Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARNA1

Gene Name Gene ID Reads Annotation
SCARNA1 ENSG00000252947 10 small Cajal body-specific RNA 1 [Source:HGNC Symbol;Acc:HGNC:32555]



Genes with expression patterns similar to SCARNA1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCARNA1 ENSG00000252947 10 2 1.000 1.000 small Cajal body-specific RNA 1 [Source:HGNC Symbol;Acc:HGNC:32555]
2. SLC2A9 ENSG00000109667 5 1 1.000 - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
3. LRRC63 ENSG00000173988 16 1 1.000 - leucine rich repeat containing 63 [Source:HGNC Symbol;Acc:HGNC:34296]
4. C2orf27A ENSG00000197927, ENSG00000274392 5 1 1.000 - chromosome 2 open reading frame 27A [Source:NCBI gene;Acc:29798]
5. LOC100129931 2 1 1.000 - uncharacterized LOC100129931
6. ZMYND15 ENSG00000141497 2 1 1.000 - zinc finger MYND-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20997]
7. ADTRP ENSG00000111863 3 1 1.000 - androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
8. RNASE10 ENSG00000182545 2 1 1.000 - ribonuclease A family member 10 (inactive) [Source:HGNC Symbol;Acc:HGNC:19275]
9. CMTM5 ENSG00000166091 15 1 1.000 - CKLF like MARVEL transmembrane domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19176]
10. SLC35G4 ENSG00000236396 2 1 1.000 - solute carrier family 35 member G4 [Source:HGNC Symbol;Acc:HGNC:31043]
11. LINC01529 ENSG00000225872 5 1 1.000 - long intergenic non-protein coding RNA 1529 [Source:HGNC Symbol;Acc:HGNC:51268]
12. MIR6074 ENSG00000276878 2 1 1.000 - microRNA 6074 [Source:HGNC Symbol;Acc:HGNC:50060]
13. EXOC3L4 ENSG00000205436 3 1 1.000 - exocyst complex component 3 like 4 [Source:HGNC Symbol;Acc:HGNC:20120]
14. ADCY8 ENSG00000155897 5 1 1.000 - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
15. GBP7 ENSG00000213512 7 1 1.000 - guanylate binding protein 7 [Source:HGNC Symbol;Acc:HGNC:29606]
16. CDKN2A ENSG00000147889 7 1 1.000 - cyclin dependent kinase inhibitor 2A [Source:HGNC Symbol;Acc:HGNC:1787]
17. LINC01512 2 1 1.000 - long intergenic non-protein coding RNA 1512
18. LINC00689 ENSG00000231419 3 1 1.000 - long intergenic non-protein coding RNA 689 [Source:HGNC Symbol;Acc:HGNC:27217]
19. CIB3 ENSG00000141977 6 1 1.000 - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
20. LOC100129175 2 1 1.000 - uncharacterized LOC100129175
21. AQP5 ENSG00000161798 4 1 1.000 - aquaporin 5 [Source:HGNC Symbol;Acc:HGNC:638]
22. FOXC2-AS1 ENSG00000260944 23 1 1.000 - FOXC2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50665]
23. LOC101928266 3 1 1.000 - uncharacterized LOC101928266
24. LINC00602 ENSG00000281832 4 1 1.000 - long intergenic non-protein coding RNA 602 [Source:HGNC Symbol;Acc:HGNC:43917]
25. HEATR4 ENSG00000187105 2 1 1.000 - HEAT repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:16761]
26. TRIML2 ENSG00000179046 5 1 1.000 - tripartite motif family like 2 [Source:HGNC Symbol;Acc:HGNC:26378]
27. CLEC10A ENSG00000132514 15 1 1.000 - C-type lectin domain containing 10A [Source:HGNC Symbol;Acc:HGNC:16916]
28. LOC101928449 2 1 1.000 - uncharacterized LOC101928449
29. SERPINB2 ENSG00000197632 15 0.946 0.946 - serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]
30. CD226 ENSG00000150637 8 0.934 0.934 - CD226 molecule [Source:HGNC Symbol;Acc:HGNC:16961]
31. CLK2P1 ENSG00000232553 8 0.929 0.929 - CDC like kinase 2, pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2070]
32. LOC101928514 20 0.911 0.911 - uncharacterized LOC101928514
33. LINC00996 ENSG00000242258 15 0.9 0.900 - long intergenic non-protein coding RNA 996 [Source:HGNC Symbol;Acc:HGNC:27800]
34. LONRF3 ENSG00000175556 19 0.897 0.897 - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
35. TPSAB1 ENSG00000172236 13 0.885 0.885 - tryptase alpha/beta 1 [Source:HGNC Symbol;Acc:HGNC:12019]
36. IL18 ENSG00000150782 10 0.881 0.881 - interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]
37. MSR1 ENSG00000038945 28 0.879 0.879 - macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:HGNC:7376]
38. GNLY ENSG00000115523 6 0.872 0.872 - granulysin [Source:HGNC Symbol;Acc:HGNC:4414]
39. LINC01082 ENSG00000269186 16 0.872 0.872 - long intergenic non-protein coding RNA 1082 [Source:HGNC Symbol;Acc:HGNC:49125]
40. CYP4B1 ENSG00000142973 4 0.859 0.859 - cytochrome P450 family 4 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2644]
41. SOWAHA ENSG00000198944 17 0.859 0.859 - sosondowah ankyrin repeat domain family member A [Source:HGNC Symbol;Acc:HGNC:27033]
42. NRADDP ENSG00000236409 9 0.859 0.859 - neurotrophin receptor associated death domain, pseudogene [Source:HGNC Symbol;Acc:HGNC:19337]
43. CD200R1 ENSG00000163606 38 0.857 0.857 - CD200 receptor 1 [Source:HGNC Symbol;Acc:HGNC:24235]
44. FAM83E ENSG00000105523 14 0.857 0.857 - family with sequence similarity 83 member E [Source:HGNC Symbol;Acc:HGNC:25972]
45. TRPM1 ENSG00000134160, ENSG00000274965 4 0.857 0.857 - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
46. STEAP4 ENSG00000127954 4 0.846 0.846 - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
47. SYCP3 ENSG00000139351 5 0.846 0.846 - synaptonemal complex protein 3 [Source:HGNC Symbol;Acc:HGNC:18130]
48. CD164L2 ENSG00000174950 3 0.846 0.846 - CD164 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:32043]
49. PIK3IP1-AS1 ENSG00000228839 6 0.846 0.846 - PIK3IP1 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:41072]
50. LOC101928837 22 0.844 0.844 - uncharacterized LOC101928837, transcript variant 2
51. TG ENSG00000042832 12 0.84 0.840 - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
52. TDRD5 ENSG00000162782 15 0.84 0.840 - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
53. CIRBP-AS1 ENSG00000267493 23 0.839 0.839 - CIRBP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28588]
54. CYP4A11 ENSG00000187048 22 0.829 0.829 - cytochrome P450 family 4 subfamily A member 11 [Source:HGNC Symbol;Acc:HGNC:2642]
55. CATIP ENSG00000158428 4 0.824 0.824 - ciliogenesis associated TTC17 interacting protein [Source:HGNC Symbol;Acc:HGNC:25062]
56. TREML4 ENSG00000188056 8 0.818 0.818 - triggering receptor expressed on myeloid cells like 4 [Source:HGNC Symbol;Acc:HGNC:30807]
57. RHCE ENSG00000188672 15 0.818 0.818 - Rh blood group CcEe antigens [Source:HGNC Symbol;Acc:HGNC:10008]
58. LINC01111 ENSG00000254300 10 0.811 0.811 - long intergenic non-protein coding RNA 1111 [Source:HGNC Symbol;Acc:HGNC:49237]
59. SLC6A19 ENSG00000174358 22 0.808 0.808 - solute carrier family 6 member 19 [Source:HGNC Symbol;Acc:HGNC:27960]
60. RP1L1 ENSG00000183638, ENSG00000285131 43 0.808 0.808 - RP1 like 1 [Source:NCBI gene;Acc:94137]
61. LOC101927120 15 0.807 0.807 - uncharacterized LOC101927120, transcript variant 2
62. TNFSF11 ENSG00000120659 10 0.807 0.807 - TNF superfamily member 11 [Source:HGNC Symbol;Acc:HGNC:11926]
63. GLUD2 ENSG00000182890 12 0.79 0.790 - glutamate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:4336]
64. SLC7A10 ENSG00000130876 6 0.788 0.788 - solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
65. CRSP8P ENSG00000248569 12 0.772 - 0.772 mediator complex subunit 27 pseudogene [Source:NCBI gene;Acc:441089]
66. COL6A6 ENSG00000206384 54 0.772 0.772 - collagen type VI alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:27023]
67. DCAF4L1 ENSG00000182308 7 0.768 0.768 - DDB1 and CUL4 associated factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:27723]
68. C5orf66-AS1 ENSG00000249082 5 0.763 0.763 - C5orf66 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49679]
69. LOC730668 5 0.76 0.760 - dynein heavy chain -like pseudogene
70. CLEC4C ENSG00000198178 7 0.76 - 0.760 C-type lectin domain family 4 member C [Source:HGNC Symbol;Acc:HGNC:13258]
71. ANKRD18DP ENSG00000226435, ENSG00000281617 14 0.758 0.758 - ankyrin repeat domain 18D, pseudogene [Source:HGNC Symbol;Acc:HGNC:28016]
72. RALY-AS1 ENSG00000285230 120 0.758 0.758 - RALY antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50743]
73. ACSM2B ENSG00000066813 13 0.755 0.755 - acyl-CoA synthetase medium chain family member 2B [Source:HGNC Symbol;Acc:HGNC:30931]
74. IL1RAPL1 ENSG00000169306 10 0.751 0.751 - interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]
75. LINC00485 ENSG00000258169 12 0.749 0.749 - long intergenic non-protein coding RNA 485 [Source:HGNC Symbol;Acc:HGNC:27476]
76. HOXB13 ENSG00000159184 4 0.745 0.745 - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
77. AADAC ENSG00000114771 16 0.742 0.742 - arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
78. LOC143666 128 0.741 0.741 - uncharacterized LOC143666
79. TAF1A-AS1 ENSG00000225265 32 0.74 0.740 - TAF1A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40573]
80. LINC01360 ENSG00000233973 10 0.731 0.731 - long intergenic non-protein coding RNA 1360 [Source:HGNC Symbol;Acc:HGNC:50593]
81. LOC101930010 11 0.728 0.728 - uncharacterized LOC101930010
82. ACE ENSG00000159640 28 0.727 0.727 - angiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]
83. DENND1C ENSG00000205744 71 0.726 - 0.726 DENN domain containing 1C [Source:HGNC Symbol;Acc:HGNC:26225]
84. LINC01091 ENSG00000249464 3 0.724 - 0.724 long intergenic non-protein coding RNA 1091 [Source:HGNC Symbol;Acc:HGNC:27721]
85. C15orf53 ENSG00000175779 3 0.724 - 0.724 chromosome 15 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:33796]
86. PP12613 ENSG00000226757 1 0.724 - 0.724 uncharacterized LOC100192379 [Source:NCBI gene;Acc:100192379]
87. SNORD116-2 ENSG00000207001 1 0.724 - 0.724 small nucleolar RNA, C/D box 116-2 [Source:HGNC Symbol;Acc:HGNC:33068]
88. ASMTL ENSG00000169093 1 0.724 - 0.724 acetylserotonin O-methyltransferase like [Source:HGNC Symbol;Acc:HGNC:751]
89. FAM166B ENSG00000215187 1 0.724 - 0.724 family with sequence similarity 166 member B [Source:HGNC Symbol;Acc:HGNC:34242]
90. UBE2Q2P2 ENSG00000259429, ENSG00000282084 1 0.724 - 0.724 ubiquitin conjugating enzyme E2 Q2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37440]
91. LCE1D ENSG00000172155 1 0.724 - 0.724 late cornified envelope 1D [Source:HGNC Symbol;Acc:HGNC:29465]
92. RDH5 ENSG00000135437 4 0.722 0.722 - retinol dehydrogenase 5 [Source:HGNC Symbol;Acc:HGNC:9940]
93. C6orf58 ENSG00000184530 6 0.721 - 0.721 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
94. SLC22A4 ENSG00000197208 36 0.72 0.720 - solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]
95. LOC440117 1 0.718 - 0.718 uncharacterized LOC440117
96. NEU3 ENSG00000162139 6 0.716 - 0.716 neuraminidase 3 [Source:HGNC Symbol;Acc:HGNC:7760]
97. OR5A1 ENSG00000172320 5 0.714 0.714 - olfactory receptor family 5 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:8319]
98. VRTN ENSG00000133980 5 0.708 0.708 - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
99. PCAT4 ENSG00000251321 2 0.706 - 0.706 prostate cancer associated transcript 4 [Source:HGNC Symbol;Acc:HGNC:24853]
100. LOC100507639 6 0.703 0.703 - uncharacterized LOC100507639
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA