Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARNA11

Gene Name Gene ID Reads Annotation
SCARNA11 ENSG00000251898 18 small Cajal body-specific RNA 11 [Source:HGNC Symbol;Acc:HGNC:32568]



Genes with expression patterns similar to SCARNA11

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCARNA11 ENSG00000251898 18 2 1.000 1.000 small Cajal body-specific RNA 11 [Source:HGNC Symbol;Acc:HGNC:32568]
2. ZEB2-AS1 ENSG00000238057 18 0.972 0.972 - ZEB2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37149]
3. DEFA6 ENSG00000164822, ENSG00000285136 9 0.966 - 0.966 defensin alpha 6 [Source:HGNC Symbol;Acc:HGNC:2765]
4. PDX1 ENSG00000139515 590 0.963 0.963 - pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6107]
5. ADAM7 ENSG00000069206 3 0.963 0.963 - ADAM metallopeptidase domain 7 [Source:HGNC Symbol;Acc:HGNC:214]
6. STKLD1 ENSG00000198870, ENSG00000281245 5 0.963 0.963 - serine/threonine kinase like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28669]
7. C1orf87 ENSG00000162598 2 0.963 0.963 - chromosome 1 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:28547]
8. DBET ENSG00000281591 3 0.963 0.963 - D4Z4 binding element transcript [Source:HGNC Symbol;Acc:HGNC:43904]
9. LOC100128176 LOC100128176 2 0.963 0.963 -
10. PCDHAC1 ENSG00000248383 2 0.963 0.963 - protocadherin alpha subfamily C, 1 [Source:HGNC Symbol;Acc:HGNC:8676]
11. LINC01268 ENSG00000227502 3 0.963 0.963 - long intergenic non-protein coding RNA 1268 [Source:HGNC Symbol;Acc:HGNC:50323]
12. PLG ENSG00000122194 160 0.963 0.963 - plasminogen [Source:HGNC Symbol;Acc:HGNC:9071]
13. C7orf62 7 0.963 0.963 - chromosome 7 open reading frame 62, transcript variant X1
14. DNAJB8 ENSG00000179407 2 0.963 0.963 - DnaJ heat shock protein family (Hsp40) member B8 [Source:HGNC Symbol;Acc:HGNC:23699]
15. LOC101929084 2 0.963 0.963 - uncharacterized LOC101929084
16. ANKRD20A19P ENSG00000196593 2 0.963 0.963 - ankyrin repeat domain 20 family member A19, pseudogene [Source:HGNC Symbol;Acc:HGNC:42737]
17. LINC01127 ENSG00000281162 2 0.963 0.963 - long intergenic non-protein coding RNA 1127 [Source:HGNC Symbol;Acc:HGNC:49292]
18. FAM217A ENSG00000145975 2 0.963 0.963 - family with sequence similarity 217 member A [Source:HGNC Symbol;Acc:HGNC:21362]
19. LINC00581 ENSG00000280989 2 0.963 0.963 - long intergenic non-protein coding RNA 581 [Source:HGNC Symbol;Acc:HGNC:43840]
20. GTF2IP1 ENSG00000277053 3 0.963 0.963 - general transcription factor IIi pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4660]
21. LYPD2 ENSG00000197353 2 0.963 0.963 - LY6/PLAUR domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25215]
22. SPRED3 ENSG00000188766 5 0.963 0.963 - sprouty related EVH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31041]
23. PCED1B-AS1 ENSG00000247774 4 0.963 0.963 - PCED1B antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44166]
24. LOC101927356 3 0.963 0.963 - uncharacterized LOC101927356, transcript variant 2
25. TSPAN16 ENSG00000130167 2 0.963 0.963 - tetraspanin 16 [Source:HGNC Symbol;Acc:HGNC:30725]
26. PMS2P5 ENSG00000123965 4 0.963 0.963 - PMS1 homolog 2, mismatch repair system component pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:9130]
27. AVPR2 ENSG00000126895 2 0.963 0.963 - arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]
28. LOC100505658 6 0.963 0.963 - uncharacterized LOC100505658
29. SDR9C7 ENSG00000170426 14 0.961 - 0.961 short chain dehydrogenase/reductase family 9C member 7 [Source:HGNC Symbol;Acc:HGNC:29958]
30. ANXA9 ENSG00000143412 31 0.959 - 0.959 annexin A9 [Source:HGNC Symbol;Acc:HGNC:547]
31. WARS2-IT1 ENSG00000224238 16 0.957 - 0.957 WARS2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41393]
32. HR ENSG00000168453 12 0.955 - 0.955 HR, lysine demethylase and nuclear receptor corepressor [Source:HGNC Symbol;Acc:HGNC:5172]
33. LOC101927668 13 0.955 - 0.955 uncharacterized LOC101927668
34. MAGIX ENSG00000269313 23 0.952 - 0.952 MAGI family member, X-linked [Source:HGNC Symbol;Acc:HGNC:30006]
35. L3MBTL4 ENSG00000154655 22 0.95 - 0.950 L3MBTL4, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:26677]
36. SCARNA8 ENSG00000251733 52 0.945 - 0.945 small Cajal body-specific RNA 8 [Source:HGNC Symbol;Acc:HGNC:32564]
37. NGF ENSG00000134259 49 0.943 - 0.943 nerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]
38. POU6F2 ENSG00000106536 18 0.938 - 0.938 POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21694]
39. LOC101928002 15 0.935 - 0.935 uncharacterized LOC101928002
40. HBB ENSG00000244734 67 0.93 - 0.930 hemoglobin subunit beta [Source:HGNC Symbol;Acc:HGNC:4827]
41. ZNF141 ENSG00000131127 19 0.926 - 0.926 zinc finger protein 141 [Source:HGNC Symbol;Acc:HGNC:12926]
42. RAG1 ENSG00000166349 33 0.913 - 0.913 recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]
43. CD55 ENSG00000196352 465 0.912 - 0.912 CD55 molecule (Cromer blood group) [Source:HGNC Symbol;Acc:HGNC:2665]
44. FUZ ENSG00000010361 30 0.911 - 0.911 fuzzy planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:26219]
45. LOC101928100 181 0.905 - 0.905 uncharacterized LOC101928100
46. B3GALT4 ENSG00000206285, ENSG00000226936, ENSG00000235155, ENSG00000235863, ENSG00000236802 27 0.905 - 0.905 beta-1,3-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:919]
47. LINC00276 ENSG00000230448 31 0.897 - 0.897 long intergenic non-protein coding RNA 276 [Source:HGNC Symbol;Acc:HGNC:38663]
48. LOC149684 55 0.895 - 0.895 uncharacterized LOC149684
49. ENPP6 ENSG00000164303 28 0.895 - 0.895 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
50. CFAP46 ENSG00000171811 26 0.893 - 0.893 cilia and flagella associated protein 46 [Source:HGNC Symbol;Acc:HGNC:25247]
51. DNAH5 ENSG00000039139 39 0.891 - 0.891 dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
52. SH2B2 ENSG00000160999 74 0.883 - 0.883 SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
53. SLC5A7 ENSG00000115665 184 0.878 - 0.878 solute carrier family 5 member 7 [Source:HGNC Symbol;Acc:HGNC:14025]
54. SCARNA18 ENSG00000238835 56 0.877 - 0.877 small Cajal body-specific RNA 18 [Source:HGNC Symbol;Acc:HGNC:32559]
55. XRRA1 ENSG00000166435 135 0.875 - 0.875 X-ray radiation resistance associated 1 [Source:HGNC Symbol;Acc:HGNC:18868]
56. NPFFR2 ENSG00000056291 43 0.868 - 0.868 neuropeptide FF receptor 2 [Source:HGNC Symbol;Acc:HGNC:4525]
57. OR4F13P ENSG00000214344 26 0.867 - 0.867 olfactory receptor family 4 subfamily F member 13 pseudogene [Source:HGNC Symbol;Acc:HGNC:15076]
58. ARPP21 ENSG00000172995 67 0.866 - 0.866 cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
59. CSNK2A2 ENSG00000070770 251 0.865 - 0.865 casein kinase 2 alpha 2 [Source:HGNC Symbol;Acc:HGNC:2459]
60. PRKG2 ENSG00000138669 84 0.864 - 0.864 protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
61. SLX4IP ENSG00000149346 124 0.864 - 0.864 SLX4 interacting protein [Source:HGNC Symbol;Acc:HGNC:16225]
62. FOXD4 ENSG00000170122 60 0.863 - 0.863 forkhead box D4 [Source:HGNC Symbol;Acc:HGNC:3805]
63. LRCH4 ENSG00000077454 269 0.862 - 0.862 leucine rich repeats and calponin homology domain containing 4 [Source:HGNC Symbol;Acc:HGNC:6691]
64. CRYGN ENSG00000127377 24 0.859 0.859 - crystallin gamma N [Source:HGNC Symbol;Acc:HGNC:20458]
65. CARD6 ENSG00000132357 27 0.852 - 0.852 caspase recruitment domain family member 6 [Source:HGNC Symbol;Acc:HGNC:16394]
66. ZNF165 ENSG00000197279 322 0.851 - 0.851 zinc finger protein 165 [Source:HGNC Symbol;Acc:HGNC:12953]
67. SNAP25-AS1 ENSG00000227906 28 0.846 - 0.846 SNAP25 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44312]
68. SECTM1 ENSG00000141574 32 0.844 - 0.844 secreted and transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:10707]
69. ZNF536 ENSG00000198597 124 0.838 - 0.838 zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]
70. FAM63A 254 0.837 - 0.837 family with sequence similarity 63 member A, transcript variant X14
71. DRAXIN ENSG00000162490 121 0.834 - 0.834 dorsal inhibitory axon guidance protein [Source:HGNC Symbol;Acc:HGNC:25054]
72. ADPRHL1 ENSG00000153531 170 0.834 - 0.834 ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
73. UOX ENSG00000240520 6 0.832 0.832 - urate oxidase (pseudogene) [Source:HGNC Symbol;Acc:HGNC:12575]
74. P2RY12 ENSG00000169313 32 0.831 - 0.831 purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
75. DPEP3 ENSG00000141096 28 0.827 - 0.827 dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]
76. NPPA ENSG00000175206 27 0.826 - 0.826 natriuretic peptide A [Source:HGNC Symbol;Acc:HGNC:7939]
77. CLEC3A ENSG00000166509 86 0.825 - 0.825 C-type lectin domain family 3 member A [Source:HGNC Symbol;Acc:HGNC:2052]
78. CD8B ENSG00000172116 34 0.824 - 0.824 CD8b molecule [Source:HGNC Symbol;Acc:HGNC:1707]
79. SYNE1-AS1 ENSG00000234577 6 0.819 0.819 - SYNE1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40793]
80. SLC22A7 ENSG00000137204 6 0.819 0.819 - solute carrier family 22 member 7 [Source:HGNC Symbol;Acc:HGNC:10971]
81. LOC102724623 53 0.819 - 0.819 uncharacterized LOC102724623
82. HIST1H4A ENSG00000278637 16 0.819 0.819 - histone cluster 1 H4 family member a [Source:HGNC Symbol;Acc:HGNC:4781]
83. TPTE2P5 ENSG00000168852 53 0.816 - 0.816 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:42356]
84. DOK7 ENSG00000175920 54 0.806 - 0.806 docking protein 7 [Source:HGNC Symbol;Acc:HGNC:26594]
85. LOC613037 10 0.806 0.806 - nuclear pore complex interacting protein member, transcript variant X9
86. VPS9D1 ENSG00000075399 267 0.805 - 0.805 VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
87. CELF5 ENSG00000161082 441 0.804 - 0.804 CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
88. LINC00889 135 0.803 - 0.803 long intergenic non-protein coding RNA 889
89. NECAB1 ENSG00000123119 291 0.799 - 0.799 N-terminal EF-hand calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20983]
90. LINC01301 ENSG00000251396 57 0.798 - 0.798 long intergenic non-protein coding RNA 1301 [Source:HGNC Symbol;Acc:HGNC:50464]
91. CTXN3 ENSG00000205279 84 0.791 - 0.791 cortexin 3 [Source:HGNC Symbol;Acc:HGNC:31110]
92. ABCA3 ENSG00000167972 111 0.789 - 0.789 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
93. TMPRSS5 ENSG00000166682 65 0.787 - 0.787 transmembrane serine protease 5 [Source:HGNC Symbol;Acc:HGNC:14908]
94. NCMAP ENSG00000184454 90 0.786 - 0.786 non-compact myelin associated protein [Source:HGNC Symbol;Acc:HGNC:29332]
95. PIK3R6 ENSG00000276231 99 0.785 - 0.785 phosphoinositide-3-kinase regulatory subunit 6 [Source:HGNC Symbol;Acc:HGNC:27101]
96. LOC101928254 7 0.782 0.782 - uncharacterized LOC101928254, transcript variant 2
97. C15orf32 ENSG00000183643 8 0.782 0.782 - chromosome 15 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]
98. LINC00595 6 0.779 0.779 - long intergenic non-protein coding RNA 595
99. AMZ1 ENSG00000174945 4 0.779 0.779 - archaelysin family metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:22231]
100. BANK1 ENSG00000153064 67 0.772 - 0.772 B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]

There are 36 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA