Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCARNA13

Gene Name Gene ID Reads Annotation
SCARNA13 SCARNA13 122










Genes with expression patterns similar to SCARNA13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SCARNA13 SCARNA13 122 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ANKRD13D ENSDARG00000098140 88 1.861 - - - - 0.861 1.000 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
3. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 1.803 - - - - - 0.940 0.863 - - ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
4. efcab2 ENSDARG00000074323 88 1.792 - - - - - 1.000 0.792 - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
5. mfsd2b ENSDARG00000030263 12 1.788 0.788 - - - - 1.000 - - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
6. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1.744 - 0.804 - - - 0.940 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
7. epha6 ENSDARG00000022971 52 1.732 - 0.867 - - - - 0.865 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
8. wdr65 wdr65 251 1.711 - - - - - 0.771 0.940 - -
9. cacnb2a ENSDARG00000099045 374 1.708 - - - - 0.845 - 0.863 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
10. si:dkey-182g1.5 si:dkey-182g1.5 22 1.704 - - - - - 0.940 0.764 - -
11. mb21d2b mb21d2b 84 1.697 - - - - - 0.834 0.863 - -
12. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.693 0.880 - - - - - 0.813 - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
13. GBE1 GBE1 12 1.689 0.823 0.866 - - - - - - -
14. grifin ENSDARG00000033382 141 1.688 0.823 - - - - - 0.865 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
15. CR812472.2 ENSDARG00000097380 62 1.684 - 0.818 - - - - 0.866 - -
16. crispld1a ENSDARG00000077275 7 1.679 0.739 - - - - - 0.940 - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
17. bmp8a ENSDARG00000035677 40 1.669 - 0.823 - - - - 0.846 - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
18. LRP3 ENSDARG00000008485 1401 1.649 - - - - 0.709 0.940 - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
19. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.642 0.750 - - - - - 0.892 - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
20. grhpra ENSDARG00000068264 49 1.642 0.750 - - - - - 0.892 - - glyoxylate reductase/hydroxypyruvate reductase a [Source:ZFIN;Acc:ZDB-GENE-040724-230]
21. wt1a ENSDARG00000031420 166 1.641 - 0.913 - - - - 0.728 - - wilms tumor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-558]
22. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1.637 - 0.866 - - - 0.771 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
23. si:ch211-9d9.1 ENSDARG00000099839 75 1.637 0.861 0.776 - - - - - - - si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
24. si:ch211-202m22.1 ENSDARG00000094491 24 1.636 - - - - - 0.771 0.865 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
25. CABZ01112732.1 ENSDARG00000068453 4 1.636 - - - - - 0.771 0.865 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
26. NUGGC NUGGC 9 1.636 - - - - - 0.771 0.865 - -
27. rx3 ENSDARG00000052893 43 1.636 - - - - - 0.771 0.865 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
28. rnaset2l ENSDARG00000058413 17 1.634 - - - - - 0.771 0.863 - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
29. CU694319.1 CU694319.1 72 1.633 - - - - - 0.737 0.896 - -
30. mdm1 ENSDARG00000045675 64 1.624 - - - - 0.853 0.771 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
31. RPS6KL1 ENSDARG00000079024 22 1.61 0.792 0.818 - - - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
32. serpine3 ENSDARG00000057108 49 1.607 - - - - 0.836 0.771 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
33. wdr27_1 ENSDARG00000053386 1 1.604 0.739 - - - - - 0.865 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
34. CABZ01085626.1 ENSDARG00000117294 8 1.604 0.739 - - - - - 0.865 - -
35. dnah7 ENSDARG00000060165 21 1.604 0.739 - - - - - 0.865 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
36. nfixb ENSDARG00000061836 7 1.604 0.739 - - - - - 0.865 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
37. CU694372.1 ENSDARG00000097988 105 1.603 - - - - 0.832 0.771 - - -
38. EMB ENSDARG00000059485 35 1.602 0.739 - - - - - 0.863 - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
39. BX548000.1 ENSDARG00000099044 45 1.596 - - - - 0.825 0.771 - - -
40. c1qtnf5 ENSDARG00000056134 729 1.593 - 0.728 - - - - 0.865 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
41. FJX1 ENSDARG00000035873 22 1.592 0.739 0.853 - - - - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
42. tnk2a ENSDARG00000090646 133 1.582 - 0.804 - - - - 0.778 - - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
43. kcnj8 ENSDARG00000045589 92 1.579 - 0.789 - - - - 0.790 - - potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]
44. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.579 - - - - 0.808 0.771 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
45. cpa2 ENSDARG00000010146 28 1.579 0.739 0.840 - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
46. si:ch211-134c9.2 ENSDARG00000095593 86 1.577 - 0.804 - - - - 0.773 - - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
47. nrxn3a ENSDARG00000043746 54 1.568 0.750 0.818 - - - - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
48. C14orf80 C14orf80 20 1.558 - - - - - 0.771 0.787 - -
49. si:dkey-24i24.3 ENSDARG00000088452 27 1.557 0.739 0.818 - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
50. KHNYN ENSDARG00000092488 10 1.557 0.739 0.818 - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
51. ARHGAP6 33 1.557 0.739 0.818 - - - - - - - Rho GTPase activating protein 6
52. si:ch211-219a4.3 ENSDARG00000040445 120 1.545 - 0.764 - - 0.781 - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
53. CABZ01069081.1 CABZ01069081.1 16 1.542 - - - - - 0.771 0.771 - -
54. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.541 - - - - - 0.835 0.706 - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
55. ECT2L 39 1.537 0.739 - - - - - 0.798 - - epithelial cell transforming 2 like, transcript variant X4
56. PHYHIP ENSDARG00000116497 456 1.533 - 0.753 - - 0.780 - - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
57. aptx ENSDARG00000027143 87 1.53 - - - - - 0.771 0.759 - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
58. LRIF1_1 LRIF1_1 228 1.529 0.707 - - - - 0.822 - - -
59. brd2b ENSDARG00000046087 73 1.527 - 0.733 - - - 0.794 - - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
60. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.526 0.739 - - - - - 0.787 - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
61. TTF1_3 TTF1_3 215 1.526 0.739 - - - - - 0.787 - -
62. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.521 0.750 - - - - 0.771 - - -
63. BX640518.1 BX640518.1 24 1.521 0.750 - - - - 0.771 - - -
64. grpr ENSDARG00000056620 66 1.51 0.739 - - - - 0.771 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
65. hs6st3b ENSDARG00000069500 5 1.51 0.739 - - - - 0.771 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
66. dre-mir-429b ENSDARG00000082968 212 1.496 0.739 - - - 0.757 - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
67. CAMKK2 CAMKK2 184 1.493 0.722 0.771 - - - - - - -
68. nbn ENSDARG00000040303 43 1.486 0.715 - - - - 0.771 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
69. GPR64 GPR64 58 1.484 0.739 - - - - - 0.745 - -
70. gba2 ENSDARG00000061472 171 1.471 - 0.770 - - 0.701 - - - - glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
71. si:ch211-239f4.4 si:ch211-239f4.4 12 1.46 0.739 - - - - - 0.721 - -
72. GRIK3 ENSDARG00000077715 178 1.451 0.739 - - - - 0.712 - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
73. BX530409.1 BX530409.1 65 1.45 0.739 - - - - 0.711 - - -
74. FAM149B1 ENSDARG00000061215 273 1.446 - - - - 0.701 - 0.745 - - family with sequence similarity 149, member B1 [Source:ZFIN;Acc:ZDB-GENE-070112-2102]
75. zbtb12.2 ENSDARG00000070658 55 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
76. HIST1H4H HIST1H4H 26 1 - - - - - 1.000 - - -
77. si:dkey-103d23.5 26 1 - - - - - 1.000 - - - si:dkey-103d23.5
78. brinp3b ENSDARG00000075352 14 1 - - - - - 1.000 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
79. grm2a ENSDARG00000004150 64 1 - - - - - 1.000 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
80. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - - - - 1.000 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
81. si:dkey-16p19.3 si:dkey-16p19.3 119 1 - - - - - 1.000 - - -
82. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
83. znf142 ENSDARG00000061373 47 0.982 - - - - - 0.982 - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
84. si:dkey-1d7.3 ENSDARG00000075837 18 0.982 - - - - - 0.982 - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
85. sstr1a ENSDARG00000104922 22 0.982 - - - - - 0.982 - - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
86. DHX32 DHX32 181 0.982 - - - - - 0.982 - - -
87. kcnj1b ENSDARG00000002666 87 0.972 - - - - - 0.972 - - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
88. gpr22 gpr22 115 0.971 - - - - - 0.971 - - -
89. ripk2 ENSDARG00000104290 71 0.958 - - - - - - 0.958 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
90. tac3a ENSDARG00000093089, ENSDARG00000110723 75 0.956 - - - - - 0.956 - - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
91. tbc1d31 ENSDARG00000074623 94 0.953 - - - - - 0.953 - - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
92. sptssb ENSDARG00000091658 42 0.949 0.949 - - - - - - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
93. si:dkey-104k17.1 si:dkey-104k17.1 13 0.94 - - - - - - 0.940 - -
94. cdadc1 ENSDARG00000036650 16 0.94 - - - - - 0.940 - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
95. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.94 - - - - - 0.940 - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
96. C6H21orf58 C6H21orf58 14 0.94 - - - - - - 0.940 - -
97. zgc:173713 17 0.94 - - - - - 0.940 - - - zgc:173713, transcript variant X2
98. bcan ENSDARG00000099412 18 0.94 - - - - - 0.940 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
99. C25H15orf27 C25H15orf27 69 0.94 - - - - - 0.940 - - -
100. ZNF337_21 ZNF337_21 53 0.94 - - - - - 0.940 - - -

There are 1458 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA