Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARF2

Gene Name Gene ID Reads Annotation
SCARF2 ENSGALG00000034560 6945 scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]











Genes with expression patterns similar to SCARF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCARF2 ENSGALG00000034560 6945 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
2. COL9A2 ENSGALG00000027526 4685 1.521 - - - - - - 0.766 - 0.755 - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
3. TCF15 ENSGALG00000026276 3646 1.482 - - 0.758 - 0.724 - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
4. TMEM182 ENSGALG00000038936 274 0.812 - - 0.812 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
5. WDSUB1 ENSGALG00000012574 2038 0.81 - - - - - - - 0.810 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
6. ACBD7 ENSGALG00000019663 2328 0.789 - - 0.789 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
7. PPIE ENSGALG00000013383 3923 0.787 - - - - - - - 0.787 - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
8. TNNI1 ENSGALG00000000313 4069 0.787 - - 0.787 - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
9. C1QTNF3 ENSGALG00000027887 8646 0.782 - - 0.782 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
10. KLHDC3 ENSGALG00000008536 1961 0.77 - - - - - - 0.770 - - - kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]
11. NMI ENSGALG00000012480 2172 0.767 - - - - - - - 0.767 - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
12. GGMOXR1 GGMOXR1 6734 0.766 - - 0.766 - - - - - - -
13. SHH ENSGALG00000006379 1943 0.766 - - - - - - - - 0.766 - sonic hedgehog [Source:NCBI gene;Acc:395615]
14. MEOX2 ENSGALG00000010794 1556 0.757 - - 0.757 - - - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
15. CCDC82 925 0.757 - - - - - - - 0.757 - - coiled-coil domain containing 82, transcript variant X3
16. MYL3 ENSGALG00000005448 3379 0.757 - - 0.757 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
17. TNNT3 ENSGALG00000006572 1652 0.754 - - 0.754 - - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
18. VAT1 ENSGALG00000002818 10333 0.753 - - - - - - 0.753 - - - vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
19. MYL1 ENSGALG00000002907 1300 0.753 - - 0.753 - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
20. ACTC1 ENSGALG00000009844 20914 0.748 - - 0.748 - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
21. NGFR ENSGALG00000035950 13452 0.748 - - 0.748 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
22. ME1 ENSGALG00000015849 1169 0.746 - - - - - - - 0.746 - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
23. PPP2R2B ENSGALG00000007565 4883 0.742 - - - - - - 0.742 - - - protein phosphatase 2 regulatory subunit Bbeta [Source:HGNC Symbol;Acc:HGNC:9305]
24. TMEM47 ENSGALG00000027198 3619 0.742 - - 0.742 - - - - - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
25. SOX9 ENSGALG00000004386 14802 0.741 - - 0.741 - - - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
26. TRIM55 ENSGALG00000041327 1097 0.74 - - 0.740 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
27. ACTA1 ENSGALG00000011086 2543 0.739 - - 0.739 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
28. NEXN ENSGALG00000008945 1504 0.738 - - 0.738 - - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
29. WWP2 ENSGALG00000000699 5040 0.738 - - - - - - - - 0.738 - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
30. MYH1D ENSGALG00000027323 365 0.736 - - 0.736 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
31. SMOC1 ENSGALG00000009415 2403 0.734 - - 0.734 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
32. MYF5 ENSGALG00000028091 1965 0.733 - - 0.733 - - - - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
33. AHCY ENSGALG00000033677 35555 0.731 - - 0.731 - - - - - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
34. EN1 ENSGALG00000042389 3051 0.73 - - 0.730 - - - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
35. AKR1D1 ENSGALG00000012834 15183 0.727 - - 0.727 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
36. HOXB-7 HOXB-7 2066 0.727 - - - - - - 0.727 - - -
37. SCARA3 ENSGALG00000026651 2559 0.726 - - - - - - - - 0.726 - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
38. USP33 ENSGALG00000008974 447 0.723 - - - - - - 0.723 - - - ubiquitin specific peptidase 33 [Source:HGNC Symbol;Acc:HGNC:20059]
39. MMP24 ENSGALG00000041093 1130 0.72 - - - - - - 0.720 - - - matrix metallopeptidase 24 [Source:HGNC Symbol;Acc:HGNC:7172]
40. CYP1B1 ENSGALG00000025822 3143 0.72 - - 0.720 - - - - - - - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
41. CACNA1G ENSGALG00000007623 1693 0.719 - - - - - 0.719 - - - - calcium voltage-gated channel subunit alpha1 G [Source:HGNC Symbol;Acc:HGNC:1394]
42. LECT1 LECT1 12694 0.718 - - - - - - - - 0.718 -
43. AIF1L ENSGALG00000029834 13866 0.717 - - - - - - 0.717 - - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
44. TBC1D31 ENSGALG00000030460 2027 0.715 - - - - - - - 0.715 - - TBC1 domain family member 31 [Source:HGNC Symbol;Acc:HGNC:30888]
45. RBM24 ENSGALG00000012712 4138 0.714 - - 0.714 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
46. VANGL1 ENSGALG00000015025 67 0.713 - - - - - 0.713 - - - - VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]
47. C3orf38 ENSGALG00000015402 1395 0.713 - - - - - - - 0.713 - - chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:HGNC:28384]
48. MRS2 ENSGALG00000040084 454 0.709 - - - - - - - 0.709 - - MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
49. PAX1 ENSGALG00000039040 3339 0.709 - - - 0.709 - - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
50. CLMP ENSGALG00000006507 8079 0.708 - - - - - - - - 0.708 - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
51. gga-mir-7474 ENSGALG00000033766 5727 0.706 - - 0.706 - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
52. USP8 ENSGALG00000005894 4499 0.704 - - - - - - - 0.704 - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
53. SERPINE2 ENSGALG00000005135 16108 0.703 - - 0.703 - - - - - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
54. FMO3 ENSGALG00000040573 26 0.702 - - - - - - - 0.702 - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA