [Source:HGNC Symbol;Acc:HGNC:547]
6. WARS2-IT1 ENSG00000224238 16 0.877 - 0.877 WARS2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41393]
7. SCARNA11 ENSG00000251898 18 0.877 - 0.877 small Cajal body-specific RNA 11 [Source:HGNC Symbol;Acc:HGNC:32568]
8. SCARNA8 ENSG00000251733 52 0.877 - 0.877 small Cajal body-specific RNA 8 [Source:HGNC Symbol;Acc:HGNC:32564]
9. LOC101927668 13 0.875 - 0.875 uncharacterized LOC101927668
10. NGF ENSG00000134259 49 0.873 - 0.873 nerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]
11. MAGIX ENSG00000269313 23 0.873 - 0.873 MAGI family member, X-linked [Source:HGNC Symbol;Acc:HGNC:30006]
12. L3MBTL4 ENSG00000154655 22 0.87 - 0.870 L3MBTL4, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:26677]
13. POU6F2 ENSG00000106536 18 0.859 - 0.859 POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21694]
14. LOC101928002 15 0.859 - 0.859 uncharacterized LOC101928002
15. RAG1 ENSG00000166349 33 0.855 - 0.855 recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]
16. HBB ENSG00000244734 67 0.853 - 0.853 hemoglobin subunit beta [Source:HGNC Symbol;Acc:HGNC:4827]
17. B3GALT4 ENSG00000206285, ENSG00000226936, ENSG00000235155, ENSG00000235863, ENSG00000236802 27 0.845 - 0.845 beta-1,3-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:919]
18. ZNF141 ENSG00000131127 19 0.842 - 0.842 zinc finger protein 141 [Source:HGNC Symbol;Acc:HGNC:12926]
19. SLX4IP ENSG00000149346 124 0.823 - 0.823 SLX4 interacting protein [Source:HGNC Symbol;Acc:HGNC:16225]
20. XRRA1 ENSG00000166435 135 0.82 - 0.820 X-ray radiation resistance associated 1 [Source:HGNC Symbol;Acc:HGNC:18868]
21. LINC00276 ENSG00000230448 31 0.818 - 0.818 long intergenic non-protein coding RNA 276 [Source:HGNC Symbol;Acc:HGNC:38663]
22. CD55 ENSG00000196352 465 0.817 - 0.817 CD55 molecule (Cromer blood group) [Source:HGNC Symbol;Acc:HGNC:2665]
23. CFAP46 ENSG00000171811 26 0.815 - 0.815 cilia and flagella associated protein 46 [Source:HGNC Symbol;Acc:HGNC:25247]
24. PRKG2 ENSG00000138669 84 0.813 - 0.813 protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
25. ENPP6 ENSG00000164303 28 0.813 - 0.813 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
26. LOC101928100 181 0.81 - 0.810 uncharacterized LOC101928100
27. DNAH5 ENSG00000039139 39 0.808 - 0.808 dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
28. FUZ ENSG00000010361 30 0.806 - 0.806 fuzzy planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:26219]
29. HIST1H2AG ENSG00000196787 74 0.8 0.800 - histone cluster 1 H2A family member g [Source:HGNC Symbol;Acc:HGNC:4737]
30. NPFFR2 ENSG00000056291 43 0.793 - 0.793 neuropeptide FF receptor 2 [Source:HGNC Symbol;Acc:HGNC:4525]
31. SLC5A7 ENSG00000115665 184 0.792 - 0.792 solute carrier family 5 member 7 [Source:HGNC Symbol;Acc:HGNC:14025]
32. ARPP21 ENSG00000172995 67 0.791 - 0.791 cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
33. OR4F13P ENSG00000214344 26 0.79 - 0.790 olfactory receptor family 4 subfamily F member 13 pseudogene [Source:HGNC Symbol;Acc:HGNC:15076]
34. LOC102724623 53 0.784 - 0.784 uncharacterized LOC102724623
35. LOC149684 55 0.784 - 0.784 uncharacterized LOC149684
36. FOXD4 ENSG00000170122 60 0.782 - 0.782 forkhead box D4 [Source:HGNC Symbol;Acc:HGNC:3805]
37. ZNF165 ENSG00000197279 322 0.779 - 0.779 zinc finger protein 165 [Source:HGNC Symbol;Acc:HGNC:12953]
38. NCMAP ENSG00000184454 90 0.779 - 0.779 non-compact myelin associated protein [Source:HGNC Symbol;Acc:HGNC:29332]
39. CARD6 ENSG00000132357 27 0.778 - 0.778 caspase recruitment domain family member 6 [Source:HGNC Symbol;Acc:HGNC:16394]
40. CSNK2A2 ENSG00000070770 251 0.777 - 0.777 casein kinase 2 alpha 2 [Source:HGNC Symbol;Acc:HGNC:2459]
41. LRCH4 ENSG00000077454 269 0.775 - 0.775 leucine rich repeats and calponin homology domain containing 4 [Source:HGNC Symbol;Acc:HGNC:6691]
42. SH2B2 ENSG00000160999 74 0.769 - 0.769 SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
43. ARMC2 ENSG00000118690 78 0.765 - 0.765 armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
44. ZNF536 ENSG00000198597 124 0.764 - 0.764 zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]
45. SNAP25-AS1 ENSG00000227906 28 0.763 - 0.763 SNAP25 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44312]
46. PSMB7 ENSG00000136930 925 0.76 - 0.760 proteasome subunit beta 7 [Source:HGNC Symbol;Acc:HGNC:9544]
47. DRAXIN ENSG00000162490 121 0.76 - 0.760 dorsal inhibitory axon guidance protein [Source:HGNC Symbol;Acc:HGNC:25054]
48. SECTM1 ENSG00000141574 32 0.754 - 0.754 secreted and transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:10707]
49. HSF5 ENSG00000176160 17 0.754 0.754 - heat shock transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:26862]
50. FGF12 ENSG00000114279 392 0.75 - 0.750 fibroblast growth factor 12 [Source:HGNC Symbol;Acc:HGNC:3668]
51. NECAB1 ENSG00000123119 291 0.75 - 0.750 N-terminal EF-hand calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20983]
52. CD8B ENSG00000172116 34 0.749 - 0.749 CD8b molecule [Source:HGNC Symbol;Acc:HGNC:1707]
53. CELF5 ENSG00000161082 441 0.749 - 0.749 CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
54. DPEP3 ENSG00000141096 28 0.746 - 0.746 dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]
55. XAB2 ENSG00000076924 10 0.743 0.743 - XPA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14089]
56. CLEC3A ENSG00000166509 86 0.737 - 0.737 C-type lectin domain family 3 member A [Source:HGNC Symbol;Acc:HGNC:2052]
57. ADPRHL1 ENSG00000153531 170 0.736 - 0.736 ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
58. FAM63A 254 0.735 - 0.735 family with sequence similarity 63 member A, transcript variant X14
59. SCARNA9L 47 0.732 - 0.732 small Cajal body-specific RNA 9-like
60. TPTE2P5 ENSG00000168852 53 0.728 - 0.728 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42356]
61. NPPA ENSG00000175206 27 0.727 - 0.727 natriuretic peptide A [Source:HGNC Symbol;Acc:HGNC:7939]
62. P2RY12 ENSG00000169313 32 0.727 - 0.727 purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
63. LINC00889 135 0.725 - 0.725 long intergenic non-protein coding RNA 889
64. VPS9D1 ENSG00000075399 267 0.717 - 0.717 VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
65. DOK7 ENSG00000175920 54 0.717 - 0.717 docking protein 7 [Source:HGNC Symbol;Acc:HGNC:26594]
66. TTLL6 ENSG00000170703 59 0.715 - 0.715 tubulin tyrosine ligase like 6 [Source:HGNC Symbol;Acc:HGNC:26664]
67. CTXN3 ENSG00000205279 84 0.715 - 0.715 cortexin 3 [Source:HGNC Symbol;Acc:HGNC:31110]
68. ABCA3 ENSG00000167972 111 0.714 - 0.714 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
69. LINC01301 ENSG00000251396 57 0.713 - 0.713 long intergenic non-protein coding RNA 1301 [Source:HGNC Symbol;Acc:HGNC:50464]
70. ZNF204P ENSG00000204789 309 0.712 - 0.712 zinc finger protein 204, pseudogene [Source:HGNC Symbol;Acc:HGNC:12995]
71. PIK3R6 ENSG00000276231 99 0.711 - 0.711 phosphoinositide-3-kinase regulatory subunit 6 [Source:HGNC Symbol;Acc:HGNC:27101]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA